RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 LEO1Q8WVC0 666 aaPredicted RBP20.65■□□□□ 0.9
NEIL1-221ENST00000569035 PDLIM2Q96JY6 352 aa20.65■□□□□ 0.9
NEIL1-221ENST00000569035 NAP1L2Q9ULW6 460 aaPredicted RBP20.65■□□□□ 0.9
NEIL1-221ENST00000569035 CTDNEP1O95476 244 aa20.64■□□□□ 0.9
NEIL1-221ENST00000569035 BRAPQ7Z569 592 aa20.64■□□□□ 0.9
NEIL1-221ENST00000569035 FERMT3Q86UX7 667 aa20.64■□□□□ 0.9
NEIL1-221ENST00000569035 SGMS1Q86VZ5 419 aa20.64■□□□□ 0.9
NEIL1-221ENST00000569035 PIM2Q9P1W9 311 aa20.64■□□□□ 0.9
NEIL1-221ENST00000569035 GOLGA8BA8MQT2 603 aa20.64■□□□□ 0.89
NEIL1-221ENST00000569035 MBD4O95243 580 aa20.64■□□□□ 0.89
NEIL1-221ENST00000569035 CAVIN2O95810 425 aa20.64■□□□□ 0.89
NEIL1-221ENST00000569035 GIMAP6Q6P9H5 292 aa20.64■□□□□ 0.89
NEIL1-221ENST00000569035 C15orf52Q6ZUT6 534 aaKnown RBP20.64■□□□□ 0.89
NEIL1-221ENST00000569035 DDX11Q96FC9 970 aa20.64■□□□□ 0.89
NEIL1-221ENST00000569035 RIMBP2O15034 1052 aa20.63■□□□□ 0.89
NEIL1-221ENST00000569035 CCT2P78371 535 aaKnown RBP20.63■□□□□ 0.89
NEIL1-221ENST00000569035 PPP2R5BQ15173 497 aa20.63■□□□□ 0.89
NEIL1-221ENST00000569035 AKNAD1Q5T1N1 836 aa20.63■□□□□ 0.89
NEIL1-221ENST00000569035 SYNE3Q6ZMZ3 975 aa20.63■□□□□ 0.89
NEIL1-221ENST00000569035 UTRNP46939 3433 aa20.63■□□□□ 0.89
NEIL1-221ENST00000569035 MYH13Q9UKX3 1938 aa20.62■□□□□ 0.89
NEIL1-221ENST00000569035 SH2B2O14492 632 aaPredicted RBP20.62■□□□□ 0.89
NEIL1-221ENST00000569035 CCDC192P0DO97 292 aa20.62■□□□□ 0.89
NEIL1-221ENST00000569035 ANTXR2P58335 489 aa20.62■□□□□ 0.89
NEIL1-221ENST00000569035 MFSD6Q6ZSS7 791 aa20.62■□□□□ 0.89
NEIL1-221ENST00000569035 STAG1Q8WVM7 1258 aa20.62■□□□□ 0.89
NEIL1-221ENST00000569035 CTAGE5O15320 804 aa20.62■□□□□ 0.89
NEIL1-221ENST00000569035 NUP62CLQ9H1M0 184 aa20.62■□□□□ 0.89
NEIL1-221ENST00000569035 RCOR1Q9UKL0 485 aa20.62■□□□□ 0.89
NEIL1-221ENST00000569035 SLX4Q8IY92 1834 aa20.62■□□□□ 0.89
NEIL1-221ENST00000569035 NID2Q14112 1375 aa20.61■□□□□ 0.89
NEIL1-221ENST00000569035 ERICH2A1L162 156 aa20.61■□□□□ 0.89
NEIL1-221ENST00000569035 TDO2P48775 406 aa20.61■□□□□ 0.89
NEIL1-221ENST00000569035 ZNF804AQ7Z570 1209 aa20.61■□□□□ 0.89
NEIL1-221ENST00000569035 WASF1Q92558 559 aa20.61■□□□□ 0.89
NEIL1-221ENST00000569035 C8orf76Q96K31 380 aa20.61■□□□□ 0.89
NEIL1-221ENST00000569035 ANAPC4Q9UJX5 808 aa20.61■□□□□ 0.89
NEIL1-221ENST00000569035 SLC4A4Q9Y6R1 1079 aa20.61■□□□□ 0.89
NEIL1-221ENST00000569035 GSG1L2A8MUP6 293 aa20.6■□□□□ 0.89
NEIL1-221ENST00000569035 METAP2P50579 478 aaKnown RBP eCLIP20.6■□□□□ 0.89
NEIL1-221ENST00000569035 MAP3K11Q16584 847 aa20.6■□□□□ 0.89
NEIL1-221ENST00000569035 DALRD3Q5D0E6 543 aaKnown RBP20.6■□□□□ 0.89
NEIL1-221ENST00000569035 CC2D2BQ6DHV5 1058 aa20.6■□□□□ 0.89
NEIL1-221ENST00000569035 NLGN2Q8NFZ4 835 aa20.6■□□□□ 0.89
NEIL1-221ENST00000569035 ZC3H12CQ9C0D7 883 aaKnown RBP20.6■□□□□ 0.89
NEIL1-221ENST00000569035 MAST2Q6P0Q8 1798 aa20.6■□□□□ 0.89
NEIL1-221ENST00000569035 MAGEB6P1A0A0J9YX57 407 aa20.59■□□□□ 0.89
NEIL1-221ENST00000569035 CCDC196A0A1B0GTZ2 297 aa20.59■□□□□ 0.89
NEIL1-221ENST00000569035 ESPNB1AK53 854 aa20.59■□□□□ 0.89
NEIL1-221ENST00000569035 SPTY2D1Q68D10 685 aaPredicted RBP20.59■□□□□ 0.89
NEIL1-221ENST00000569035 CHST3Q7LGC8 479 aa20.59■□□□□ 0.89
NEIL1-221ENST00000569035 TBC1D10CQ8IV04 446 aa20.59■□□□□ 0.89
NEIL1-221ENST00000569035 ORC3Q9UBD5 711 aaPredicted RBP20.59■□□□□ 0.89
NEIL1-221ENST00000569035 JAG2Q9Y219 1238 aa20.59■□□□□ 0.89
NEIL1-221ENST00000569035 STK36Q9NRP7 1315 aa20.59■□□□□ 0.89
NEIL1-221ENST00000569035 CYP7A1P22680 504 aa20.59■□□□□ 0.89
NEIL1-221ENST00000569035 CLCN1P35523 988 aa20.59■□□□□ 0.89
NEIL1-221ENST00000569035 CHAF1AQ13111 956 aaPredicted RBP20.59■□□□□ 0.89
NEIL1-221ENST00000569035 FBXO18Q8NFZ0 1043 aa20.59■□□□□ 0.89
NEIL1-221ENST00000569035 TDRD7Q8NHU6 1098 aaKnown RBP20.59■□□□□ 0.89
NEIL1-221ENST00000569035 CD209Q9NNX6 404 aa20.59■□□□□ 0.89
NEIL1-221ENST00000569035 HPS5Q9UPZ3 1129 aa20.59■□□□□ 0.89
NEIL1-221ENST00000569035 CCDC88AQ3V6T2 1871 aa20.58■□□□□ 0.89
NEIL1-221ENST00000569035 ZBTB43O43298 467 aa20.58■□□□□ 0.89
NEIL1-221ENST00000569035 BICD2Q8TD16 824 aa20.58■□□□□ 0.89
NEIL1-221ENST00000569035 IGDCC4Q8TDY8 1250 aa20.58■□□□□ 0.89
NEIL1-221ENST00000569035 RTFDC1Q9BY42 306 aaPredicted RBP20.58■□□□□ 0.89
NEIL1-221ENST00000569035 NBPF3Q9H094 633 aa20.58■□□□□ 0.89
NEIL1-221ENST00000569035 ARMT1Q9H993 441 aa20.58■□□□□ 0.89
NEIL1-221ENST00000569035 RAI14Q9P0K7 980 aa20.58■□□□□ 0.89
NEIL1-221ENST00000569035 LRRC37AA6NMS7 1700 aa20.58■□□□□ 0.88
NEIL1-221ENST00000569035 KIAA1551Q9HCM1 1747 aa20.58■□□□□ 0.88
NEIL1-221ENST00000569035 KIF13BQ9NQT8 1826 aa20.58■□□□□ 0.88
NEIL1-221ENST00000569035 DUOX1Q9NRD9 1551 aa20.57■□□□□ 0.88
NEIL1-221ENST00000569035 CCDC69A6NI79 296 aa20.57■□□□□ 0.88
NEIL1-221ENST00000569035 DOK7Q18PE1 504 aa20.57■□□□□ 0.88
NEIL1-221ENST00000569035 CCDC93Q567U6 631 aa20.57■□□□□ 0.88
NEIL1-221ENST00000569035 APOA5Q6Q788 366 aa20.57■□□□□ 0.88
NEIL1-221ENST00000569035 EYA3Q99504 573 aa20.57■□□□□ 0.88
NEIL1-221ENST00000569035 FUCA2Q9BTY2 467 aa20.57■□□□□ 0.88
NEIL1-221ENST00000569035 NCOA5Q9HCD5 579 aaKnown RBP20.57■□□□□ 0.88
NEIL1-221ENST00000569035 CCDC39Q9UFE4 941 aa20.57■□□□□ 0.88
NEIL1-221ENST00000569035 COL1A1P02452 1464 aaPredicted RBP20.57■□□□□ 0.88
NEIL1-221ENST00000569035 YEATS4O95619 227 aa20.57■□□□□ 0.88
NEIL1-221ENST00000569035 TMEM67Q5HYA8 995 aa20.57■□□□□ 0.88
NEIL1-221ENST00000569035 NFXL1Q6ZNB6 911 aa20.57■□□□□ 0.88
NEIL1-221ENST00000569035 RBM43Q6ZSC3 357 aaKnown RBP20.57■□□□□ 0.88
NEIL1-221ENST00000569035 CERS3Q8IU89 383 aa20.57■□□□□ 0.88
NEIL1-221ENST00000569035 KCNG4Q8TDN1 519 aa20.57■□□□□ 0.88
NEIL1-221ENST00000569035 TNMDQ9H2S6 317 aa20.57■□□□□ 0.88
NEIL1-221ENST00000569035 EPB41L4AQ9HCS5 686 aaPredicted RBP20.57■□□□□ 0.88
NEIL1-221ENST00000569035 RTEL1Q9NZ71 1219 aa20.57■□□□□ 0.88
NEIL1-221ENST00000569035 TFIP11Q9UBB9 837 aaKnown RBP20.57■□□□□ 0.88
NEIL1-221ENST00000569035 ABCF2Q9UG63 623 aa20.57■□□□□ 0.88
NEIL1-221ENST00000569035 SLC12A7Q9Y666 1083 aa20.57■□□□□ 0.88
NEIL1-221ENST00000569035 B4E1Z4 1266 aa20.56■□□□□ 0.88
NEIL1-221ENST00000569035 FDPSP14324 419 aaKnown RBP20.56■□□□□ 0.88
NEIL1-221ENST00000569035 IL1R1P14778 569 aa20.56■□□□□ 0.88
NEIL1-221ENST00000569035 TRIM29Q14134 588 aa20.56■□□□□ 0.88
NEIL1-221ENST00000569035 ZSCAN30Q86W11 494 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms