RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 TEX11Q8IYF3 940 aa30.26■■■□□ 2.43
TTC39C-209ENST00000584250 MIGA1Q8NAN2 632 aa30.26■■■□□ 2.43
TTC39C-209ENST00000584250 WNK4Q96J92 1243 aa30.26■■■□□ 2.43
TTC39C-209ENST00000584250 LBX1P52954 281 aa30.25■■■□□ 2.43
TTC39C-209ENST00000584250 PPP4CP60510 307 aa30.25■■■□□ 2.43
TTC39C-209ENST00000584250 MAP3K9P80192 1104 aa30.25■■■□□ 2.43
TTC39C-209ENST00000584250 HDAC1Q13547 482 aaPredicted RBP30.25■■■□□ 2.43
TTC39C-209ENST00000584250 ZKSCAN4Q969J2 545 aaPredicted RBP30.25■■■□□ 2.43
TTC39C-209ENST00000584250 WRNIP1Q96S55 665 aa30.25■■■□□ 2.43
TTC39C-209ENST00000584250 HAUS7Q99871 368 aa30.25■■■□□ 2.43
TTC39C-209ENST00000584250 CHGBP05060 677 aa30.24■■■□□ 2.43
TTC39C-209ENST00000584250 INPP5BP32019 993 aa30.24■■■□□ 2.43
TTC39C-209ENST00000584250 MAP3K12Q12852 859 aa30.24■■■□□ 2.43
TTC39C-209ENST00000584250 COL13A1Q5TAT6 717 aaPredicted RBP30.24■■■□□ 2.43
TTC39C-209ENST00000584250 ZSCAN29Q8IWY8 852 aaPredicted RBP30.24■■■□□ 2.43
TTC39C-209ENST00000584250 PAG1Q9NWQ8 432 aa30.24■■■□□ 2.43
TTC39C-209ENST00000584250 CTCFP49711 727 aaPredicted RBP30.23■■■□□ 2.43
TTC39C-209ENST00000584250 BEGAINQ9BUH8 593 aa30.23■■■□□ 2.43
TTC39C-209ENST00000584250 ECHDC1Q9NTX5 307 aa30.23■■■□□ 2.43
TTC39C-209ENST00000584250 SNCAIPQ9Y6H5 919 aa30.23■■■□□ 2.43
TTC39C-209ENST00000584250 BAG3O95817 575 aa30.22■■■□□ 2.43
TTC39C-209ENST00000584250 IGHDP01880 384 aa30.22■■■□□ 2.43
TTC39C-209ENST00000584250 PDE6AP16499 860 aa30.22■■■□□ 2.43
TTC39C-209ENST00000584250 TTF1Q15361 905 aaPredicted RBP30.22■■■□□ 2.43
TTC39C-209ENST00000584250 DCAF15Q66K64 600 aa30.22■■■□□ 2.43
TTC39C-209ENST00000584250 NOL10Q9BSC4 688 aaKnown RBP30.22■■■□□ 2.43
TTC39C-209ENST00000584250 ZNF341Q9BYN7 854 aa30.22■■■□□ 2.43
TTC39C-209ENST00000584250 UNCXA6NJT0 531 aa30.21■■■□□ 2.43
TTC39C-209ENST00000584250 SLC9C2Q5TAH2 1124 aa30.21■■■□□ 2.43
TTC39C-209ENST00000584250 TGFBRAP1Q8WUH2 860 aa30.21■■■□□ 2.43
TTC39C-209ENST00000584250 OPTNQ96CV9 577 aa30.21■■■□□ 2.43
TTC39C-209ENST00000584250 OSBPL5Q9H0X9 879 aaPredicted RBP30.21■■■□□ 2.43
TTC39C-209ENST00000584250 RNF186Q9NXI6 227 aa30.21■■■□□ 2.43
TTC39C-209ENST00000584250 FAM196BA6NMK8 535 aa30.2■■■□□ 2.43
TTC39C-209ENST00000584250 IGSF3O75054 1194 aa30.2■■■□□ 2.43
TTC39C-209ENST00000584250 NPM3O75607 178 aaKnown RBP30.2■■■□□ 2.43
TTC39C-209ENST00000584250 MAP4K4O95819 1239 aaPredicted RBP30.2■■■□□ 2.43
TTC39C-209ENST00000584250 ANKRD45Q5TZF3 282 aa30.2■■■□□ 2.43
TTC39C-209ENST00000584250 MAPKAPK5Q8IW41 473 aa30.2■■■□□ 2.43
TTC39C-209ENST00000584250 HOOK2Q96ED9 719 aa30.2■■■□□ 2.43
TTC39C-209ENST00000584250 ZNF112Q9UJU3 913 aa30.2■■■□□ 2.43
TTC39C-209ENST00000584250 FOCADQ5VW36 1801 aa30.19■■■□□ 2.42
TTC39C-209ENST00000584250 TCRBV5S4A2TA0A5A2 114 aa30.19■■■□□ 2.42
TTC39C-209ENST00000584250 TRPA1O75762 1119 aa30.19■■■□□ 2.42
TTC39C-209ENST00000584250 AAMPQ13685 434 aa30.19■■■□□ 2.42
TTC39C-209ENST00000584250 CSADQ9Y600 493 aa30.19■■■□□ 2.42
TTC39C-209ENST00000584250 ZNF532Q9HCE3 1301 aa30.19■■■□□ 2.42
TTC39C-209ENST00000584250 RIOK1Q9BRS2 568 aaKnown RBP30.18■■■□□ 2.42
TTC39C-209ENST00000584250 SIPA1L1O43166 1804 aa30.17■■■□□ 2.42
TTC39C-209ENST00000584250 PHF20L1A8MW92 1017 aa30.17■■■□□ 2.42
TTC39C-209ENST00000584250 ZBTB48P10074 688 aaPredicted RBP30.17■■■□□ 2.42
TTC39C-209ENST00000584250 PLCG2P16885 1265 aa30.17■■■□□ 2.42
TTC39C-209ENST00000584250 TM4SF4P48230 202 aa30.17■■■□□ 2.42
TTC39C-209ENST00000584250 FLT1P17948 1338 aa30.17■■■□□ 2.42
TTC39C-209ENST00000584250 MAP3K10Q02779 954 aa30.16■■■□□ 2.42
TTC39C-209ENST00000584250 GCC1Q96CN9 775 aa30.16■■■□□ 2.42
TTC39C-209ENST00000584250 OTUD5Q96G74 571 aa30.16■■■□□ 2.42
TTC39C-209ENST00000584250 SALL3Q9BXA9 1300 aa30.16■■■□□ 2.42
TTC39C-209ENST00000584250 LAMB1P07942 1786 aa30.15■■■□□ 2.42
TTC39C-209ENST00000584250 SLC4A8Q2Y0W8 1093 aa30.15■■■□□ 2.42
TTC39C-209ENST00000584250 PI4K2BQ8TCG2 481 aa30.15■■■□□ 2.42
TTC39C-209ENST00000584250 SAP30BPQ9UHR5 308 aaKnown RBP30.15■■■□□ 2.42
TTC39C-209ENST00000584250 COL2A1P02458 1487 aaPredicted RBP30.14■■■□□ 2.42
TTC39C-209ENST00000584250 SPDYE5A6NIY4 337 aa30.14■■■□□ 2.42
TTC39C-209ENST00000584250 ADD2P35612 726 aa30.14■■■□□ 2.42
TTC39C-209ENST00000584250 PALD1Q9ULE6 856 aa30.14■■■□□ 2.42
TTC39C-209ENST00000584250 MYH7P12883 1935 aa30.14■■■□□ 2.41
TTC39C-209ENST00000584250 CA12O43570 354 aa30.13■■■□□ 2.41
TTC39C-209ENST00000584250 SMC5Q8IY18 1101 aa30.13■■■□□ 2.41
TTC39C-209ENST00000584250 MS4A4AQ96JQ5 239 aa30.13■■■□□ 2.41
TTC39C-209ENST00000584250 RWDD1Q9H446 243 aaPredicted RBP30.13■■■□□ 2.41
TTC39C-209ENST00000584250 PRDM10Q9NQV6 1147 aa30.13■■■□□ 2.41
TTC39C-209ENST00000584250 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.13■■■□□ 2.41
TTC39C-209ENST00000584250 CASP8AP2Q9UKL3 1982 aa30.12■■■□□ 2.41
TTC39C-209ENST00000584250 MAGEB6P1A0A0J9YX57 407 aa30.12■■■□□ 2.41
TTC39C-209ENST00000584250 MANSC4A6NHS7 340 aaPredicted RBP30.12■■■□□ 2.41
TTC39C-209ENST00000584250 IGF2BP3O00425 579 aaKnown RBP eCLIP30.12■■■□□ 2.41
TTC39C-209ENST00000584250 RRP1BQ14684 758 aaKnown RBP30.12■■■□□ 2.41
TTC39C-209ENST00000584250 B4GALNT3Q6L9W6 998 aa30.12■■■□□ 2.41
TTC39C-209ENST00000584250 REM2Q8IYK8 340 aaPredicted RBP30.12■■■□□ 2.41
TTC39C-209ENST00000584250 LCORLQ8N3X6 602 aa30.12■■■□□ 2.41
TTC39C-209ENST00000584250 GPATCH3Q96I76 525 aa30.12■■■□□ 2.41
TTC39C-209ENST00000584250 PTPN18Q99952 460 aa30.12■■■□□ 2.41
TTC39C-209ENST00000584250 SREBF2Q12772 1141 aa30.11■■■□□ 2.41
TTC39C-209ENST00000584250 ERO1BQ86YB8 467 aa30.11■■■□□ 2.41
TTC39C-209ENST00000584250 R3HDMLQ9H3Y0 253 aa30.11■■■□□ 2.41
TTC39C-209ENST00000584250 IRF6O14896 467 aa30.1■■■□□ 2.41
TTC39C-209ENST00000584250 TBC1D8O95759 1140 aa30.1■■■□□ 2.41
TTC39C-209ENST00000584250 MX1P20591 662 aa30.1■■■□□ 2.41
TTC39C-209ENST00000584250 NOL9Q5SY16 702 aaKnown RBP30.1■■■□□ 2.41
TTC39C-209ENST00000584250 LNPKQ9C0E8 428 aa30.1■■■□□ 2.41
TTC39C-209ENST00000584250 ARMT1Q9H993 441 aa30.1■■■□□ 2.41
TTC39C-209ENST00000584250 SAGE1Q9NXZ1 904 aa30.1■■■□□ 2.41
TTC39C-209ENST00000584250 TTC41PQ6P2S7 1318 aa30.1■■■□□ 2.41
TTC39C-209ENST00000584250 MYH1P12882 1939 aa30.1■■■□□ 2.41
TTC39C-209ENST00000584250 USP5P45974 858 aa30.09■■■□□ 2.41
TTC39C-209ENST00000584250 TMED8Q6PL24 325 aaPredicted RBP30.09■■■□□ 2.41
TTC39C-209ENST00000584250 CCDC84Q86UT8 332 aaPredicted RBP30.09■■■□□ 2.41
TTC39C-209ENST00000584250 IFNL1Q8IU54 200 aa30.09■■■□□ 2.41
TTC39C-209ENST00000584250 BRI3BPQ8WY22 251 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms