RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 DCAF15Q66K64 600 aa19.14■□□□□ 0.65
LIG3-215ENST00000592690 MAGEB6Q8N7X4 407 aa19.14■□□□□ 0.65
LIG3-215ENST00000592690 SH3RF3Q8TEJ3 882 aaPredicted RBP19.14■□□□□ 0.65
LIG3-215ENST00000592690 WRNIP1Q96S55 665 aa19.14■□□□□ 0.65
LIG3-215ENST00000592690 NOL10Q9BSC4 688 aaKnown RBP19.14■□□□□ 0.65
LIG3-215ENST00000592690 SUPT16HQ9Y5B9 1047 aaKnown RBP19.14■□□□□ 0.65
LIG3-215ENST00000592690 NAV1Q8NEY1 1877 aa19.14■□□□□ 0.65
LIG3-215ENST00000592690 DDTLA6NHG4 134 aaPredicted RBP19.13■□□□□ 0.65
LIG3-215ENST00000592690 GOLIM4O00461 696 aa19.13■□□□□ 0.65
LIG3-215ENST00000592690 CA12O43570 354 aa19.13■□□□□ 0.65
LIG3-215ENST00000592690 IGSF3O75054 1194 aa19.13■□□□□ 0.65
LIG3-215ENST00000592690 CYP7A1P22680 504 aa19.13■□□□□ 0.65
LIG3-215ENST00000592690 TEX11Q8IYF3 940 aa19.13■□□□□ 0.65
LIG3-215ENST00000592690 CNKSR2Q8WXI2 1034 aa19.13■□□□□ 0.65
LIG3-215ENST00000592690 EDC3Q96F86 508 aaKnown RBP19.13■□□□□ 0.65
LIG3-215ENST00000592690 ZNF341Q9BYN7 854 aa19.13■□□□□ 0.65
LIG3-215ENST00000592690 RNF186Q9NXI6 227 aa19.13■□□□□ 0.65
LIG3-215ENST00000592690 COL2A1P02458 1487 aaPredicted RBP19.12■□□□□ 0.65
LIG3-215ENST00000592690 MAP4K4O95819 1239 aaPredicted RBP19.12■□□□□ 0.65
LIG3-215ENST00000592690 SLURP2P0DP57 97 aa19.12■□□□□ 0.65
LIG3-215ENST00000592690 ZBTB48P10074 688 aaPredicted RBP19.12■□□□□ 0.65
LIG3-215ENST00000592690 ATP5JP18859 108 aa19.12■□□□□ 0.65
LIG3-215ENST00000592690 PPP4CP60510 307 aa19.12■□□□□ 0.65
LIG3-215ENST00000592690 DYNLL1P63167 89 aaKnown RBP19.12■□□□□ 0.65
LIG3-215ENST00000592690 ZSCAN29Q8IWY8 852 aaPredicted RBP19.12■□□□□ 0.65
LIG3-215ENST00000592690 REM2Q8IYK8 340 aaPredicted RBP19.12■□□□□ 0.65
LIG3-215ENST00000592690 ZKSCAN4Q969J2 545 aaPredicted RBP19.12■□□□□ 0.65
LIG3-215ENST00000592690 OPTNQ96CV9 577 aa19.12■□□□□ 0.65
LIG3-215ENST00000592690 BOLA2Q9H3K6 86 aa19.12■□□□□ 0.65
LIG3-215ENST00000592690 PRDM10Q9NQV6 1147 aa19.12■□□□□ 0.65
LIG3-215ENST00000592690 CSADQ9Y600 493 aa19.12■□□□□ 0.65
LIG3-215ENST00000592690 SNCAIPQ9Y6H5 919 aa19.12■□□□□ 0.65
LIG3-215ENST00000592690 PHIPQ8WWQ0 1821 aa19.11■□□□□ 0.65
LIG3-215ENST00000592690 DDX60LQ5H9U9 1706 aaKnown RBP19.11■□□□□ 0.65
LIG3-215ENST00000592690 NPM3O75607 178 aaKnown RBP19.11■□□□□ 0.65
LIG3-215ENST00000592690 TRPA1O75762 1119 aa19.11■□□□□ 0.65
LIG3-215ENST00000592690 BAG3O95817 575 aa19.11■□□□□ 0.65
LIG3-215ENST00000592690 INPP5BP32019 993 aa19.11■□□□□ 0.65
LIG3-215ENST00000592690 MAP3K12Q12852 859 aa19.11■□□□□ 0.65
LIG3-215ENST00000592690 TTF1Q15361 905 aaPredicted RBP19.11■□□□□ 0.65
LIG3-215ENST00000592690 MIGA1Q8NAN2 632 aa19.11■□□□□ 0.65
LIG3-215ENST00000592690 EXOC6Q8TAG9 804 aa19.11■□□□□ 0.65
LIG3-215ENST00000592690 SAGE1Q9NXZ1 904 aa19.11■□□□□ 0.65
LIG3-215ENST00000592690 PTPRFP10586 1907 aa19.1■□□□□ 0.65
LIG3-215ENST00000592690 TM4SF4P48230 202 aa19.1■□□□□ 0.65
LIG3-215ENST00000592690 SREBF2Q12772 1141 aa19.1■□□□□ 0.65
LIG3-215ENST00000592690 HAUS7Q99871 368 aa19.1■□□□□ 0.65
LIG3-215ENST00000592690 OSBPL5Q9H0X9 879 aaPredicted RBP19.1■□□□□ 0.65
LIG3-215ENST00000592690 PAG1Q9NWQ8 432 aa19.1■□□□□ 0.65
LIG3-215ENST00000592690 PDE6AP16499 860 aa19.09■□□□□ 0.65
LIG3-215ENST00000592690 PLCG2P16885 1265 aa19.09■□□□□ 0.65
LIG3-215ENST00000592690 TSHZ3Q63HK5 1081 aa19.09■□□□□ 0.65
LIG3-215ENST00000592690 ECHDC1Q9NTX5 307 aa19.09■□□□□ 0.65
LIG3-215ENST00000592690 ZNF112Q9UJU3 913 aa19.09■□□□□ 0.65
LIG3-215ENST00000592690 FLT1P17948 1338 aa19.08■□□□□ 0.65
LIG3-215ENST00000592690 MANSC4A6NHS7 340 aaPredicted RBP19.08■□□□□ 0.64
LIG3-215ENST00000592690 SPDYE5A6NIY4 337 aa19.08■□□□□ 0.64
LIG3-215ENST00000592690 HDAC1Q13547 482 aaPredicted RBP19.08■□□□□ 0.64
LIG3-215ENST00000592690 MAPKAPK5Q8IW41 473 aa19.08■□□□□ 0.64
LIG3-215ENST00000592690 TGFBRAP1Q8WUH2 860 aa19.08■□□□□ 0.64
LIG3-215ENST00000592690 OTUD5Q96G74 571 aa19.08■□□□□ 0.64
LIG3-215ENST00000592690 BAZ2AQ9UIF9 1905 aaKnown RBP19.08■□□□□ 0.64
LIG3-215ENST00000592690 FAM196BA6NMK8 535 aa19.07■□□□□ 0.64
LIG3-215ENST00000592690 PHF20L1A8MW92 1017 aa19.07■□□□□ 0.64
LIG3-215ENST00000592690 MAP3K10Q02779 954 aa19.07■□□□□ 0.64
LIG3-215ENST00000592690 AAMPQ13685 434 aa19.07■□□□□ 0.64
LIG3-215ENST00000592690 SLC9C2Q5TAH2 1124 aa19.07■□□□□ 0.64
LIG3-215ENST00000592690 TNS4Q8IZW8 715 aa19.07■□□□□ 0.64
LIG3-215ENST00000592690 OTUD7AQ8TE49 926 aaPredicted RBP19.07■□□□□ 0.64
LIG3-215ENST00000592690 ZNF532Q9HCE3 1301 aa19.06■□□□□ 0.64
LIG3-215ENST00000592690 TCRBV5S4A2TA0A5A2 114 aa19.06■□□□□ 0.64
LIG3-215ENST00000592690 IGF2BP3O00425 579 aaKnown RBP eCLIP19.06■□□□□ 0.64
LIG3-215ENST00000592690 SLFNL1Q499Z3 407 aa19.06■□□□□ 0.64
LIG3-215ENST00000592690 TMED8Q6PL24 325 aaPredicted RBP19.06■□□□□ 0.64
LIG3-215ENST00000592690 ERO1BQ86YB8 467 aa19.06■□□□□ 0.64
LIG3-215ENST00000592690 IFNL1Q8IU54 200 aa19.06■□□□□ 0.64
LIG3-215ENST00000592690 MS4A4AQ96JQ5 239 aa19.06■□□□□ 0.64
LIG3-215ENST00000592690 RIOK1Q9BRS2 568 aaKnown RBP19.06■□□□□ 0.64
LIG3-215ENST00000592690 NOL9Q5SY16 702 aaKnown RBP19.05■□□□□ 0.64
LIG3-215ENST00000592690 GPATCH3Q96I76 525 aa19.05■□□□□ 0.64
LIG3-215ENST00000592690 MYH8P13535 1937 aa19.04■□□□□ 0.64
LIG3-215ENST00000592690 TESPA1A2RU30 521 aaPredicted RBP19.04■□□□□ 0.64
LIG3-215ENST00000592690 IRF6O14896 467 aa19.04■□□□□ 0.64
LIG3-215ENST00000592690 TBC1D8O95759 1140 aa19.04■□□□□ 0.64
LIG3-215ENST00000592690 CHGBP05060 677 aa19.04■□□□□ 0.64
LIG3-215ENST00000592690 INHBEP58166 350 aa19.04■□□□□ 0.64
LIG3-215ENST00000592690 IRX6P78412 446 aaPredicted RBP19.04■□□□□ 0.64
LIG3-215ENST00000592690 PPIL2Q13356 520 aa19.04■□□□□ 0.64
LIG3-215ENST00000592690 PTPN18Q99952 460 aa19.04■□□□□ 0.64
LIG3-215ENST00000592690 CCL15-CCL14A0A0B4J2E2 113 aa19.03■□□□□ 0.64
LIG3-215ENST00000592690 MAGEB6P1A0A0J9YX57 407 aa19.03■□□□□ 0.64
LIG3-215ENST00000592690 TBC1D12O60347 775 aa19.03■□□□□ 0.64
LIG3-215ENST00000592690 ADD2P35612 726 aa19.03■□□□□ 0.64
LIG3-215ENST00000592690 GTF2A2P52657 109 aa19.03■□□□□ 0.64
LIG3-215ENST00000592690 CCL15Q16663 113 aa19.03■□□□□ 0.64
LIG3-215ENST00000592690 SLC4A8Q2Y0W8 1093 aa19.03■□□□□ 0.64
LIG3-215ENST00000592690 ANKRD45Q5TZF3 282 aa19.03■□□□□ 0.64
LIG3-215ENST00000592690 CERS3Q8IU89 383 aa19.03■□□□□ 0.64
LIG3-215ENST00000592690 SCYL3Q8IZE3 742 aa19.03■□□□□ 0.64
LIG3-215ENST00000592690 BRI3BPQ8WY22 251 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms