RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 ANGEL1Q9UNK9 670 aaKnown RBP21.23■□□□□ 0.99
DNMT1-215ENST00000588913 TTC41PQ6P2S7 1318 aa21.23■□□□□ 0.99
DNMT1-215ENST00000588913 FAM155AB1AL88 458 aaPredicted RBP21.23■□□□□ 0.99
DNMT1-215ENST00000588913 PDE1AP54750 535 aa21.23■□□□□ 0.99
DNMT1-215ENST00000588913 MAP3K12Q12852 859 aa21.23■□□□□ 0.99
DNMT1-215ENST00000588913 RIOK1Q9BRS2 568 aaKnown RBP21.23■□□□□ 0.99
DNMT1-215ENST00000588913 STAP2Q9UGK3 403 aa21.23■□□□□ 0.99
DNMT1-215ENST00000588913 RPAP1Q9BWH6 1393 aaPredicted RBP21.22■□□□□ 0.99
DNMT1-215ENST00000588913 TNNI2P48788 182 aa21.22■□□□□ 0.99
DNMT1-215ENST00000588913 TTLL12Q14166 644 aaPredicted RBP21.22■□□□□ 0.99
DNMT1-215ENST00000588913 TTF1Q15361 905 aaPredicted RBP21.22■□□□□ 0.99
DNMT1-215ENST00000588913 PAXIP1Q6ZW49 1069 aaPredicted RBP21.22■□□□□ 0.99
DNMT1-215ENST00000588913 TEX11Q8IYF3 940 aa21.22■□□□□ 0.99
DNMT1-215ENST00000588913 WDR33Q9C0J8 1336 aaKnown RBP21.21■□□□□ 0.99
DNMT1-215ENST00000588913 ADD2P35612 726 aa21.21■□□□□ 0.99
DNMT1-215ENST00000588913 LDLRAD1Q5T700 205 aa21.21■□□□□ 0.99
DNMT1-215ENST00000588913 MIGA2Q7L4E1 593 aa21.21■□□□□ 0.99
DNMT1-215ENST00000588913 DDX60LQ5H9U9 1706 aaKnown RBP21.21■□□□□ 0.99
DNMT1-215ENST00000588913 RGMBQ6NW40 437 aa21.2■□□□□ 0.99
DNMT1-215ENST00000588913 PLEKHM2Q8IWE5 1019 aa21.2■□□□□ 0.99
DNMT1-215ENST00000588913 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.2■□□□□ 0.99
DNMT1-215ENST00000588913 ENTPD3O75355 529 aa21.2■□□□□ 0.98
DNMT1-215ENST00000588913 FKBP1BP68106 108 aa21.2■□□□□ 0.98
DNMT1-215ENST00000588913 MAP3K11Q16584 847 aa21.2■□□□□ 0.98
DNMT1-215ENST00000588913 SUPT20HL1Q3ZLR7 823 aa21.2■□□□□ 0.98
DNMT1-215ENST00000588913 SKAP1Q86WV1 359 aa21.2■□□□□ 0.98
DNMT1-215ENST00000588913 JMYQ8N9B5 988 aa21.2■□□□□ 0.98
DNMT1-215ENST00000588913 HHIPL1Q96JK4 782 aa21.2■□□□□ 0.98
DNMT1-215ENST00000588913 NF2P35240 595 aa21.19■□□□□ 0.98
DNMT1-215ENST00000588913 EVX2Q03828 476 aa21.19■□□□□ 0.98
DNMT1-215ENST00000588913 RASAL3Q86YV0 1011 aa21.19■□□□□ 0.98
DNMT1-215ENST00000588913 MAPKAPK5Q8IW41 473 aa21.19■□□□□ 0.98
DNMT1-215ENST00000588913 LCORLQ8N3X6 602 aa21.19■□□□□ 0.98
DNMT1-215ENST00000588913 TGFBRAP1Q8WUH2 860 aa21.19■□□□□ 0.98
DNMT1-215ENST00000588913 GPATCH3Q96I76 525 aa21.19■□□□□ 0.98
DNMT1-215ENST00000588913 GLRX3O76003 335 aaKnown RBP21.18■□□□□ 0.98
DNMT1-215ENST00000588913 KBTBD3Q8NAB2 608 aa21.18■□□□□ 0.98
DNMT1-215ENST00000588913 MYH1P12882 1939 aa21.18■□□□□ 0.98
DNMT1-215ENST00000588913 NAV1Q8NEY1 1877 aa21.18■□□□□ 0.98
DNMT1-215ENST00000588913 FLT1P17948 1338 aa21.18■□□□□ 0.98
DNMT1-215ENST00000588913 FAM196BA6NMK8 535 aa21.18■□□□□ 0.98
DNMT1-215ENST00000588913 ZNF157P51786 506 aaPredicted RBP21.18■□□□□ 0.98
DNMT1-215ENST00000588913 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.18■□□□□ 0.98
DNMT1-215ENST00000588913 OSBPL5Q9H0X9 879 aaPredicted RBP21.18■□□□□ 0.98
DNMT1-215ENST00000588913 BAG3O95817 575 aa21.17■□□□□ 0.98
DNMT1-215ENST00000588913 SLC4A8Q2Y0W8 1093 aa21.17■□□□□ 0.98
DNMT1-215ENST00000588913 ARMC9Q7Z3E5 817 aa21.17■□□□□ 0.98
DNMT1-215ENST00000588913 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.17■□□□□ 0.98
DNMT1-215ENST00000588913 CNKSR2Q8WXI2 1034 aa21.17■□□□□ 0.98
DNMT1-215ENST00000588913 PUS7LQ9H0K6 701 aaKnown RBP21.17■□□□□ 0.98
DNMT1-215ENST00000588913 ARMT1Q9H993 441 aa21.17■□□□□ 0.98
DNMT1-215ENST00000588913 PRKAB2O43741 272 aa21.16■□□□□ 0.98
DNMT1-215ENST00000588913 IGSF3O75054 1194 aa21.16■□□□□ 0.98
DNMT1-215ENST00000588913 SLC10A3P09131 477 aa21.16■□□□□ 0.98
DNMT1-215ENST00000588913 GJA5P36382 358 aa21.16■□□□□ 0.98
DNMT1-215ENST00000588913 MAGEB6P1A0A0J9YX57 407 aa21.15■□□□□ 0.98
DNMT1-215ENST00000588913 PPP1R12BO60237 982 aaPredicted RBP21.15■□□□□ 0.98
DNMT1-215ENST00000588913 NPM3O75607 178 aaKnown RBP21.15■□□□□ 0.98
DNMT1-215ENST00000588913 INPP5BP32019 993 aa21.15■□□□□ 0.98
DNMT1-215ENST00000588913 MKRN3Q13064 507 aaKnown RBP21.15■□□□□ 0.98
DNMT1-215ENST00000588913 BECN1Q14457 450 aa21.15■□□□□ 0.98
DNMT1-215ENST00000588913 CSRNP1Q96S65 589 aa21.15■□□□□ 0.98
DNMT1-215ENST00000588913 SAP30BPQ9UHR5 308 aaKnown RBP21.15■□□□□ 0.98
DNMT1-215ENST00000588913 BAZ2AQ9UIF9 1905 aaKnown RBP21.15■□□□□ 0.98
DNMT1-215ENST00000588913 ERC2O15083 957 aa21.15■□□□□ 0.98
DNMT1-215ENST00000588913 MBD4O95243 580 aa21.15■□□□□ 0.98
DNMT1-215ENST00000588913 UBE3CQ15386 1083 aa21.15■□□□□ 0.98
DNMT1-215ENST00000588913 ZKSCAN4Q969J2 545 aaPredicted RBP21.15■□□□□ 0.98
DNMT1-215ENST00000588913 OSBP2Q969R2 916 aa21.15■□□□□ 0.98
DNMT1-215ENST00000588913 SEC62Q99442 399 aaKnown RBP21.15■□□□□ 0.98
DNMT1-215ENST00000588913 NOL10Q9BSC4 688 aaKnown RBP21.15■□□□□ 0.98
DNMT1-215ENST00000588913 COL2A1P02458 1487 aaPredicted RBP21.14■□□□□ 0.98
DNMT1-215ENST00000588913 SMIM22K7EJ46 135 aa21.14■□□□□ 0.97
DNMT1-215ENST00000588913 VGLL4Q14135 290 aa21.14■□□□□ 0.97
DNMT1-215ENST00000588913 RRP1BQ14684 758 aaKnown RBP21.14■□□□□ 0.97
DNMT1-215ENST00000588913 NFKBIBQ15653 356 aa21.14■□□□□ 0.97
DNMT1-215ENST00000588913 ZSCAN29Q8IWY8 852 aaPredicted RBP21.14■□□□□ 0.97
DNMT1-215ENST00000588913 SDR42E1Q8WUS8 393 aa21.14■□□□□ 0.97
DNMT1-215ENST00000588913 PALD1Q9ULE6 856 aa21.14■□□□□ 0.97
DNMT1-215ENST00000588913 LAMB1P07942 1786 aa21.13■□□□□ 0.97
DNMT1-215ENST00000588913 PHF20L1A8MW92 1017 aa21.13■□□□□ 0.97
DNMT1-215ENST00000588913 GSE1Q14687 1217 aa21.13■□□□□ 0.97
DNMT1-215ENST00000588913 DNAJC18Q9H819 358 aa21.13■□□□□ 0.97
DNMT1-215ENST00000588913 ELP3Q9H9T3 547 aa21.13■□□□□ 0.97
DNMT1-215ENST00000588913 SNCAIPQ9Y6H5 919 aa21.13■□□□□ 0.97
DNMT1-215ENST00000588913 M0R2C6 588 aa21.13■□□□□ 0.97
DNMT1-215ENST00000588913 PLCG2P16885 1265 aa21.13■□□□□ 0.97
DNMT1-215ENST00000588913 IREB2P48200 963 aaKnown RBP21.13■□□□□ 0.97
DNMT1-215ENST00000588913 MAP3K10Q02779 954 aa21.13■□□□□ 0.97
DNMT1-215ENST00000588913 WRNIP1Q96S55 665 aa21.13■□□□□ 0.97
DNMT1-215ENST00000588913 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.13■□□□□ 0.971e-6■■■■■ 27
DNMT1-215ENST00000588913 OSBPL3Q9H4L5 887 aa21.13■□□□□ 0.97
DNMT1-215ENST00000588913 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.13■□□□□ 0.97
DNMT1-215ENST00000588913 ZNF112Q9UJU3 913 aa21.13■□□□□ 0.97
DNMT1-215ENST00000588913 RNF113AO15541 343 aaKnown RBP21.12■□□□□ 0.97
DNMT1-215ENST00000588913 ECE1P42892 770 aa21.12■□□□□ 0.97
DNMT1-215ENST00000588913 UPF2Q9HAU5 1272 aaKnown RBP21.12■□□□□ 0.97
DNMT1-215ENST00000588913 MAP3K9P80192 1104 aa21.11■□□□□ 0.97
DNMT1-215ENST00000588913 KIF23Q02241 960 aaPredicted RBP21.11■□□□□ 0.97
DNMT1-215ENST00000588913 SHROOM1Q2M3G4 852 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms