RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 TMED8Q6PL24 325 aaPredicted RBP10.54□□□□□ -0.72
ATG4D-202ENST00000585437 SH3BP5LQ7L8J4 393 aa10.54□□□□□ -0.72
ATG4D-202ENST00000585437 ZFPM1Q8IX07 1006 aa10.54□□□□□ -0.72
ATG4D-202ENST00000585437 CFHR5Q9BXR6 569 aa10.54□□□□□ -0.72
ATG4D-202ENST00000585437 LRRCC1Q9C099 1032 aa10.54□□□□□ -0.72
ATG4D-202ENST00000585437 DCTPP1Q9H773 170 aa10.54□□□□□ -0.72
ATG4D-202ENST00000585437 LRP2BPQ9P2M1 347 aa10.54□□□□□ -0.72
ATG4D-202ENST00000585437 ZNF112Q9UJU3 913 aa10.54□□□□□ -0.72
ATG4D-202ENST00000585437 SPDYE5A6NIY4 337 aa10.53□□□□□ -0.72
ATG4D-202ENST00000585437 APBB1O00213 710 aa10.53□□□□□ -0.72
ATG4D-202ENST00000585437 TCP10Q12799 353 aa10.53□□□□□ -0.72
ATG4D-202ENST00000585437 DCAF15Q66K64 600 aa10.53□□□□□ -0.72
ATG4D-202ENST00000585437 NAA16Q6N069 864 aaPredicted RBP10.53□□□□□ -0.72
ATG4D-202ENST00000585437 CCDC136Q96JN2 1154 aa10.53□□□□□ -0.72
ATG4D-202ENST00000585437 CRBNQ96SW2 442 aa10.53□□□□□ -0.72
ATG4D-202ENST00000585437 ZNF341Q9BYN7 854 aa10.53□□□□□ -0.72
ATG4D-202ENST00000585437 ANTXR1Q9H6X2 564 aa10.53□□□□□ -0.72
ATG4D-202ENST00000585437 RNF186Q9NXI6 227 aa10.53□□□□□ -0.72
ATG4D-202ENST00000585437 SNCAIPQ9Y6H5 919 aa10.53□□□□□ -0.72
ATG4D-202ENST00000585437 NDUFB9Q9Y6M9 179 aa10.53□□□□□ -0.72
ATG4D-202ENST00000585437 ZSWIM8A7E2V4 1837 aa10.52□□□□□ -0.73
ATG4D-202ENST00000585437 TESPA1A2RU30 521 aaPredicted RBP10.52□□□□□ -0.73
ATG4D-202ENST00000585437 DDTLA6NHG4 134 aaPredicted RBP10.52□□□□□ -0.73
ATG4D-202ENST00000585437 MANSC4A6NHS7 340 aaPredicted RBP10.52□□□□□ -0.73
ATG4D-202ENST00000585437 IFIT2P09913 472 aaKnown RBP10.52□□□□□ -0.73
ATG4D-202ENST00000585437 ATP5JP18859 108 aa10.52□□□□□ -0.73
ATG4D-202ENST00000585437 MAP3K9P80192 1104 aa10.52□□□□□ -0.73
ATG4D-202ENST00000585437 SREBF2Q12772 1141 aa10.52□□□□□ -0.73
ATG4D-202ENST00000585437 AAMPQ13685 434 aa10.52□□□□□ -0.73
ATG4D-202ENST00000585437 NOM1Q5C9Z4 860 aaKnown RBP10.52□□□□□ -0.73
ATG4D-202ENST00000585437 NOL9Q5SY16 702 aaKnown RBP10.52□□□□□ -0.73
ATG4D-202ENST00000585437 OPTNQ96CV9 577 aa10.52□□□□□ -0.73
ATG4D-202ENST00000585437 SLC10A4Q96EP9 437 aa10.52□□□□□ -0.73
ATG4D-202ENST00000585437 WRNIP1Q96S55 665 aa10.52□□□□□ -0.73
ATG4D-202ENST00000585437 OSBPL5Q9H0X9 879 aaPredicted RBP10.52□□□□□ -0.73
ATG4D-202ENST00000585437 ELP3Q9H9T3 547 aa10.52□□□□□ -0.73
ATG4D-202ENST00000585437 TSKSQ9UJT2 592 aa10.52□□□□□ -0.73
ATG4D-202ENST00000585437 MGAMO43451 1857 aa10.52□□□□□ -0.73
ATG4D-202ENST00000585437 PHF20L1A8MW92 1017 aa10.51□□□□□ -0.73
ATG4D-202ENST00000585437 PLCG2P16885 1265 aa10.51□□□□□ -0.73
ATG4D-202ENST00000585437 INHBEP58166 350 aa10.51□□□□□ -0.73
ATG4D-202ENST00000585437 TTF1Q15361 905 aaPredicted RBP10.51□□□□□ -0.73
ATG4D-202ENST00000585437 SH3RF3Q8TEJ3 882 aaPredicted RBP10.51□□□□□ -0.73
ATG4D-202ENST00000585437 CNKSR2Q8WXI2 1034 aa10.51□□□□□ -0.73
ATG4D-202ENST00000585437 MS4A4AQ96JQ5 239 aa10.51□□□□□ -0.73
ATG4D-202ENST00000585437 AATFQ9NY61 560 aaKnown RBP eCLIP10.51□□□□□ -0.73
ATG4D-202ENST00000585437 CSADQ9Y600 493 aa10.51□□□□□ -0.73
ATG4D-202ENST00000585437 FLT1P17948 1338 aa10.51□□□□□ -0.73
ATG4D-202ENST00000585437 HTTP42858 3142 aa10.51□□□□□ -0.73
ATG4D-202ENST00000585437 GREB1LQ9C091 1923 aaPredicted RBP10.5□□□□□ -0.73
ATG4D-202ENST00000585437 RBBP6Q7Z6E9 1792 aaKnown RBP10.5□□□□□ -0.73
ATG4D-202ENST00000585437 TCRBV5S4A2TA0A5A2 114 aa10.5□□□□□ -0.73
ATG4D-202ENST00000585437 IGF2BP3O00425 579 aaKnown RBP eCLIP10.5□□□□□ -0.73
ATG4D-202ENST00000585437 SMARCA5O60264 1052 aaPredicted RBP10.5□□□□□ -0.73
ATG4D-202ENST00000585437 TBC1D12O60347 775 aa10.5□□□□□ -0.73
ATG4D-202ENST00000585437 TRPA1O75762 1119 aa10.5□□□□□ -0.73
ATG4D-202ENST00000585437 IDH1O75874 414 aaKnown RBP10.5□□□□□ -0.73
ATG4D-202ENST00000585437 BAG3O95817 575 aa10.5□□□□□ -0.73
ATG4D-202ENST00000585437 INPP5BP32019 993 aa10.5□□□□□ -0.73
ATG4D-202ENST00000585437 MKRN3Q13064 507 aaKnown RBP10.5□□□□□ -0.73
ATG4D-202ENST00000585437 PICALMQ13492 652 aa10.5□□□□□ -0.73
ATG4D-202ENST00000585437 HDAC1Q13547 482 aaPredicted RBP10.5□□□□□ -0.73
ATG4D-202ENST00000585437 B4GALNT3Q6L9W6 998 aa10.5□□□□□ -0.73
ATG4D-202ENST00000585437 MIGA2Q7L4E1 593 aa10.5□□□□□ -0.73
ATG4D-202ENST00000585437 ERO1BQ86YB8 467 aa10.5□□□□□ -0.73
ATG4D-202ENST00000585437 IFNL1Q8IU54 200 aa10.5□□□□□ -0.73
ATG4D-202ENST00000585437 CERS3Q8IU89 383 aa10.5□□□□□ -0.73
ATG4D-202ENST00000585437 TEX11Q8IYF3 940 aa10.5□□□□□ -0.73
ATG4D-202ENST00000585437 ZKSCAN4Q969J2 545 aaPredicted RBP10.5□□□□□ -0.73
ATG4D-202ENST00000585437 HAUS7Q99871 368 aa10.5□□□□□ -0.73
ATG4D-202ENST00000585437 RIOK1Q9BRS2 568 aaKnown RBP10.5□□□□□ -0.73
ATG4D-202ENST00000585437 SALL3Q9BXA9 1300 aa10.5□□□□□ -0.73
ATG4D-202ENST00000585437 PDE6AP16499 860 aa10.49□□□□□ -0.73
ATG4D-202ENST00000585437 CYP7A1P22680 504 aa10.49□□□□□ -0.73
ATG4D-202ENST00000585437 PPATQ06203 517 aa10.49□□□□□ -0.73
ATG4D-202ENST00000585437 MAP3K12Q12852 859 aa10.49□□□□□ -0.73
ATG4D-202ENST00000585437 PPIL2Q13356 520 aa10.49□□□□□ -0.73
ATG4D-202ENST00000585437 METTL16Q86W50 562 aaKnown RBP10.49□□□□□ -0.73
ATG4D-202ENST00000585437 MAGEB6Q8N7X4 407 aa10.49□□□□□ -0.73
ATG4D-202ENST00000585437 EDC3Q96F86 508 aaKnown RBP10.49□□□□□ -0.73
ATG4D-202ENST00000585437 OTUD5Q96G74 571 aa10.49□□□□□ -0.73
ATG4D-202ENST00000585437 DNAJC2Q99543 621 aaKnown RBP10.49□□□□□ -0.73
ATG4D-202ENST00000585437 NOL10Q9BSC4 688 aaKnown RBP10.49□□□□□ -0.73
ATG4D-202ENST00000585437 TSHZ2Q9NRE2 1034 aa10.49□□□□□ -0.73
ATG4D-202ENST00000585437 ECHDC1Q9NTX5 307 aa10.49□□□□□ -0.73
ATG4D-202ENST00000585437 PAG1Q9NWQ8 432 aa10.49□□□□□ -0.73
ATG4D-202ENST00000585437 KCNH4Q9UQ05 1017 aa10.49□□□□□ -0.73
ATG4D-202ENST00000585437 PARP14Q460N5 1801 aa10.49□□□□□ -0.73
ATG4D-202ENST00000585437 GOLIM4O00461 696 aa10.48□□□□□ -0.73
ATG4D-202ENST00000585437 IRF6O14896 467 aa10.48□□□□□ -0.73
ATG4D-202ENST00000585437 ALDH1A1P00352 501 aa10.48□□□□□ -0.73
ATG4D-202ENST00000585437 SLURP2P0DP57 97 aa10.48□□□□□ -0.73
ATG4D-202ENST00000585437 GTF2A2P52657 109 aa10.48□□□□□ -0.73
ATG4D-202ENST00000585437 DYNLL1P63167 89 aaKnown RBP10.48□□□□□ -0.73
ATG4D-202ENST00000585437 SCYL3Q8IZE3 742 aa10.48□□□□□ -0.73
ATG4D-202ENST00000585437 TNS4Q8IZW8 715 aa10.48□□□□□ -0.73
ATG4D-202ENST00000585437 BRI3BPQ8WY22 251 aa10.48□□□□□ -0.73
ATG4D-202ENST00000585437 PTPN18Q99952 460 aa10.48□□□□□ -0.73
ATG4D-202ENST00000585437 DHX36Q9H2U1 1008 aaKnown RBP10.48□□□□□ -0.73
ATG4D-202ENST00000585437 DNAJC18Q9H819 358 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms