RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 GIMAP6Q6P9H5 292 aa6.68□□□□□ -1.34
CDH13-213ENST00000569454 PI16Q6UXB8 463 aa6.68□□□□□ -1.34
CDH13-213ENST00000569454 SYNE3Q6ZMZ3 975 aa6.68□□□□□ -1.34
CDH13-213ENST00000569454 FERMT3Q86UX7 667 aa6.68□□□□□ -1.34
CDH13-213ENST00000569454 CERS3Q8IU89 383 aa6.68□□□□□ -1.34
CDH13-213ENST00000569454 SYNE4Q8N205 404 aa6.68□□□□□ -1.34
CDH13-213ENST00000569454 FAM200AQ8TCP9 573 aa6.68□□□□□ -1.34
CDH13-213ENST00000569454 STAG1Q8WVM7 1258 aa6.68□□□□□ -1.34
CDH13-213ENST00000569454 CHAMP1Q96JM3 812 aa6.68□□□□□ -1.34
CDH13-213ENST00000569454 C8orf76Q96K31 380 aa6.68□□□□□ -1.34
CDH13-213ENST00000569454 FUCA2Q9BTY2 467 aa6.68□□□□□ -1.34
CDH13-213ENST00000569454 TNMDQ9H2S6 317 aa6.68□□□□□ -1.34
CDH13-213ENST00000569454 CLSTN2Q9H4D0 955 aa6.68□□□□□ -1.34
CDH13-213ENST00000569454 RCOR1Q9UKL0 485 aa6.68□□□□□ -1.34
CDH13-213ENST00000569454 DENND2AQ9ULE3 1009 aa6.68□□□□□ -1.34
CDH13-213ENST00000569454 NAP1L2Q9ULW6 460 aaPredicted RBP6.68□□□□□ -1.34
CDH13-213ENST00000569454 NOL7Q9UMY1 257 aaKnown RBP6.68□□□□□ -1.34
CDH13-213ENST00000569454 A0A1B0GUL6 1792 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 BTAF1O14981 1849 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 A0A1W2PQ27 194 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 A0A1W2PQ64 194 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 A0A1W2PQD8 194 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 POTEB3A0JP26 581 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 ERICH2A1L162 156 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 GOLGA6L6A8MZA4 724 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 ZBTB43O43298 467 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 KINO60870 393 aaKnown RBP6.67□□□□□ -1.34
CDH13-213ENST00000569454 ZPR1O75312 459 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 MBD4O95243 580 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 CTDNEP1O95476 244 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 TDO2P48775 406 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 METAP2P50579 478 aaKnown RBP eCLIP6.67□□□□□ -1.34
CDH13-213ENST00000569454 ANTXR2P58335 489 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 HAND2P61296 217 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 COL9A3Q14050 684 aaPredicted RBP6.67□□□□□ -1.34
CDH13-213ENST00000569454 TRIM29Q14134 588 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 AKNAD1Q5T1N1 836 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 PRPF38BQ5VTL8 546 aaKnown RBP6.67□□□□□ -1.34
CDH13-213ENST00000569454 APOA5Q6Q788 366 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 POTEBQ6S5H4 581 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 TPTE2Q6XPS3 522 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.67□□□□□ -1.34
CDH13-213ENST00000569454 IFNL3Q8IZI9 196 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 MAGEB6Q8N7X4 407 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 LINC00116Q8NCU8 138 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 FBXO18Q8NFZ0 1043 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 DDX11Q96FC9 970 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 C8orf37Q96NL8 207 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 NLRP3Q96P20 1036 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 SETDB2Q96T68 719 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 NOL10Q9BSC4 688 aaKnown RBP6.67□□□□□ -1.34
CDH13-213ENST00000569454 LRRC2Q9BYS8 371 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 GPBP1L1Q9HC44 474 aaPredicted RBP6.67□□□□□ -1.34
CDH13-213ENST00000569454 RRAGDQ9NQL2 400 aaPredicted RBP6.67□□□□□ -1.34
CDH13-213ENST00000569454 POLR3EQ9NVU0 708 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 RTEL1Q9NZ71 1219 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 LRP2BPQ9P2M1 347 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 ORC3Q9UBD5 711 aaPredicted RBP6.67□□□□□ -1.34
CDH13-213ENST00000569454 USP25Q9UHP3 1055 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 ANAPC4Q9UJX5 808 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 ZKSCAN5Q9Y2L8 839 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 RTCBQ9Y3I0 505 aaKnown RBP6.67□□□□□ -1.34
CDH13-213ENST00000569454 MYH15Q9Y2K3 1946 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 KAT6BQ8WYB5 2073 aa6.67□□□□□ -1.34
CDH13-213ENST00000569454 TCHHQ07283 1943 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 FAM205CA6NFA0 338 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 CCDC69A6NI79 296 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 ZNF500O60304 480 aaPredicted RBP6.66□□□□□ -1.34
CDH13-213ENST00000569454 PTMAP06454 111 aaKnown RBP6.66□□□□□ -1.34
CDH13-213ENST00000569454 BAG6P46379 1132 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 NUBP1P53384 320 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 CCT2P78371 535 aaKnown RBP6.66□□□□□ -1.34
CDH13-213ENST00000569454 FAM160A1Q05DH4 1040 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 TYRO3Q06418 890 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 TMEM67Q5HYA8 995 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 SASS6Q6UVJ0 657 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 MFSD6Q6ZSS7 791 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 NBPF5PQ86XG9 351 aaPredicted RBP6.66□□□□□ -1.34
CDH13-213ENST00000569454 VPS37DQ86XT2 251 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 TBC1D10CQ8IV04 446 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 TRIM22Q8IYM9 498 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 RNF214Q8ND24 703 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 ESR2Q92731 530 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 BRIP1Q9BX63 1249 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 EPB41L4AQ9HCS5 686 aaPredicted RBP6.66□□□□□ -1.34
CDH13-213ENST00000569454 SEC31BQ9NQW1 1179 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 DACT1Q9NYF0 836 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 CCNL1Q9UK58 526 aaPredicted RBP6.66□□□□□ -1.34
CDH13-213ENST00000569454 USP21Q9UK80 565 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 HPS5Q9UPZ3 1129 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 SLC12A7Q9Y666 1083 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 LY75O60449 1722 aa6.66□□□□□ -1.34
CDH13-213ENST00000569454 C4AP0C0L4 1744 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 C4BP0C0L5 1744 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 GOLGA8AA7E2F4 631 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 GSG1L2A8MUP6 293 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 IFIT3O14879 490 aaKnown RBP6.65□□□□□ -1.34
CDH13-213ENST00000569454 GNPATO15228 680 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 KCNQ2O43526 872 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 KDM4AO75164 1064 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms