RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 NOL9Q5SY16 702 aaKnown RBP22.08■■□□□ 1.13
VAT1-208ENST00000590924 SLF2Q8IX21 1173 aa22.08■■□□□ 1.13
VAT1-208ENST00000590924 FAM163AQ96GL9 167 aaPredicted RBP22.08■■□□□ 1.13
VAT1-208ENST00000590924 CRBNQ96SW2 442 aa22.08■■□□□ 1.13
VAT1-208ENST00000590924 ABCF2Q9UG63 623 aa22.08■■□□□ 1.13
VAT1-208ENST00000590924 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.08■■□□□ 1.13
VAT1-208ENST00000590924 ATRNL1Q5VV63 1379 aa22.08■■□□□ 1.12
VAT1-208ENST00000590924 TLR2O60603 784 aa22.07■■□□□ 1.12
VAT1-208ENST00000590924 ENTPD3O75355 529 aa22.07■■□□□ 1.12
VAT1-208ENST00000590924 SPTY2D1Q68D10 685 aaPredicted RBP22.07■■□□□ 1.12
VAT1-208ENST00000590924 SSH3Q8TE77 659 aa22.07■■□□□ 1.12
VAT1-208ENST00000590924 ARMC5Q96C12 935 aa22.07■■□□□ 1.12
VAT1-208ENST00000590924 KCNH4Q9UQ05 1017 aa22.07■■□□□ 1.12
VAT1-208ENST00000590924 BRCA2P51587 3418 aa22.06■■□□□ 1.12
VAT1-208ENST00000590924 FOCADQ5VW36 1801 aa22.06■■□□□ 1.12
VAT1-208ENST00000590924 RGS3P49796 1198 aa22.06■■□□□ 1.12
VAT1-208ENST00000590924 POLA2Q14181 598 aa22.06■■□□□ 1.12
VAT1-208ENST00000590924 CEP85Q6P2H3 762 aa22.06■■□□□ 1.12
VAT1-208ENST00000590924 C1orf115Q9H7X2 142 aa22.06■■□□□ 1.12
VAT1-208ENST00000590924 PNMA6EA0A0J9YXQ4 647 aa22.05■■□□□ 1.12
VAT1-208ENST00000590924 SLC34A2O95436 690 aa22.05■■□□□ 1.12
VAT1-208ENST00000590924 ZFPM1Q8IX07 1006 aa22.05■■□□□ 1.12
VAT1-208ENST00000590924 NEUROD6Q96NK8 337 aa22.05■■□□□ 1.12
VAT1-208ENST00000590924 MKI67P46013 3256 aaKnown RBP22.05■■□□□ 1.12
VAT1-208ENST00000590924 MROH7-TTC4A0A0A0MT08 1334 aa22.05■■□□□ 1.12
VAT1-208ENST00000590924 PRPF38BQ5VTL8 546 aaKnown RBP22.04■■□□□ 1.12
VAT1-208ENST00000590924 ERICH6Q7L0X2 663 aa22.04■■□□□ 1.12
VAT1-208ENST00000590924 ARID4AP29374 1257 aaPredicted RBP22.03■■□□□ 1.12
VAT1-208ENST00000590924 BTDP43251 543 aa22.03■■□□□ 1.12
VAT1-208ENST00000590924 MECOMQ03112 1051 aa22.03■■□□□ 1.12
VAT1-208ENST00000590924 ANKRD23Q86SG2 305 aa22.03■■□□□ 1.12
VAT1-208ENST00000590924 HMG20BQ9P0W2 317 aa22.03■■□□□ 1.12
VAT1-208ENST00000590924 POTEFA5A3E0 1075 aa22.02■■□□□ 1.12
VAT1-208ENST00000590924 PHF20L1A8MW92 1017 aa22.02■■□□□ 1.12
VAT1-208ENST00000590924 HMMRO75330 724 aa22.02■■□□□ 1.12
VAT1-208ENST00000590924 LACTBP83111 547 aaPredicted RBP22.02■■□□□ 1.12
VAT1-208ENST00000590924 MAP3K10Q02779 954 aa22.02■■□□□ 1.12
VAT1-208ENST00000590924 G3BP1Q13283 466 aaKnown RBP eCLIP22.02■■□□□ 1.129e-7■□□□□ 10.9
VAT1-208ENST00000590924 SH3BP5LQ7L8J4 393 aa22.02■■□□□ 1.12
VAT1-208ENST00000590924 ZNF384Q8TF68 577 aa22.02■■□□□ 1.12
VAT1-208ENST00000590924 GPR75-ASB3A0A0A6YYF3 556 aa22.01■■□□□ 1.11
VAT1-208ENST00000590924 MOGSQ13724 837 aa22.01■■□□□ 1.11
VAT1-208ENST00000590924 KIF22Q14807 665 aa22.01■■□□□ 1.11
VAT1-208ENST00000590924 GORABQ5T7V8 394 aa22.01■■□□□ 1.11
VAT1-208ENST00000590924 ZSCAN29Q8IWY8 852 aaPredicted RBP22.01■■□□□ 1.11
VAT1-208ENST00000590924 SCYL3Q8IZE3 742 aa22.01■■□□□ 1.11
VAT1-208ENST00000590924 SPATA5Q8NB90 893 aa22.01■■□□□ 1.11
VAT1-208ENST00000590924 DDX4Q9NQI0 724 aaKnown RBP22.01■■□□□ 1.11
VAT1-208ENST00000590924 PTCH2Q9Y6C5 1203 aa22.01■■□□□ 1.11
VAT1-208ENST00000590924 COL2A1P02458 1487 aaPredicted RBP22.01■■□□□ 1.11
VAT1-208ENST00000590924 ADGRA2Q96PE1 1338 aa22.01■■□□□ 1.11
VAT1-208ENST00000590924 SIPA1L1O43166 1804 aa22.01■■□□□ 1.11
VAT1-208ENST00000590924 PDHXO00330 501 aa22■■□□□ 1.11
VAT1-208ENST00000590924 CXCL11O14625 94 aa22■■□□□ 1.11
VAT1-208ENST00000590924 NPM3O75607 178 aaKnown RBP22■■□□□ 1.11
VAT1-208ENST00000590924 GNRH1P01148 92 aa22■■□□□ 1.11
VAT1-208ENST00000590924 RHBDL3P58872 404 aa22■■□□□ 1.11
VAT1-208ENST00000590924 C17orf99Q6UX52 265 aa22■■□□□ 1.11
VAT1-208ENST00000590924 PI16Q6UXB8 463 aa22■■□□□ 1.11
VAT1-208ENST00000590924 ZNF333Q96JL9 665 aa22■■□□□ 1.11
VAT1-208ENST00000590924 NOP58Q9Y2X3 529 aaKnown RBP22■■□□□ 1.11
VAT1-208ENST00000590924 DDTLA6NHG4 134 aaPredicted RBP21.99■■□□□ 1.11
VAT1-208ENST00000590924 MAP4K4O95819 1239 aaPredicted RBP21.99■■□□□ 1.11
VAT1-208ENST00000590924 MCAMP43121 646 aa21.99■■□□□ 1.11
VAT1-208ENST00000590924 GSTO1P78417 241 aa21.99■■□□□ 1.11
VAT1-208ENST00000590924 SLC9C1Q4G0N8 1177 aa21.99■■□□□ 1.11
VAT1-208ENST00000590924 SIRT2Q8IXJ6 389 aa21.99■■□□□ 1.11
VAT1-208ENST00000590924 EXOC6Q8TAG9 804 aa21.99■■□□□ 1.11
VAT1-208ENST00000590924 NSUN4Q96CB9 384 aaKnown RBP21.99■■□□□ 1.11
VAT1-208ENST00000590924 ARHGAP39Q9C0H5 1083 aa21.99■■□□□ 1.11
VAT1-208ENST00000590924 LOC285556D6RIA3 1793 aa21.99■■□□□ 1.11
VAT1-208ENST00000590924 DOCK3Q8IZD9 2030 aa21.99■■□□□ 1.11
VAT1-208ENST00000590924 LDHCP07864 332 aa21.98■■□□□ 1.11
VAT1-208ENST00000590924 UQCRFS1P1P0C7P4 283 aa21.98■■□□□ 1.11
VAT1-208ENST00000590924 PICALMQ13492 652 aa21.98■■□□□ 1.11
VAT1-208ENST00000590924 NBPF11Q86T75 865 aa21.98■■□□□ 1.11
VAT1-208ENST00000590924 GPR108Q9NPR9 543 aa21.98■■□□□ 1.11
VAT1-208ENST00000590924 PICK1Q9NRD5 415 aa21.98■■□□□ 1.11
VAT1-208ENST00000590924 PTPRAP18433 802 aa21.97■■□□□ 1.11
VAT1-208ENST00000590924 PRMT2P55345 433 aa21.97■■□□□ 1.11
VAT1-208ENST00000590924 HSP90AB4PQ58FF6 505 aa21.97■■□□□ 1.11
VAT1-208ENST00000590924 CPA4Q9UI42 421 aa21.97■■□□□ 1.11
VAT1-208ENST00000590924 A0A0G2JLL6 359 aaPredicted RBP21.96■■□□□ 1.11
VAT1-208ENST00000590924 CTNND1O60716 968 aaKnown RBP21.96■■□□□ 1.11
VAT1-208ENST00000590924 GPAT2Q6NUI2 795 aa21.96■■□□□ 1.11
VAT1-208ENST00000590924 TBC1D9Q6ZT07 1266 aa21.96■■□□□ 1.11
VAT1-208ENST00000590924 PRRT2Q7Z6L0 340 aaPredicted RBP21.96■■□□□ 1.11
VAT1-208ENST00000590924 PARK7Q99497 189 aaKnown RBP21.96■■□□□ 1.11
VAT1-208ENST00000590924 RAI14Q9P0K7 980 aa21.96■■□□□ 1.11
VAT1-208ENST00000590924 AFG3L2Q9Y4W6 797 aa21.96■■□□□ 1.11
VAT1-208ENST00000590924 PCDHB15Q9Y5E8 787 aa21.96■■□□□ 1.11
VAT1-208ENST00000590924 ZHX2Q9Y6X8 837 aa21.96■■□□□ 1.11
VAT1-208ENST00000590924 TBC1D12O60347 775 aa21.95■■□□□ 1.1
VAT1-208ENST00000590924 SURF6O75683 361 aaKnown RBP21.95■■□□□ 1.1
VAT1-208ENST00000590924 TNNI3KQ59H18 835 aa21.95■■□□□ 1.1
VAT1-208ENST00000590924 TMEM106CQ9BVX2 250 aa21.95■■□□□ 1.1
VAT1-208ENST00000590924 FPGT-TNNI3KV9GXZ4 949 aa21.95■■□□□ 1.1
VAT1-208ENST00000590924 MYH1P12882 1939 aa21.95■■□□□ 1.1
VAT1-208ENST00000590924 FASTKD5Q7L8L6 764 aaKnown RBP21.94■■□□□ 1.1
VAT1-208ENST00000590924 LRP2BPQ9P2M1 347 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms