RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 ATP2B4P23634 1241 aa8.89□□□□□ -0.99
SMAD4-210ENST00000590061 YY1P25490 414 aa8.89□□□□□ -0.99
SMAD4-210ENST00000590061 PDE1AP54750 535 aa8.89□□□□□ -0.99
SMAD4-210ENST00000590061 TTF1Q15361 905 aaPredicted RBP8.89□□□□□ -0.99
SMAD4-210ENST00000590061 ATG9AQ7Z3C6 839 aa8.89□□□□□ -0.99
SMAD4-210ENST00000590061 VPS37DQ86XT2 251 aa8.89□□□□□ -0.99
SMAD4-210ENST00000590061 C2CD5Q86YS7 1000 aa8.89□□□□□ -0.99
SMAD4-210ENST00000590061 SP8Q8IXZ3 490 aa8.89□□□□□ -0.99
SMAD4-210ENST00000590061 CNTROBQ8N137 903 aa8.89□□□□□ -0.99
SMAD4-210ENST00000590061 NEUROD6Q96NK8 337 aa8.89□□□□□ -0.99
SMAD4-210ENST00000590061 EYA3Q99504 573 aa8.89□□□□□ -0.99
SMAD4-210ENST00000590061 VPS33BQ9H267 617 aa8.89□□□□□ -0.99
SMAD4-210ENST00000590061 MAP10Q9P2G4 905 aa8.89□□□□□ -0.99
SMAD4-210ENST00000590061 SASH1O94885 1247 aa8.88□□□□□ -0.99
SMAD4-210ENST00000590061 RGS3P49796 1198 aa8.88□□□□□ -0.99
SMAD4-210ENST00000590061 TFCP2Q12800 502 aa8.88□□□□□ -0.99
SMAD4-210ENST00000590061 CTC1Q2NKJ3 1217 aa8.88□□□□□ -0.99
SMAD4-210ENST00000590061 ZNF787Q6DD87 383 aa8.88□□□□□ -0.99
SMAD4-210ENST00000590061 ZSCAN25Q6NSZ9 544 aa8.88□□□□□ -0.99
SMAD4-210ENST00000590061 PLEKHM2Q8IWE5 1019 aa8.88□□□□□ -0.99
SMAD4-210ENST00000590061 RTKN2Q8IZC4 609 aa8.88□□□□□ -0.99
SMAD4-210ENST00000590061 SYNE4Q8N205 404 aa8.88□□□□□ -0.99
SMAD4-210ENST00000590061 RUFY2Q8WXA3 655 aa8.88□□□□□ -0.99
SMAD4-210ENST00000590061 EVI5LQ96CN4 794 aa8.88□□□□□ -0.99
SMAD4-210ENST00000590061 FAM117AQ9C073 453 aa8.88□□□□□ -0.99
SMAD4-210ENST00000590061 ANKIB1Q9P2G1 1089 aa8.88□□□□□ -0.99
SMAD4-210ENST00000590061 DACH1Q9UI36 760 aa8.88□□□□□ -0.99
SMAD4-210ENST00000590061 PA2G4Q9UQ80 394 aaKnown RBP8.88□□□□□ -0.99
SMAD4-210ENST00000590061 ATP6V0A2Q9Y487 856 aa8.88□□□□□ -0.99
SMAD4-210ENST00000590061 NRXN2Q9P2S2 1712 aa8.88□□□□□ -0.99
SMAD4-210ENST00000590061 TUBGCP6Q96RT7 1819 aa8.87□□□□□ -0.99
SMAD4-210ENST00000590061 A0A1B0GUL7 405 aa8.87□□□□□ -0.99
SMAD4-210ENST00000590061 EPB41L2O43491 1005 aaKnown RBP8.87□□□□□ -0.99
SMAD4-210ENST00000590061 MFAP1P55081 439 aaKnown RBP8.87□□□□□ -0.99
SMAD4-210ENST00000590061 CHRNDQ07001 517 aa8.87□□□□□ -0.99
SMAD4-210ENST00000590061 LINC01559Q495D7 138 aa8.87□□□□□ -0.99
SMAD4-210ENST00000590061 TTC22Q5TAA0 569 aa8.87□□□□□ -0.99
SMAD4-210ENST00000590061 C15orf52Q6ZUT6 534 aaKnown RBP8.87□□□□□ -0.99
SMAD4-210ENST00000590061 ZGPATQ8N5A5 531 aaKnown RBP8.87□□□□□ -0.99
SMAD4-210ENST00000590061 TTLL6Q8N841 843 aa8.87□□□□□ -0.99
SMAD4-210ENST00000590061 ZNF511Q8NB15 262 aa8.87□□□□□ -0.99
SMAD4-210ENST00000590061 CCDC85AQ96PX6 553 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-210ENST00000590061 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.87□□□□□ -0.99
SMAD4-210ENST00000590061 IL1RAPL2Q9NP60 686 aa8.87□□□□□ -0.99
SMAD4-210ENST00000590061 GGA1Q9UJY5 639 aa8.87□□□□□ -0.99
SMAD4-210ENST00000590061 MINPP1Q9UNW1 487 aa8.87□□□□□ -0.99
SMAD4-210ENST00000590061 DDX60Q8IY21 1712 aaKnown RBP8.87□□□□□ -0.99
SMAD4-210ENST00000590061 PDS5AQ29RF7 1337 aaKnown RBP8.86□□□□□ -0.99
SMAD4-210ENST00000590061 ZFYP08048 801 aaPredicted RBP8.86□□□□□ -0.99
SMAD4-210ENST00000590061 LRRC24Q50LG9 513 aa8.86□□□□□ -0.99
SMAD4-210ENST00000590061 SH3D19Q5HYK7 790 aa8.86□□□□□ -0.99
SMAD4-210ENST00000590061 TTC39AQ5SRH9 613 aa8.86□□□□□ -0.99
SMAD4-210ENST00000590061 MSL1Q68DK7 614 aa8.86□□□□□ -0.99
SMAD4-210ENST00000590061 SMIM5Q71RC9 77 aa8.86□□□□□ -0.99
SMAD4-210ENST00000590061 ZNF804AQ7Z570 1209 aa8.86□□□□□ -0.99
SMAD4-210ENST00000590061 KLHDC4Q8TBB5 520 aa8.86□□□□□ -0.99
SMAD4-210ENST00000590061 BAP1Q92560 729 aa8.86□□□□□ -0.99
SMAD4-210ENST00000590061 ZNF622Q969S3 477 aaKnown RBP eCLIP8.86□□□□□ -0.99
SMAD4-210ENST00000590061 EAF2Q96CJ1 260 aaPredicted RBP8.86□□□□□ -0.99
SMAD4-210ENST00000590061 ZNF594Q96JF6 807 aaPredicted RBP8.86□□□□□ -0.99
SMAD4-210ENST00000590061 SEC31BQ9NQW1 1179 aa8.86□□□□□ -0.99
SMAD4-210ENST00000590061 PIM2Q9P1W9 311 aa8.86□□□□□ -0.99
SMAD4-210ENST00000590061 RFX7Q2KHR2 1363 aa8.86□□□□□ -0.99
SMAD4-210ENST00000590061 ZNF804BA4D1E1 1349 aa8.85□□□□□ -0.99
SMAD4-210ENST00000590061 SMARCA5O60264 1052 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-210ENST00000590061 CDC45O75419 566 aa8.85□□□□□ -0.99
SMAD4-210ENST00000590061 REC8O95072 547 aa8.85□□□□□ -0.99
SMAD4-210ENST00000590061 FGFR2P21802 821 aa8.85□□□□□ -0.99
SMAD4-210ENST00000590061 MMP14P50281 582 aa8.85□□□□□ -0.99
SMAD4-210ENST00000590061 SPTY2D1Q68D10 685 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-210ENST00000590061 CERS3Q8IU89 383 aa8.85□□□□□ -0.99
SMAD4-210ENST00000590061 MPNDQ8N594 471 aa8.85□□□□□ -0.99
SMAD4-210ENST00000590061 VGLL2Q8N8G2 317 aa8.85□□□□□ -0.99
SMAD4-210ENST00000590061 EHBP1Q8NDI1 1231 aa8.85□□□□□ -0.99
SMAD4-210ENST00000590061 HPS1Q92902 700 aa8.85□□□□□ -0.99
SMAD4-210ENST00000590061 XAGE2Q96GT9 111 aa8.85□□□□□ -0.99
SMAD4-210ENST00000590061 HAUS7Q99871 368 aa8.85□□□□□ -0.99
SMAD4-210ENST00000590061 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.85□□□□□ -0.99
SMAD4-210ENST00000590061 ZC3H12CQ9C0D7 883 aaKnown RBP8.85□□□□□ -0.99
SMAD4-210ENST00000590061 POLR3EQ9NVU0 708 aa8.85□□□□□ -0.99
SMAD4-210ENST00000590061 DENND2AQ9ULE3 1009 aa8.85□□□□□ -0.99
SMAD4-210ENST00000590061 C10orf71Q711Q0 1435 aa8.85□□□□□ -0.99
SMAD4-210ENST00000590061 AXIN1O15169 862 aa8.84□□□□□ -0.99
SMAD4-210ENST00000590061 FRAT2O75474 233 aaPredicted RBP8.84□□□□□ -0.99
SMAD4-210ENST00000590061 ZBTB7AO95365 584 aa8.84□□□□□ -0.99
SMAD4-210ENST00000590061 HIBADHP31937 336 aaKnown RBP8.84□□□□□ -0.99
SMAD4-210ENST00000590061 TIMM10P62072 90 aa8.84□□□□□ -0.99
SMAD4-210ENST00000590061 DALRD3Q5D0E6 543 aaKnown RBP8.84□□□□□ -0.99
SMAD4-210ENST00000590061 DPP8Q6V1X1 898 aaPredicted RBP8.84□□□□□ -0.99
SMAD4-210ENST00000590061 TBC1D22AQ8WUA7 517 aa8.84□□□□□ -0.99
SMAD4-210ENST00000590061 CELF1Q92879 486 aaKnown RBP8.84□□□□□ -0.99
SMAD4-210ENST00000590061 DDRGK1Q96HY6 314 aa8.84□□□□□ -0.99
SMAD4-210ENST00000590061 PUS3Q9BZE2 481 aaKnown RBP8.84□□□□□ -0.99
SMAD4-210ENST00000590061 PPP1R1BQ9UD71 204 aaPredicted RBP8.84□□□□□ -0.99
SMAD4-210ENST00000590061 DBNLQ9UJU6 430 aaKnown RBP8.84□□□□□ -0.99
SMAD4-210ENST00000590061 NSFL1CQ9UNZ2 370 aaKnown RBP8.84□□□□□ -0.99
SMAD4-210ENST00000590061 SALL3Q9BXA9 1300 aa8.83□□□□□ -1
SMAD4-210ENST00000590061 ZNF609O15014 1411 aa8.83□□□□□ -1
SMAD4-210ENST00000590061 ARID4AP29374 1257 aaPredicted RBP8.83□□□□□ -1
SMAD4-210ENST00000590061 MAP3K12Q12852 859 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms