RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 PTCH2Q9Y6C5 1203 aa22.61■■□□□ 1.21
CIRBP-237ENST00000592234 ATRNL1Q5VV63 1379 aa22.61■■□□□ 1.21
CIRBP-237ENST00000592234 ZBED9Q6R2W3 1325 aa22.6■■□□□ 1.21
CIRBP-237ENST00000592234 GPR75-ASB3A0A0A6YYF3 556 aa22.6■■□□□ 1.21
CIRBP-237ENST00000592234 PDHXO00330 501 aa22.6■■□□□ 1.21
CIRBP-237ENST00000592234 ARID4AP29374 1257 aaPredicted RBP22.6■■□□□ 1.21
CIRBP-237ENST00000592234 LACTBP83111 547 aaPredicted RBP22.6■■□□□ 1.21
CIRBP-237ENST00000592234 PRPF38BQ5VTL8 546 aaKnown RBP22.6■■□□□ 1.21
CIRBP-237ENST00000592234 PI16Q6UXB8 463 aa22.6■■□□□ 1.21
CIRBP-237ENST00000592234 SH3BP5LQ7L8J4 393 aa22.6■■□□□ 1.21
CIRBP-237ENST00000592234 PTPRFP10586 1907 aa22.59■■□□□ 1.21
CIRBP-237ENST00000592234 DDTLA6NHG4 134 aaPredicted RBP22.59■■□□□ 1.21
CIRBP-237ENST00000592234 PHF20L1A8MW92 1017 aa22.59■■□□□ 1.21
CIRBP-237ENST00000592234 LDHCP07864 332 aa22.59■■□□□ 1.21
CIRBP-237ENST00000592234 GSTO1P78417 241 aa22.59■■□□□ 1.21
CIRBP-237ENST00000592234 SLC9C1Q4G0N8 1177 aa22.59■■□□□ 1.21
CIRBP-237ENST00000592234 TBC1D9Q6ZT07 1266 aa22.59■■□□□ 1.21
CIRBP-237ENST00000592234 NBPF11Q86T75 865 aa22.59■■□□□ 1.21
CIRBP-237ENST00000592234 FTSJ3Q8IY81 847 aaKnown RBP22.59■■□□□ 1.21
CIRBP-237ENST00000592234 SCYL3Q8IZE3 742 aa22.59■■□□□ 1.21
CIRBP-237ENST00000592234 ARHGAP39Q9C0H5 1083 aa22.59■■□□□ 1.21
CIRBP-237ENST00000592234 PICK1Q9NRD5 415 aa22.59■■□□□ 1.21
CIRBP-237ENST00000592234 RAI14Q9P0K7 980 aa22.59■■□□□ 1.21
CIRBP-237ENST00000592234 CXCL11O14625 94 aa22.58■■□□□ 1.21
CIRBP-237ENST00000592234 UQCRFS1P1P0C7P4 283 aa22.58■■□□□ 1.21
CIRBP-237ENST00000592234 OS9Q13438 667 aaPredicted RBP22.58■■□□□ 1.21
CIRBP-237ENST00000592234 C17orf99Q6UX52 265 aa22.58■■□□□ 1.21
CIRBP-237ENST00000592234 ZNF384Q8TF68 577 aa22.58■■□□□ 1.21
CIRBP-237ENST00000592234 NSUN4Q96CB9 384 aaKnown RBP22.58■■□□□ 1.21
CIRBP-237ENST00000592234 CPA4Q9UI42 421 aa22.58■■□□□ 1.21
CIRBP-237ENST00000592234 PHIPQ8WWQ0 1821 aa22.57■■□□□ 1.2
CIRBP-237ENST00000592234 SLC34A2O95436 690 aa22.57■■□□□ 1.2
CIRBP-237ENST00000592234 GNRH1P01148 92 aa22.57■■□□□ 1.2
CIRBP-237ENST00000592234 MCAMP43121 646 aa22.57■■□□□ 1.2
CIRBP-237ENST00000592234 RHBDL3P58872 404 aa22.57■■□□□ 1.2
CIRBP-237ENST00000592234 MOGSQ13724 837 aa22.57■■□□□ 1.2
CIRBP-237ENST00000592234 POLA2Q14181 598 aa22.57■■□□□ 1.2
CIRBP-237ENST00000592234 ZNF333Q96JL9 665 aa22.57■■□□□ 1.2
CIRBP-237ENST00000592234 TMEM106CQ9BVX2 250 aa22.57■■□□□ 1.2
CIRBP-237ENST00000592234 ZHX2Q9Y6X8 837 aa22.57■■□□□ 1.2
CIRBP-237ENST00000592234 ECM2O94769 699 aaPredicted RBP22.56■■□□□ 1.2
CIRBP-237ENST00000592234 PTPRAP18433 802 aa22.56■■□□□ 1.2
CIRBP-237ENST00000592234 ATP8B2P98198 1209 aa22.56■■□□□ 1.2
CIRBP-237ENST00000592234 MAP3K10Q02779 954 aa22.56■■□□□ 1.2
CIRBP-237ENST00000592234 SSH3Q8TE77 659 aa22.56■■□□□ 1.2
CIRBP-237ENST00000592234 C1orf115Q9H7X2 142 aa22.56■■□□□ 1.2
CIRBP-237ENST00000592234 LRP2BPQ9P2M1 347 aa22.56■■□□□ 1.2
CIRBP-237ENST00000592234 MGAMO43451 1857 aa22.56■■□□□ 1.2
CIRBP-237ENST00000592234 MYO5AQ9Y4I1 1855 aaKnown RBP22.56■■□□□ 1.2
CIRBP-237ENST00000592234 ATAD5Q96QE3 1844 aa22.55■■□□□ 1.2
CIRBP-237ENST00000592234 BRCA2P51587 3418 aa22.55■■□□□ 1.2
CIRBP-237ENST00000592234 CTNND1O60716 968 aaKnown RBP22.55■■□□□ 1.2
CIRBP-237ENST00000592234 MAP4K4O95819 1239 aaPredicted RBP22.55■■□□□ 1.2
CIRBP-237ENST00000592234 SLURP2P0DP57 97 aa22.55■■□□□ 1.2
CIRBP-237ENST00000592234 TNNI3KQ59H18 835 aa22.55■■□□□ 1.2
CIRBP-237ENST00000592234 TTC39AQ5SRH9 613 aa22.55■■□□□ 1.2
CIRBP-237ENST00000592234 ITPRIPQ8IWB1 547 aa22.55■■□□□ 1.2
CIRBP-237ENST00000592234 PARK7Q99497 189 aaKnown RBP22.55■■□□□ 1.2
CIRBP-237ENST00000592234 GPR108Q9NPR9 543 aa22.55■■□□□ 1.2
CIRBP-237ENST00000592234 FPGT-TNNI3KV9GXZ4 949 aa22.55■■□□□ 1.2
CIRBP-237ENST00000592234 MAST2Q6P0Q8 1798 aa22.55■■□□□ 1.2
CIRBP-237ENST00000592234 ADGRA2Q96PE1 1338 aa22.55■■□□□ 1.2
CIRBP-237ENST00000592234 MKI67P46013 3256 aaKnown RBP22.54■■□□□ 1.2
CIRBP-237ENST00000592234 NPM3O75607 178 aaKnown RBP22.54■■□□□ 1.2
CIRBP-237ENST00000592234 SURF6O75683 361 aaKnown RBP22.54■■□□□ 1.2
CIRBP-237ENST00000592234 PRMT2P55345 433 aa22.54■■□□□ 1.2
CIRBP-237ENST00000592234 CCDC158Q5M9N0 1113 aa22.54■■□□□ 1.2
CIRBP-237ENST00000592234 FASTKD5Q7L8L6 764 aaKnown RBP22.54■■□□□ 1.2
CIRBP-237ENST00000592234 A0A0G2JLL6 359 aaPredicted RBP22.53■■□□□ 1.2
CIRBP-237ENST00000592234 EN2P19622 333 aaPredicted RBP22.53■■□□□ 1.2
CIRBP-237ENST00000592234 PSMC4P43686 418 aa22.53■■□□□ 1.2
CIRBP-237ENST00000592234 GPAT2Q6NUI2 795 aa22.53■■□□□ 1.2
CIRBP-237ENST00000592234 PRRT2Q7Z6L0 340 aaPredicted RBP22.53■■□□□ 1.2
CIRBP-237ENST00000592234 NOL10Q9BSC4 688 aaKnown RBP22.53■■□□□ 1.2
CIRBP-237ENST00000592234 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.53■■□□□ 1.28e-8■□□□□ 8.6
CIRBP-237ENST00000592234 SNRKQ9NRH2 765 aa22.53■■□□□ 1.2
CIRBP-237ENST00000592234 AFG3L2Q9Y4W6 797 aa22.53■■□□□ 1.2
CIRBP-237ENST00000592234 CDK5RAP2Q96SN8 1893 aa22.52■■□□□ 1.2
CIRBP-237ENST00000592234 TBC1D12O60347 775 aa22.52■■□□□ 1.2
CIRBP-237ENST00000592234 SLC4A8Q2Y0W8 1093 aa22.52■■□□□ 1.2
CIRBP-237ENST00000592234 GADL1Q6ZQY3 521 aa22.52■■□□□ 1.2
CIRBP-237ENST00000592234 SH3TC2Q8TF17 1288 aa22.52■■□□□ 1.2
CIRBP-237ENST00000592234 DBNDD2Q9BQY9 259 aa22.52■■□□□ 1.2
CIRBP-237ENST00000592234 FMNL1O95466 1100 aaPredicted RBP22.51■■□□□ 1.19
CIRBP-237ENST00000592234 MYCP01106 439 aaPredicted RBP22.51■■□□□ 1.19
CIRBP-237ENST00000592234 CYP2C8P10632 490 aa22.51■■□□□ 1.19
CIRBP-237ENST00000592234 RLBP1P12271 317 aa22.51■■□□□ 1.19
CIRBP-237ENST00000592234 HOXD10P28358 340 aa22.51■■□□□ 1.19
CIRBP-237ENST00000592234 CTGFP29279 349 aa22.51■■□□□ 1.19
CIRBP-237ENST00000592234 TEX11Q8IYF3 940 aa22.51■■□□□ 1.19
CIRBP-237ENST00000592234 OSBPL5Q9H0X9 879 aaPredicted RBP22.51■■□□□ 1.19
CIRBP-237ENST00000592234 COL2A1P02458 1487 aaPredicted RBP22.51■■□□□ 1.19
CIRBP-237ENST00000592234 TRIM75PA6NK02 468 aa22.5■■□□□ 1.19
CIRBP-237ENST00000592234 FAM196BA6NMK8 535 aa22.5■■□□□ 1.19
CIRBP-237ENST00000592234 ZBTB7BO15156 539 aaPredicted RBP22.5■■□□□ 1.19
CIRBP-237ENST00000592234 NAA16Q6N069 864 aaPredicted RBP22.5■■□□□ 1.19
CIRBP-237ENST00000592234 TRIM47Q96LD4 638 aa22.5■■□□□ 1.19
CIRBP-237ENST00000592234 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.5■■□□□ 1.19
CIRBP-237ENST00000592234 SRRDQ9UH36 339 aa22.5■■□□□ 1.19
CIRBP-237ENST00000592234 FOCADQ5VW36 1801 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms