RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 POLA2Q14181 598 aa18.73■□□□□ 0.59
SMPD3-208ENST00000566723 PI16Q6UXB8 463 aa18.73■□□□□ 0.59
SMPD3-208ENST00000566723 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.73■□□□□ 0.59
SMPD3-208ENST00000566723 ZNF384Q8TF68 577 aa18.73■□□□□ 0.59
SMPD3-208ENST00000566723 KCNH4Q9UQ05 1017 aa18.73■□□□□ 0.59
SMPD3-208ENST00000566723 ZBED9Q6R2W3 1325 aa18.73■□□□□ 0.59
SMPD3-208ENST00000566723 TLR2O60603 784 aa18.72■□□□□ 0.59
SMPD3-208ENST00000566723 ITPRIPQ8IWB1 547 aa18.72■□□□□ 0.59
SMPD3-208ENST00000566723 SSH3Q8TE77 659 aa18.72■□□□□ 0.59
SMPD3-208ENST00000566723 DDX4Q9NQI0 724 aaKnown RBP18.72■□□□□ 0.59
SMPD3-208ENST00000566723 FOCADQ5VW36 1801 aa18.72■□□□□ 0.59
SMPD3-208ENST00000566723 GPR75-ASB3A0A0A6YYF3 556 aa18.71■□□□□ 0.59
SMPD3-208ENST00000566723 UQCRFS1P1P0C7P4 283 aa18.71■□□□□ 0.59
SMPD3-208ENST00000566723 MCAMP43121 646 aa18.71■□□□□ 0.59
SMPD3-208ENST00000566723 PICALMQ13492 652 aa18.71■□□□□ 0.59
SMPD3-208ENST00000566723 ARHGEF6Q15052 776 aa18.71■□□□□ 0.59
SMPD3-208ENST00000566723 SH3BP5LQ7L8J4 393 aa18.71■□□□□ 0.59
SMPD3-208ENST00000566723 ZSCAN29Q8IWY8 852 aaPredicted RBP18.71■□□□□ 0.59
SMPD3-208ENST00000566723 C1orf115Q9H7X2 142 aa18.71■□□□□ 0.59
SMPD3-208ENST00000566723 GPR108Q9NPR9 543 aa18.71■□□□□ 0.59
SMPD3-208ENST00000566723 COL2A1P02458 1487 aaPredicted RBP18.71■□□□□ 0.59
SMPD3-208ENST00000566723 PHF20L1A8MW92 1017 aa18.7■□□□□ 0.58
SMPD3-208ENST00000566723 MGAMO43451 1857 aa18.7■□□□□ 0.58
SMPD3-208ENST00000566723 RLBP1P12271 317 aa18.7■□□□□ 0.58
SMPD3-208ENST00000566723 RHBDL3P58872 404 aa18.7■□□□□ 0.58
SMPD3-208ENST00000566723 GSTO1P78417 241 aa18.7■□□□□ 0.58
SMPD3-208ENST00000566723 ATP8B2P98198 1209 aa18.7■□□□□ 0.58
SMPD3-208ENST00000566723 OS9Q13438 667 aaPredicted RBP18.7■□□□□ 0.58
SMPD3-208ENST00000566723 TBC1D9Q6ZT07 1266 aa18.7■□□□□ 0.58
SMPD3-208ENST00000566723 ANKRD23Q86SG2 305 aa18.7■□□□□ 0.58
SMPD3-208ENST00000566723 ARMC5Q96C12 935 aa18.7■□□□□ 0.58
SMPD3-208ENST00000566723 NSUN4Q96CB9 384 aaKnown RBP18.7■□□□□ 0.58
SMPD3-208ENST00000566723 DDTLA6NHG4 134 aaPredicted RBP18.69■□□□□ 0.58
SMPD3-208ENST00000566723 LDHCP07864 332 aa18.69■□□□□ 0.58
SMPD3-208ENST00000566723 MAP3K10Q02779 954 aa18.69■□□□□ 0.58
SMPD3-208ENST00000566723 TNNI3KQ59H18 835 aa18.69■□□□□ 0.58
SMPD3-208ENST00000566723 SCYL3Q8IZE3 742 aa18.69■□□□□ 0.58
SMPD3-208ENST00000566723 RAI14Q9P0K7 980 aa18.69■□□□□ 0.58
SMPD3-208ENST00000566723 FPGT-TNNI3KV9GXZ4 949 aa18.69■□□□□ 0.58
SMPD3-208ENST00000566723 SIPA1L1O43166 1804 aa18.68■□□□□ 0.58
SMPD3-208ENST00000566723 NPM3O75607 178 aaKnown RBP18.68■□□□□ 0.58
SMPD3-208ENST00000566723 MAP4K4O95819 1239 aaPredicted RBP18.68■□□□□ 0.58
SMPD3-208ENST00000566723 LACTBP83111 547 aaPredicted RBP18.68■□□□□ 0.58
SMPD3-208ENST00000566723 MOGSQ13724 837 aa18.68■□□□□ 0.58
SMPD3-208ENST00000566723 PICK1Q9NRD5 415 aa18.68■□□□□ 0.58
SMPD3-208ENST00000566723 PDHXO00330 501 aa18.67■□□□□ 0.58
SMPD3-208ENST00000566723 CXCL11O14625 94 aa18.67■□□□□ 0.58
SMPD3-208ENST00000566723 ZBTB7BO15156 539 aaPredicted RBP18.67■□□□□ 0.58
SMPD3-208ENST00000566723 SURF6O75683 361 aaKnown RBP18.67■□□□□ 0.58
SMPD3-208ENST00000566723 KIF22Q14807 665 aa18.67■□□□□ 0.58
SMPD3-208ENST00000566723 TTC39AQ5SRH9 613 aa18.67■□□□□ 0.58
SMPD3-208ENST00000566723 DBNDD2Q9BQY9 259 aa18.67■□□□□ 0.58
SMPD3-208ENST00000566723 LRP2BPQ9P2M1 347 aa18.67■□□□□ 0.58
SMPD3-208ENST00000566723 NOP58Q9Y2X3 529 aaKnown RBP18.67■□□□□ 0.58
SMPD3-208ENST00000566723 PTCH2Q9Y6C5 1203 aa18.67■□□□□ 0.58
SMPD3-208ENST00000566723 ADGRA2Q96PE1 1338 aa18.67■□□□□ 0.58
SMPD3-208ENST00000566723 LOC285556D6RIA3 1793 aa18.66■□□□□ 0.58
SMPD3-208ENST00000566723 PTPRAP18433 802 aa18.66■□□□□ 0.58
SMPD3-208ENST00000566723 CCDC158Q5M9N0 1113 aa18.66■□□□□ 0.58
SMPD3-208ENST00000566723 C17orf99Q6UX52 265 aa18.66■□□□□ 0.58
SMPD3-208ENST00000566723 ARHGAP39Q9C0H5 1083 aa18.66■□□□□ 0.58
SMPD3-208ENST00000566723 ZHX2Q9Y6X8 837 aa18.66■□□□□ 0.58
SMPD3-208ENST00000566723 A0A0G2JLL6 359 aaPredicted RBP18.65■□□□□ 0.58
SMPD3-208ENST00000566723 POTEFA5A3E0 1075 aa18.65■□□□□ 0.58
SMPD3-208ENST00000566723 CTNND1O60716 968 aaKnown RBP18.65■□□□□ 0.58
SMPD3-208ENST00000566723 SLURP2P0DP57 97 aa18.65■□□□□ 0.58
SMPD3-208ENST00000566723 SLC9C1Q4G0N8 1177 aa18.65■□□□□ 0.58
SMPD3-208ENST00000566723 PRRT2Q7Z6L0 340 aaPredicted RBP18.65■□□□□ 0.58
SMPD3-208ENST00000566723 ZNF333Q96JL9 665 aa18.65■□□□□ 0.58
SMPD3-208ENST00000566723 PARK7Q99497 189 aaKnown RBP18.65■□□□□ 0.58
SMPD3-208ENST00000566723 OSBPL5Q9H0X9 879 aaPredicted RBP18.65■□□□□ 0.58
SMPD3-208ENST00000566723 CPA4Q9UI42 421 aa18.65■□□□□ 0.58
SMPD3-208ENST00000566723 TBC1D12O60347 775 aa18.64■□□□□ 0.57
SMPD3-208ENST00000566723 GNRH1P01148 92 aa18.64■□□□□ 0.57
SMPD3-208ENST00000566723 GPAT2Q6NUI2 795 aa18.64■□□□□ 0.57
SMPD3-208ENST00000566723 TEX11Q8IYF3 940 aa18.64■□□□□ 0.57
SMPD3-208ENST00000566723 ZNF512BQ96KM6 892 aaPredicted RBP18.64■□□□□ 0.57
SMPD3-208ENST00000566723 NOL10Q9BSC4 688 aaKnown RBP18.64■□□□□ 0.57
SMPD3-208ENST00000566723 SNRKQ9NRH2 765 aa18.64■□□□□ 0.57
SMPD3-208ENST00000566723 AFG3L2Q9Y4W6 797 aa18.64■□□□□ 0.57
SMPD3-208ENST00000566723 MYH1P12882 1939 aa18.63■□□□□ 0.57
SMPD3-208ENST00000566723 PRPF38BQ5VTL8 546 aaKnown RBP18.63■□□□□ 0.57
SMPD3-208ENST00000566723 NAA16Q6N069 864 aaPredicted RBP18.63■□□□□ 0.57
SMPD3-208ENST00000566723 CEP85Q6P2H3 762 aa18.63■□□□□ 0.57
SMPD3-208ENST00000566723 FASTKD5Q7L8L6 764 aaKnown RBP18.63■□□□□ 0.57
SMPD3-208ENST00000566723 NBPF11Q86T75 865 aa18.63■□□□□ 0.57
SMPD3-208ENST00000566723 DBNLQ9UJU6 430 aaKnown RBP18.63■□□□□ 0.57
SMPD3-208ENST00000566723 FAM196BA6NMK8 535 aa18.62■□□□□ 0.57
SMPD3-208ENST00000566723 CYP2E1P05181 493 aaPredicted RBP18.62■□□□□ 0.57
SMPD3-208ENST00000566723 PRMT2P55345 433 aa18.62■□□□□ 0.57
SMPD3-208ENST00000566723 PANK1Q8TE04 598 aa18.62■□□□□ 0.57
SMPD3-208ENST00000566723 SH3RF3Q8TEJ3 882 aaPredicted RBP18.62■□□□□ 0.57
SMPD3-208ENST00000566723 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.62■□□□□ 0.57
SMPD3-208ENST00000566723 TLR7Q9NYK1 1049 aaKnown RBP18.62■□□□□ 0.57
SMPD3-208ENST00000566723 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.62■□□□□ 0.57
SMPD3-208ENST00000566723 IGSF3O75054 1194 aa18.61■□□□□ 0.57
SMPD3-208ENST00000566723 BAG3O95817 575 aa18.61■□□□□ 0.57
SMPD3-208ENST00000566723 PLCG2P16885 1265 aa18.61■□□□□ 0.57
SMPD3-208ENST00000566723 CTGFP29279 349 aa18.61■□□□□ 0.57
SMPD3-208ENST00000566723 GADL1Q6ZQY3 521 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms