RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 SNCAIPQ9Y6H5 919 aa30.42■■■□□ 2.46
CDC42EP4-205ENST00000580315 KIAA0100Q14667 2235 aaKnown RBP30.41■■■□□ 2.46
CDC42EP4-205ENST00000580315 RAB11FIP3O75154 756 aa30.41■■■□□ 2.46
CDC42EP4-205ENST00000580315 AACSQ86V21 672 aa30.41■■■□□ 2.46
CDC42EP4-205ENST00000580315 GSTO1P78417 241 aa30.4■■■□□ 2.46
CDC42EP4-205ENST00000580315 ARHGEF6Q15052 776 aa30.4■■■□□ 2.46
CDC42EP4-205ENST00000580315 CDC42EP5Q6NZY7 148 aa30.4■■■□□ 2.46
CDC42EP4-205ENST00000580315 ERO1BQ86YB8 467 aa30.4■■■□□ 2.46
CDC42EP4-205ENST00000580315 ZKSCAN4Q969J2 545 aaPredicted RBP30.4■■■□□ 2.46
CDC42EP4-205ENST00000580315 WRNIP1Q96S55 665 aa30.4■■■□□ 2.46
CDC42EP4-205ENST00000580315 TLR7Q9NYK1 1049 aaKnown RBP30.4■■■□□ 2.46
CDC42EP4-205ENST00000580315 RAI14Q9P0K7 980 aa30.4■■■□□ 2.46
CDC42EP4-205ENST00000580315 APBB1O00213 710 aa30.39■■■□□ 2.46
CDC42EP4-205ENST00000580315 MECOMQ03112 1051 aa30.39■■■□□ 2.46
CDC42EP4-205ENST00000580315 TBC1D9Q6ZT07 1266 aa30.39■■■□□ 2.46
CDC42EP4-205ENST00000580315 CLASRPQ8N2M8 674 aaKnown RBP30.39■■■□□ 2.46
CDC42EP4-205ENST00000580315 HOOK2Q96ED9 719 aa30.39■■■□□ 2.46
CDC42EP4-205ENST00000580315 FAM163AQ96GL9 167 aaPredicted RBP30.39■■■□□ 2.46
CDC42EP4-205ENST00000580315 IL1RAPL2Q9NP60 686 aa30.39■■■□□ 2.46
CDC42EP4-205ENST00000580315 SNRKQ9NRH2 765 aa30.39■■■□□ 2.46
CDC42EP4-205ENST00000580315 USP40Q9NVE5 1235 aa30.39■■■□□ 2.46
CDC42EP4-205ENST00000580315 LRP2BPQ9P2M1 347 aa30.39■■■□□ 2.46
CDC42EP4-205ENST00000580315 GAKO14976 1311 aa30.39■■■□□ 2.46
CDC42EP4-205ENST00000580315 LDHCP07864 332 aa30.38■■■□□ 2.45
CDC42EP4-205ENST00000580315 CETPP11597 493 aa30.38■■■□□ 2.45
CDC42EP4-205ENST00000580315 EN2P19622 333 aaPredicted RBP30.38■■■□□ 2.45
CDC42EP4-205ENST00000580315 IRF6O14896 467 aa30.37■■■□□ 2.45
CDC42EP4-205ENST00000580315 ZNF333Q96JL9 665 aa30.37■■■□□ 2.45
CDC42EP4-205ENST00000580315 MROH7-TTC4A0A0A0MT08 1334 aa30.37■■■□□ 2.45
CDC42EP4-205ENST00000580315 GCC1Q96CN9 775 aa30.36■■■□□ 2.45
CDC42EP4-205ENST00000580315 PTCH2Q9Y6C5 1203 aa30.36■■■□□ 2.45
CDC42EP4-205ENST00000580315 BTBD19C9JJ37 291 aa30.35■■■□□ 2.45
CDC42EP4-205ENST00000580315 TLR2O60603 784 aa30.35■■■□□ 2.45
CDC42EP4-205ENST00000580315 WDHD1O75717 1129 aaPredicted RBP30.35■■■□□ 2.45
CDC42EP4-205ENST00000580315 SNAPC2Q13487 334 aa30.35■■■□□ 2.45
CDC42EP4-205ENST00000580315 DCAF15Q66K64 600 aa30.35■■■□□ 2.45
CDC42EP4-205ENST00000580315 FAM151AQ8WW52 585 aa30.35■■■□□ 2.45
CDC42EP4-205ENST00000580315 NSUN4Q96CB9 384 aaKnown RBP30.35■■■□□ 2.45
CDC42EP4-205ENST00000580315 ZCCHC17Q9NP64 241 aaKnown RBP30.35■■■□□ 2.45
CDC42EP4-205ENST00000580315 RBBP6Q7Z6E9 1792 aaKnown RBP30.34■■■□□ 2.45
CDC42EP4-205ENST00000580315 RPAP1Q9BWH6 1393 aaPredicted RBP30.34■■■□□ 2.45
CDC42EP4-205ENST00000580315 IFIT2P09913 472 aaKnown RBP30.34■■■□□ 2.45
CDC42EP4-205ENST00000580315 BTDP43251 543 aa30.34■■■□□ 2.45
CDC42EP4-205ENST00000580315 PPIL2Q13356 520 aa30.34■■■□□ 2.45
CDC42EP4-205ENST00000580315 SLC9C1Q4G0N8 1177 aa30.34■■■□□ 2.45
CDC42EP4-205ENST00000580315 TMEM106CQ9BVX2 250 aa30.34■■■□□ 2.45
CDC42EP4-205ENST00000580315 IGSF3O75054 1194 aa30.33■■■□□ 2.45
CDC42EP4-205ENST00000580315 ZAP70P43403 619 aa30.33■■■□□ 2.45
CDC42EP4-205ENST00000580315 MIGA2Q7L4E1 593 aa30.33■■■□□ 2.45
CDC42EP4-205ENST00000580315 NBPF11Q86T75 865 aa30.33■■■□□ 2.45
CDC42EP4-205ENST00000580315 CYP2E1P05181 493 aaPredicted RBP30.32■■■□□ 2.44
CDC42EP4-205ENST00000580315 TCP10Q12799 353 aa30.32■■■□□ 2.44
CDC42EP4-205ENST00000580315 ZNF341Q9BYN7 854 aa30.32■■■□□ 2.44
CDC42EP4-205ENST00000580315 GPR75-ASB3A0A0A6YYF3 556 aa30.31■■■□□ 2.44
CDC42EP4-205ENST00000580315 NFIAQ12857 509 aa30.31■■■□□ 2.44
CDC42EP4-205ENST00000580315 NOL10Q9BSC4 688 aaKnown RBP30.31■■■□□ 2.44
CDC42EP4-205ENST00000580315 IDI2Q9BXS1 227 aa30.31■■■□□ 2.44
CDC42EP4-205ENST00000580315 ARHGAP39Q9C0H5 1083 aa30.31■■■□□ 2.44
CDC42EP4-205ENST00000580315 BCL11AQ9H165 835 aa30.31■■■□□ 2.44
CDC42EP4-205ENST00000580315 MAP4K4O95819 1239 aaPredicted RBP30.3■■■□□ 2.44
CDC42EP4-205ENST00000580315 INPP5BP32019 993 aa30.3■■■□□ 2.44
CDC42EP4-205ENST00000580315 LACTBP83111 547 aaPredicted RBP30.3■■■□□ 2.44
CDC42EP4-205ENST00000580315 PPATQ06203 517 aa30.3■■■□□ 2.44
CDC42EP4-205ENST00000580315 ZNF384Q8TF68 577 aa30.3■■■□□ 2.44
CDC42EP4-205ENST00000580315 KIF22Q14807 665 aa30.29■■■□□ 2.44
CDC42EP4-205ENST00000580315 NAA16Q6N069 864 aaPredicted RBP30.29■■■□□ 2.44
CDC42EP4-205ENST00000580315 LRRCC1Q9C099 1032 aa30.29■■■□□ 2.44
CDC42EP4-205ENST00000580315 FAM198AQ9UFP1 575 aa30.29■■■□□ 2.44
CDC42EP4-205ENST00000580315 ENTPD3O75355 529 aa30.28■■■□□ 2.44
CDC42EP4-205ENST00000580315 ZNF112Q9UJU3 913 aa30.28■■■□□ 2.44
CDC42EP4-205ENST00000580315 RGS3P49796 1198 aa30.27■■■□□ 2.44
CDC42EP4-205ENST00000580315 HABP4Q5JVS0 413 aaKnown RBP30.27■■■□□ 2.44
CDC42EP4-205ENST00000580315 PIH1D3Q9NQM4 214 aaKnown RBP30.27■■■□□ 2.44
CDC42EP4-205ENST00000580315 BAG3O95817 575 aa30.26■■■□□ 2.43
CDC42EP4-205ENST00000580315 SLC4A8Q2Y0W8 1093 aa30.26■■■□□ 2.43
CDC42EP4-205ENST00000580315 MYH2Q9UKX2 1941 aa30.26■■■□□ 2.43
CDC42EP4-205ENST00000580315 GNRH1P01148 92 aa30.25■■■□□ 2.43
CDC42EP4-205ENST00000580315 C17orf99Q6UX52 265 aa30.25■■■□□ 2.43
CDC42EP4-205ENST00000580315 SH3TC2Q8TF17 1288 aa30.25■■■□□ 2.43
CDC42EP4-205ENST00000580315 CRBNQ96SW2 442 aa30.25■■■□□ 2.43
CDC42EP4-205ENST00000580315 DCTPP1Q9H773 170 aa30.25■■■□□ 2.43
CDC42EP4-205ENST00000580315 IDH1O75874 414 aaKnown RBP30.24■■■□□ 2.43
CDC42EP4-205ENST00000580315 MYCP01106 439 aaPredicted RBP30.24■■■□□ 2.43
CDC42EP4-205ENST00000580315 RHBDL3P58872 404 aa30.24■■■□□ 2.43
CDC42EP4-205ENST00000580315 PICALMQ13492 652 aa30.24■■■□□ 2.43
CDC42EP4-205ENST00000580315 ANKRD23Q86SG2 305 aa30.24■■■□□ 2.43
CDC42EP4-205ENST00000580315 ZSCAN29Q8IWY8 852 aaPredicted RBP30.24■■■□□ 2.43
CDC42EP4-205ENST00000580315 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.24■■■□□ 2.43
CDC42EP4-205ENST00000580315 KCNH4Q9UQ05 1017 aa30.24■■■□□ 2.43
CDC42EP4-205ENST00000580315 RFX7Q2KHR2 1363 aa30.24■■■□□ 2.43
CDC42EP4-205ENST00000580315 PLCG2P16885 1265 aa30.23■■■□□ 2.43
CDC42EP4-205ENST00000580315 TTF1Q15361 905 aaPredicted RBP30.23■■■□□ 2.43
CDC42EP4-205ENST00000580315 PDHXO00330 501 aa30.22■■■□□ 2.43
CDC42EP4-205ENST00000580315 NPM3O75607 178 aaKnown RBP30.22■■■□□ 2.43
CDC42EP4-205ENST00000580315 MAP3K12Q12852 859 aa30.22■■■□□ 2.43
CDC42EP4-205ENST00000580315 TMED8Q6PL24 325 aaPredicted RBP30.22■■■□□ 2.43
CDC42EP4-205ENST00000580315 ZFPM1Q8IX07 1006 aa30.22■■■□□ 2.43
CDC42EP4-205ENST00000580315 CPA4Q9UI42 421 aa30.22■■■□□ 2.43
CDC42EP4-205ENST00000580315 PCDHB15Q9Y5E8 787 aa30.22■■■□□ 2.43
CDC42EP4-205ENST00000580315 NDUFB9Q9Y6M9 179 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms