RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	DNM1L	O00429	736 aa		6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	IL9	P15248	144 aa		6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	MOGS	Q13724	837 aa		6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	KIAA0319	Q5VV43	1072 aa		6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	ZNF790	Q6PG37	636 aa		6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	SH3RF1	Q7Z6J0	888 aa		6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	COA7	Q96BR5	231 aa		6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	CHAMP1	Q96JM3	812 aa		6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	HNRNPAB	Q99729	332 aa	Known RBP	6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	ZC3H12C	Q9C0D7	883 aa	Known RBP	6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	PODXL2	Q9NZ53	605 aa		6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	NSFL1C	Q9UNZ2	370 aa	Known RBP	6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	ATP11B	Q9Y2G3	1177 aa		6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	DOPEY1	Q5JWR5	2465 aa		6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	MYBBP1A	Q9BQG0	1328 aa	Known RBP	6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	PTPRF	P10586	1907 aa		6.93	□□□□□ -1.3
MSI2-216	ENST00000582772	C6orf229	H3BNL8	230 aa		6.92	□□□□□ -1.3
MSI2-216	ENST00000582772	KIAA0355	O15063	1070 aa		6.92	□□□□□ -1.3
MSI2-216	ENST00000582772	GALR2	O43603	387 aa	Predicted RBP	6.92	□□□□□ -1.3
MSI2-216	ENST00000582772	PRKAR2A	P13861	404 aa	Known RBP	6.92	□□□□□ -1.3
MSI2-216	ENST00000582772	TNNT2	P45379	298 aa	Predicted RBP	6.92	□□□□□ -1.3
MSI2-216	ENST00000582772	ATN1	P54259	1190 aa	Predicted RBP	6.92	□□□□□ -1.3
MSI2-216	ENST00000582772	MAP3K9	P80192	1104 aa		6.92	□□□□□ -1.3
MSI2-216	ENST00000582772	DACT2	Q5SW24	774 aa		6.92	□□□□□ -1.3
MSI2-216	ENST00000582772	SUSD4	Q5VX71	490 aa		6.92	□□□□□ -1.3
MSI2-216	ENST00000582772	TRIM67	Q6ZTA4	783 aa		6.92	□□□□□ -1.3
MSI2-216	ENST00000582772	TRIB2	Q92519	343 aa		6.92	□□□□□ -1.3
MSI2-216	ENST00000582772	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	6.92	□□□□□ -1.3	6e-6	■□□□□ 9.2
MSI2-216	ENST00000582772	NKX2-4	Q9H2Z4	354 aa		6.92	□□□□□ -1.3
MSI2-216	ENST00000582772	YBX2	Q9Y2T7	364 aa	Known RBP	6.92	□□□□□ -1.3
MSI2-216	ENST00000582772	CSAD	Q9Y600	493 aa		6.92	□□□□□ -1.3
MSI2-216	ENST00000582772	SNCAIP	Q9Y6H5	919 aa		6.92	□□□□□ -1.3
MSI2-216	ENST00000582772	ZNF521	Q96K83	1311 aa		6.92	□□□□□ -1.3
MSI2-216	ENST00000582772	KCNA4	P22459	653 aa		6.91	□□□□□ -1.3
MSI2-216	ENST00000582772	VCP	P55072	806 aa	Known RBP	6.91	□□□□□ -1.3
MSI2-216	ENST00000582772	GPSM2	P81274	684 aa		6.91	□□□□□ -1.3
MSI2-216	ENST00000582772	NBPF20	Q3BBV1	942 aa		6.91	□□□□□ -1.3
MSI2-216	ENST00000582772	AMER1	Q5JTC6	1135 aa	Predicted RBP	6.91	□□□□□ -1.3
MSI2-216	ENST00000582772	EPHA10	Q5JZY3	1008 aa		6.91	□□□□□ -1.3
MSI2-216	ENST00000582772	SLC39A5	Q6ZMH5	540 aa		6.91	□□□□□ -1.3
MSI2-216	ENST00000582772	PRR23B	Q6ZRT6	265 aa		6.91	□□□□□ -1.3
MSI2-216	ENST00000582772	DDX46	Q7L014	1031 aa	Known RBP	6.91	□□□□□ -1.3
MSI2-216	ENST00000582772	FMNL2	Q96PY5	1086 aa		6.91	□□□□□ -1.3
MSI2-216	ENST00000582772	UBE2Z	Q9H832	354 aa	Predicted RBP	6.91	□□□□□ -1.3
MSI2-216	ENST00000582772	GJD2	Q9UKL4	321 aa		6.91	□□□□□ -1.3
MSI2-216	ENST00000582772	TACC3	Q9Y6A5	838 aa		6.91	□□□□□ -1.3
MSI2-216	ENST00000582772	CNOT1	A5YKK6	2376 aa	Known RBP	6.91	□□□□□ -1.3
MSI2-216	ENST00000582772	RALGAPA2	Q2PPJ7	1873 aa		6.9	□□□□□ -1.3
MSI2-216	ENST00000582772	IGSF10	Q6WRI0	2623 aa		6.9	□□□□□ -1.3
MSI2-216	ENST00000582772	SLC5A1	P13866	664 aa		6.9	□□□□□ -1.3
MSI2-216	ENST00000582772	SDHB	P21912	280 aa		6.9	□□□□□ -1.3
MSI2-216	ENST00000582772	AVPR2	P30518	371 aa		6.9	□□□□□ -1.3
MSI2-216	ENST00000582772	TRIM60	Q495X7	471 aa		6.9	□□□□□ -1.3
MSI2-216	ENST00000582772	PPP2R2D	Q66LE6	453 aa		6.9	□□□□□ -1.3
MSI2-216	ENST00000582772	PTCRA	Q6ISU1	281 aa	Predicted RBP	6.9	□□□□□ -1.3
MSI2-216	ENST00000582772	FRMD5	Q7Z6J6	570 aa		6.9	□□□□□ -1.3
MSI2-216	ENST00000582772	ADHFE1	Q8IWW8	467 aa		6.9	□□□□□ -1.3
MSI2-216	ENST00000582772	ZNF34	Q8IZ26	560 aa		6.9	□□□□□ -1.3
MSI2-216	ENST00000582772	DAGLA	Q9Y4D2	1042 aa		6.9	□□□□□ -1.3
MSI2-216	ENST00000582772	HECTD1	Q9ULT8	2610 aa		6.89	□□□□□ -1.31
MSI2-216	ENST00000582772	TEX15	Q9BXT5	2789 aa		6.89	□□□□□ -1.31
MSI2-216	ENST00000582772	TAF4	O00268	1085 aa		6.89	□□□□□ -1.31
MSI2-216	ENST00000582772	XRCC5	P13010	732 aa	Known RBP	6.89	□□□□□ -1.31
MSI2-216	ENST00000582772	PPAT	Q06203	517 aa		6.89	□□□□□ -1.31
MSI2-216	ENST00000582772	TMEM240	Q5SV17	173 aa		6.89	□□□□□ -1.31
MSI2-216	ENST00000582772	CCDC174	Q6PII3	467 aa		6.89	□□□□□ -1.31
MSI2-216	ENST00000582772	LRSAM1	Q6UWE0	723 aa		6.89	□□□□□ -1.31
MSI2-216	ENST00000582772	TMEFF1	Q8IYR6	380 aa		6.89	□□□□□ -1.31
MSI2-216	ENST00000582772	MUTYH	Q9UIF7	546 aa		6.89	□□□□□ -1.31
MSI2-216	ENST00000582772	SLC45A1	Q9Y2W3	748 aa		6.89	□□□□□ -1.31
MSI2-216	ENST00000582772		A0A1B0GUL6	1792 aa		6.88	□□□□□ -1.31
MSI2-216	ENST00000582772	CLTB	P09497	229 aa		6.88	□□□□□ -1.31
MSI2-216	ENST00000582772	CYP2C8	P10632	490 aa		6.88	□□□□□ -1.31
MSI2-216	ENST00000582772	PIP4K2A	P48426	406 aa	Predicted RBP	6.88	□□□□□ -1.31
MSI2-216	ENST00000582772	PARP10	Q53GL7	1025 aa		6.88	□□□□□ -1.31
MSI2-216	ENST00000582772	STRIP1	Q5VSL9	837 aa		6.88	□□□□□ -1.31
MSI2-216	ENST00000582772	C16orf59	Q7L2K0	433 aa		6.88	□□□□□ -1.31
MSI2-216	ENST00000582772	PPP1R42	Q7Z4L9	355 aa		6.88	□□□□□ -1.31
MSI2-216	ENST00000582772	TRMT44	Q8IYL2	757 aa	Known RBP	6.88	□□□□□ -1.31
MSI2-216	ENST00000582772	LPAR1	Q92633	364 aa		6.88	□□□□□ -1.31
MSI2-216	ENST00000582772	TEPSIN	Q96N21	525 aa		6.88	□□□□□ -1.31
MSI2-216	ENST00000582772	RNF39	Q9H2S5	420 aa		6.88	□□□□□ -1.31
MSI2-216	ENST00000582772	LMCD1	Q9NZU5	365 aa		6.88	□□□□□ -1.31
MSI2-216	ENST00000582772	USP16	Q9Y5T5	823 aa		6.88	□□□□□ -1.31
MSI2-216	ENST00000582772	MYO9A	B2RTY4	2548 aa		6.88	□□□□□ -1.31
MSI2-216	ENST00000582772	ZNF536	O15090	1300 aa		6.87	□□□□□ -1.31
MSI2-216	ENST00000582772	MAP3K15	Q6ZN16	1313 aa		6.87	□□□□□ -1.31
MSI2-216	ENST00000582772		G3V3G9	751 aa		6.87	□□□□□ -1.31
MSI2-216	ENST00000582772	PPM1G	O15355	546 aa	Predicted RBP	6.87	□□□□□ -1.31
MSI2-216	ENST00000582772	MSC	O60682	206 aa		6.87	□□□□□ -1.31
MSI2-216	ENST00000582772	RAG1	P15918	1043 aa		6.87	□□□□□ -1.31
MSI2-216	ENST00000582772	CACNB2	Q08289	660 aa	Predicted RBP	6.87	□□□□□ -1.31
MSI2-216	ENST00000582772	RASA3	Q14644	834 aa		6.87	□□□□□ -1.31
MSI2-216	ENST00000582772	FAM110C	Q1W6H9	321 aa		6.87	□□□□□ -1.31
MSI2-216	ENST00000582772	DCAF8	Q5TAQ9	597 aa		6.87	□□□□□ -1.31
MSI2-216	ENST00000582772	KRT40	Q6A162	431 aa		6.87	□□□□□ -1.31
MSI2-216	ENST00000582772	GPAT2	Q6NUI2	795 aa		6.87	□□□□□ -1.31
MSI2-216	ENST00000582772	PSRC1	Q6PGN9	363 aa	Predicted RBP	6.87	□□□□□ -1.31
MSI2-216	ENST00000582772	KIAA2013	Q8IYS2	634 aa		6.87	□□□□□ -1.31

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms