RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	ADD2	P35612	726 aa		17.06	■□□□□ 0.32
PRPF8-216	ENST00000577001	METTL16	Q86W50	562 aa	Known RBP	17.06	■□□□□ 0.32
PRPF8-216	ENST00000577001	TOP1	P11387	765 aa	Known RBP	17.05	■□□□□ 0.32
PRPF8-216	ENST00000577001	BMP6	P22004	513 aa		17.05	■□□□□ 0.32
PRPF8-216	ENST00000577001	NCAPH	Q15003	741 aa		17.05	■□□□□ 0.32
PRPF8-216	ENST00000577001	MTERF4	Q7Z6M4	381 aa	Known RBP	17.05	■□□□□ 0.32
PRPF8-216	ENST00000577001	IFNL3	Q8IZI9	196 aa		17.05	■□□□□ 0.32
PRPF8-216	ENST00000577001	MRFAP1L1	Q96HT8	127 aa		17.05	■□□□□ 0.32
PRPF8-216	ENST00000577001	PCDH11X	Q9BZA7	1347 aa		17.05	■□□□□ 0.32
PRPF8-216	ENST00000577001	PCDH11Y	Q9BZA8	1340 aa		17.05	■□□□□ 0.32
PRPF8-216	ENST00000577001	EARS2	Q5JPH6	523 aa	Known RBP	17.05	■□□□□ 0.32
PRPF8-216	ENST00000577001	FAM47A	Q5JRC9	791 aa		17.05	■□□□□ 0.32
PRPF8-216	ENST00000577001	ANKRD7	Q92527	254 aa		17.05	■□□□□ 0.32
PRPF8-216	ENST00000577001	RIPOR2	Q9Y4F9	1068 aa		17.05	■□□□□ 0.32
PRPF8-216	ENST00000577001	NLRP12	P59046	1061 aa		17.04	■□□□□ 0.32
PRPF8-216	ENST00000577001	CCT6A	P40227	531 aa	Known RBP	17.04	■□□□□ 0.32
PRPF8-216	ENST00000577001	GNG11	P61952	73 aa		17.04	■□□□□ 0.32
PRPF8-216	ENST00000577001	SSRP1	Q08945	709 aa	Known RBP	17.04	■□□□□ 0.32
PRPF8-216	ENST00000577001	DHX8	Q14562	1220 aa	Known RBP	17.04	■□□□□ 0.32
PRPF8-216	ENST00000577001	OLFM4	Q6UX06	510 aa		17.04	■□□□□ 0.32
PRPF8-216	ENST00000577001	C5	P01031	1676 aa		17.04	■□□□□ 0.32
PRPF8-216	ENST00000577001	KDM3B	Q7LBC6	1761 aa		17.04	■□□□□ 0.32
PRPF8-216	ENST00000577001	UBN2	Q6ZU65	1347 aa		17.04	■□□□□ 0.32
PRPF8-216	ENST00000577001	STARD3NL	O95772	234 aa		17.04	■□□□□ 0.32
PRPF8-216	ENST00000577001	GTF2E1	P29083	439 aa	Predicted RBP	17.04	■□□□□ 0.32
PRPF8-216	ENST00000577001	CTSW	P56202	376 aa		17.04	■□□□□ 0.32
PRPF8-216	ENST00000577001	PPARD	Q03181	441 aa		17.04	■□□□□ 0.32
PRPF8-216	ENST00000577001	CPLX2	Q6PUV4	134 aa	Known RBP	17.04	■□□□□ 0.32
PRPF8-216	ENST00000577001	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	17.04	■□□□□ 0.32
PRPF8-216	ENST00000577001	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	17.04	■□□□□ 0.32
PRPF8-216	ENST00000577001	TFR2	Q9UP52	801 aa		17.04	■□□□□ 0.32
PRPF8-216	ENST00000577001	NFE2L3	Q9Y4A8	694 aa		17.04	■□□□□ 0.32
PRPF8-216	ENST00000577001	FANCG	O15287	622 aa		17.03	■□□□□ 0.32
PRPF8-216	ENST00000577001	KCTD19	Q17RG1	926 aa	Predicted RBP	17.03	■□□□□ 0.32
PRPF8-216	ENST00000577001	MFSD6	Q6ZSS7	791 aa		17.03	■□□□□ 0.32
PRPF8-216	ENST00000577001	ADGRA1	Q86SQ6	560 aa		17.03	■□□□□ 0.32
PRPF8-216	ENST00000577001	SMAP1	Q8IYB5	467 aa	Predicted RBP	17.03	■□□□□ 0.32
PRPF8-216	ENST00000577001	MNS1	Q8NEH6	495 aa		17.03	■□□□□ 0.32
PRPF8-216	ENST00000577001	ISCA1	Q9BUE6	129 aa		17.03	■□□□□ 0.32
PRPF8-216	ENST00000577001	PUF60	Q9UHX1	559 aa	Known RBP	17.03	■□□□□ 0.32
PRPF8-216	ENST00000577001	SH2B2	O14492	632 aa	Predicted RBP	17.03	■□□□□ 0.32
PRPF8-216	ENST00000577001	ADAMTS3	O15072	1205 aa		17.03	■□□□□ 0.32
PRPF8-216	ENST00000577001	CTIF	O43310	598 aa	Known RBP	17.03	■□□□□ 0.32
PRPF8-216	ENST00000577001	PDE8B	O95263	885 aa		17.03	■□□□□ 0.32
PRPF8-216	ENST00000577001	CYP7A1	P22680	504 aa		17.03	■□□□□ 0.32
PRPF8-216	ENST00000577001	TPM4	P67936	248 aa		17.03	■□□□□ 0.32
PRPF8-216	ENST00000577001	TFCP2L1	Q9NZI6	479 aa		17.03	■□□□□ 0.32
PRPF8-216	ENST00000577001	SPATA31A3	Q5VYP0	1347 aa		17.03	■□□□□ 0.32
PRPF8-216	ENST00000577001	TEX33	O43247	280 aa		17.02	■□□□□ 0.32
PRPF8-216	ENST00000577001	SLC39A14	Q15043	492 aa		17.02	■□□□□ 0.32
PRPF8-216	ENST00000577001	SUSD4	Q5VX71	490 aa		17.02	■□□□□ 0.32
PRPF8-216	ENST00000577001	TOGARAM2	Q6ZUX3	1019 aa		17.02	■□□□□ 0.32
PRPF8-216	ENST00000577001	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	17.02	■□□□□ 0.32
PRPF8-216	ENST00000577001	SPATA5	Q8NB90	893 aa		17.02	■□□□□ 0.32
PRPF8-216	ENST00000577001	CPVL	Q9H3G5	476 aa		17.02	■□□□□ 0.32
PRPF8-216	ENST00000577001	FAM217B	Q9NTX9	383 aa	Predicted RBP	17.02	■□□□□ 0.32
PRPF8-216	ENST00000577001		V9GY48	417 aa	Predicted RBP	17.02	■□□□□ 0.32
PRPF8-216	ENST00000577001	SLU7	O95391	586 aa	Known RBP	17.02	■□□□□ 0.32
PRPF8-216	ENST00000577001	CADPS2	Q86UW7	1296 aa		17.02	■□□□□ 0.32
PRPF8-216	ENST00000577001	STRBP	Q96SI9	672 aa	Known RBP	17.02	■□□□□ 0.32
PRPF8-216	ENST00000577001	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	17.02	■□□□□ 0.32
PRPF8-216	ENST00000577001	NCAPD2	Q15021	1401 aa		17.02	■□□□□ 0.32
PRPF8-216	ENST00000577001	MED1	Q15648	1581 aa	Predicted RBP	17.02	■□□□□ 0.31
PRPF8-216	ENST00000577001	RASGRP4	Q8TDF6	673 aa		17.02	■□□□□ 0.31
PRPF8-216	ENST00000577001	WDR24	Q96S15	920 aa		17.02	■□□□□ 0.31
PRPF8-216	ENST00000577001	LY9	Q9HBG7	655 aa		17.02	■□□□□ 0.31
PRPF8-216	ENST00000577001	TULP1	O00294	542 aa	Predicted RBP	17.01	■□□□□ 0.31
PRPF8-216	ENST00000577001	DMTN	Q08495	405 aa		17.01	■□□□□ 0.31
PRPF8-216	ENST00000577001	PAXBP1	Q9Y5B6	917 aa		17.01	■□□□□ 0.31
PRPF8-216	ENST00000577001	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	17.01	■□□□□ 0.31
PRPF8-216	ENST00000577001	PLEKHA8P1	O95397	391 aa		17.01	■□□□□ 0.31
PRPF8-216	ENST00000577001	WDR17	Q8IZU2	1322 aa		17.01	■□□□□ 0.31
PRPF8-216	ENST00000577001	TOB1	P50616	345 aa	Predicted RBP	17.01	■□□□□ 0.31
PRPF8-216	ENST00000577001	WTAP	Q15007	396 aa		17.01	■□□□□ 0.31
PRPF8-216	ENST00000577001	HSD3B7	Q9H2F3	369 aa		17.01	■□□□□ 0.31
PRPF8-216	ENST00000577001	ABL1	P00519	1130 aa		17	■□□□□ 0.31
PRPF8-216	ENST00000577001	RTN1	Q16799	776 aa		17	■□□□□ 0.31
PRPF8-216	ENST00000577001	FKBP15	Q5T1M5	1219 aa		17	■□□□□ 0.31
PRPF8-216	ENST00000577001	GIGYF2	Q6Y7W6	1299 aa	Known RBP	17	■□□□□ 0.31
PRPF8-216	ENST00000577001	IGDCC4	Q8TDY8	1250 aa		17	■□□□□ 0.31
PRPF8-216	ENST00000577001	GPR101	Q96P66	508 aa	Predicted RBP	17	■□□□□ 0.31
PRPF8-216	ENST00000577001	AGXT2	Q9BYV1	514 aa		17	■□□□□ 0.31
PRPF8-216	ENST00000577001	CSRNP2	Q9H175	543 aa		17	■□□□□ 0.31
PRPF8-216	ENST00000577001	POLR3E	Q9NVU0	708 aa		17	■□□□□ 0.31
PRPF8-216	ENST00000577001	PCCA	P05165	728 aa	Predicted RBP	17	■□□□□ 0.31
PRPF8-216	ENST00000577001	CMA1	P23946	247 aa		17	■□□□□ 0.31
PRPF8-216	ENST00000577001	ZNF446	Q9NWS9	450 aa		17	■□□□□ 0.31
PRPF8-216	ENST00000577001	NIP7	Q9Y221	180 aa	Known RBP eCLIP	17	■□□□□ 0.31
PRPF8-216	ENST00000577001	VWA3A	A6NCI4	1184 aa		16.99	■□□□□ 0.31
PRPF8-216	ENST00000577001	KLRK1	P26718	216 aa		16.99	■□□□□ 0.31
PRPF8-216	ENST00000577001	RBM6	P78332	1123 aa	Known RBP	16.99	■□□□□ 0.31
PRPF8-216	ENST00000577001	NYAP1	Q6ZVC0	841 aa		16.99	■□□□□ 0.31
PRPF8-216	ENST00000577001	RASGRP2	Q7LDG7	609 aa		16.99	■□□□□ 0.31
PRPF8-216	ENST00000577001	UBAC1	Q9BSL1	405 aa		16.99	■□□□□ 0.31
PRPF8-216	ENST00000577001	SOWAHD	A6NJG2	315 aa		16.99	■□□□□ 0.31
PRPF8-216	ENST00000577001	MYL5	Q02045	173 aa		16.99	■□□□□ 0.31
PRPF8-216	ENST00000577001	SAFB	Q15424	915 aa	Known RBP eCLIP	16.99	■□□□□ 0.31
PRPF8-216	ENST00000577001	WWC2	Q6AWC2	1192 aa		16.99	■□□□□ 0.31
PRPF8-216	ENST00000577001	RASSF8	Q8NHQ8	419 aa		16.99	■□□□□ 0.31
PRPF8-216	ENST00000577001	JCAD	Q9P266	1359 aa		16.99	■□□□□ 0.31

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms