RNA–Protein interactions for RNA: ENST00000564732.1

ATP2A1-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 5

Gene ATP2A1, Length 831 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-208ENST00000564732 SLF2Q8IX21 1173 aa17.6■□□□□ 0.41
ATP2A1-208ENST00000564732 SCYL3Q8IZE3 742 aa17.6■□□□□ 0.41
ATP2A1-208ENST00000564732 SH3TC2Q8TF17 1288 aa17.6■□□□□ 0.41
ATP2A1-208ENST00000564732 ZNF384Q8TF68 577 aa17.6■□□□□ 0.41
ATP2A1-208ENST00000564732 TMEM106CQ9BVX2 250 aa17.6■□□□□ 0.41
ATP2A1-208ENST00000564732 MGAMO43451 1857 aa17.59■□□□□ 0.41
ATP2A1-208ENST00000564732 MAST2Q6P0Q8 1798 aa17.59■□□□□ 0.41
ATP2A1-208ENST00000564732 DDTLA6NHG4 134 aaPredicted RBP17.59■□□□□ 0.41
ATP2A1-208ENST00000564732 BCAR3O75815 825 aa17.59■□□□□ 0.41
ATP2A1-208ENST00000564732 ECM2O94769 699 aaPredicted RBP17.59■□□□□ 0.41
ATP2A1-208ENST00000564732 SLURP2P0DP57 97 aa17.59■□□□□ 0.41
ATP2A1-208ENST00000564732 MAP3K10Q02779 954 aa17.59■□□□□ 0.41
ATP2A1-208ENST00000564732 MECOMQ03112 1051 aa17.59■□□□□ 0.41
ATP2A1-208ENST00000564732 SPTY2D1Q68D10 685 aaPredicted RBP17.59■□□□□ 0.41
ATP2A1-208ENST00000564732 PI16Q6UXB8 463 aa17.59■□□□□ 0.41
ATP2A1-208ENST00000564732 ATF7IPQ6VMQ6 1270 aa17.59■□□□□ 0.41
ATP2A1-208ENST00000564732 ZSCAN29Q8IWY8 852 aaPredicted RBP17.59■□□□□ 0.41
ATP2A1-208ENST00000564732 PNMA6EA0A0J9YXQ4 647 aa17.58■□□□□ 0.4
ATP2A1-208ENST00000564732 CXCL11O14625 94 aa17.58■□□□□ 0.4
ATP2A1-208ENST00000564732 IPO8O15397 1037 aaKnown RBP17.58■□□□□ 0.4
ATP2A1-208ENST00000564732 MYCP01106 439 aaPredicted RBP17.58■□□□□ 0.4
ATP2A1-208ENST00000564732 GNAI2P04899 355 aa17.58■□□□□ 0.4
ATP2A1-208ENST00000564732 PTPRAP18433 802 aa17.58■□□□□ 0.4
ATP2A1-208ENST00000564732 PRMT2P55345 433 aa17.58■□□□□ 0.4
ATP2A1-208ENST00000564732 RHBDL3P58872 404 aa17.58■□□□□ 0.4
ATP2A1-208ENST00000564732 PICALMQ13492 652 aa17.58■□□□□ 0.4
ATP2A1-208ENST00000564732 GPAT2Q6NUI2 795 aa17.58■□□□□ 0.4
ATP2A1-208ENST00000564732 ERICH6Q7L0X2 663 aa17.58■□□□□ 0.4
ATP2A1-208ENST00000564732 TRIM47Q96LD4 638 aa17.58■□□□□ 0.4
ATP2A1-208ENST00000564732 PARK7Q99497 189 aaKnown RBP17.58■□□□□ 0.4
ATP2A1-208ENST00000564732 HMG20BQ9P0W2 317 aa17.58■□□□□ 0.4
ATP2A1-208ENST00000564732 GPR75-ASB3A0A0A6YYF3 556 aa17.57■□□□□ 0.4
ATP2A1-208ENST00000564732 A0A0G2JLL6 359 aaPredicted RBP17.57■□□□□ 0.4
ATP2A1-208ENST00000564732 ARID4AP29374 1257 aaPredicted RBP17.57■□□□□ 0.4
ATP2A1-208ENST00000564732 PSMC4P43686 418 aa17.57■□□□□ 0.4
ATP2A1-208ENST00000564732 SLC4A8Q2Y0W8 1093 aa17.57■□□□□ 0.4
ATP2A1-208ENST00000564732 PRRT2Q7Z6L0 340 aaPredicted RBP17.57■□□□□ 0.4
ATP2A1-208ENST00000564732 SPATA5Q8NB90 893 aa17.57■□□□□ 0.4
ATP2A1-208ENST00000564732 FRAT1Q92837 279 aaPredicted RBP17.57■□□□□ 0.4
ATP2A1-208ENST00000564732 CLUAP1Q96AJ1 413 aa17.57■□□□□ 0.4
ATP2A1-208ENST00000564732 NEUROD6Q96NK8 337 aa17.57■□□□□ 0.4
ATP2A1-208ENST00000564732 PICK1Q9NRD5 415 aa17.57■□□□□ 0.4
ATP2A1-208ENST00000564732 SRRDQ9UH36 339 aa17.57■□□□□ 0.4
ATP2A1-208ENST00000564732 ZHX2Q9Y6X8 837 aa17.57■□□□□ 0.4
ATP2A1-208ENST00000564732 COL2A1P02458 1487 aaPredicted RBP17.56■□□□□ 0.4
ATP2A1-208ENST00000564732 ATAD5Q96QE3 1844 aa17.56■□□□□ 0.4
ATP2A1-208ENST00000564732 CYP2C8P10632 490 aa17.56■□□□□ 0.4
ATP2A1-208ENST00000564732 BCRP11274 1271 aa17.56■□□□□ 0.4
ATP2A1-208ENST00000564732 OSBPP22059 807 aa17.56■□□□□ 0.4
ATP2A1-208ENST00000564732 AFG3L2Q9Y4W6 797 aa17.56■□□□□ 0.4
ATP2A1-208ENST00000564732 TBC1D9Q6ZT07 1266 aa17.55■□□□□ 0.4
ATP2A1-208ENST00000564732 NSUN4Q96CB9 384 aaKnown RBP17.55■□□□□ 0.4
ATP2A1-208ENST00000564732 GCC1Q96CN9 775 aa17.55■□□□□ 0.4
ATP2A1-208ENST00000564732 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.55■□□□□ 0.4
ATP2A1-208ENST00000564732 LOC285556D6RIA3 1793 aa17.55■□□□□ 0.4
ATP2A1-208ENST00000564732 SIPA1L1O43166 1804 aa17.54■□□□□ 0.4
ATP2A1-208ENST00000564732 MYPNQ86TC9 1320 aa17.54■□□□□ 0.4
ATP2A1-208ENST00000564732 CTNND1O60716 968 aaKnown RBP17.54■□□□□ 0.4
ATP2A1-208ENST00000564732 NPM3O75607 178 aaKnown RBP17.54■□□□□ 0.4
ATP2A1-208ENST00000564732 FMNL1O95466 1100 aaPredicted RBP17.54■□□□□ 0.4
ATP2A1-208ENST00000564732 MCAMP43121 646 aa17.54■□□□□ 0.4
ATP2A1-208ENST00000564732 GORABQ5T7V8 394 aa17.54■□□□□ 0.4
ATP2A1-208ENST00000564732 FASTKD5Q7L8L6 764 aaKnown RBP17.54■□□□□ 0.4
ATP2A1-208ENST00000564732 TMEM57Q8N5G2 664 aa17.54■□□□□ 0.4
ATP2A1-208ENST00000564732 PCDH10Q9P2E7 1040 aa17.54■□□□□ 0.4
ATP2A1-208ENST00000564732 CDK5RAP2Q96SN8 1893 aa17.53■□□□□ 0.4
ATP2A1-208ENST00000564732 FAM196BA6NMK8 535 aa17.53■□□□□ 0.4
ATP2A1-208ENST00000564732 GSTO1P78417 241 aa17.53■□□□□ 0.4
ATP2A1-208ENST00000564732 G3BP1Q13283 466 aaKnown RBP eCLIP17.53■□□□□ 0.4
ATP2A1-208ENST00000564732 MTFR1Q15390 333 aa17.53■□□□□ 0.4
ATP2A1-208ENST00000564732 GADL1Q6ZQY3 521 aa17.53■□□□□ 0.4
ATP2A1-208ENST00000564732 CCDC84Q86UT8 332 aaPredicted RBP17.53■□□□□ 0.4
ATP2A1-208ENST00000564732 SLC45A1Q9Y2W3 748 aa17.53■□□□□ 0.4
ATP2A1-208ENST00000564732 FOCADQ5VW36 1801 aa17.52■□□□□ 0.4
ATP2A1-208ENST00000564732 TRIM75PA6NK02 468 aa17.52■□□□□ 0.4
ATP2A1-208ENST00000564732 TBC1D12O60347 775 aa17.52■□□□□ 0.4
ATP2A1-208ENST00000564732 HOXD10P28358 340 aa17.52■□□□□ 0.4
ATP2A1-208ENST00000564732 FCGRTP55899 365 aa17.52■□□□□ 0.4
ATP2A1-208ENST00000564732 PRKCZQ05513 592 aa17.52■□□□□ 0.4
ATP2A1-208ENST00000564732 POLA2Q14181 598 aa17.52■□□□□ 0.4
ATP2A1-208ENST00000564732 ZKSCAN2Q63HK3 967 aa17.52■□□□□ 0.4
ATP2A1-208ENST00000564732 RAET1EQ8TD07 263 aa17.52■□□□□ 0.4
ATP2A1-208ENST00000564732 SHISA4Q96DD7 197 aa17.52■□□□□ 0.4
ATP2A1-208ENST00000564732 OSBPL5Q9H0X9 879 aaPredicted RBP17.52■□□□□ 0.4
ATP2A1-208ENST00000564732 RAI14Q9P0K7 980 aa17.52■□□□□ 0.4
ATP2A1-208ENST00000564732 MAP4K4O95819 1239 aaPredicted RBP17.51■□□□□ 0.39
ATP2A1-208ENST00000564732 LDHCP07864 332 aa17.51■□□□□ 0.39
ATP2A1-208ENST00000564732 UQCRFS1P1P0C7P4 283 aa17.51■□□□□ 0.39
ATP2A1-208ENST00000564732 GRK4P32298 578 aa17.51■□□□□ 0.39
ATP2A1-208ENST00000564732 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.51■□□□□ 0.39
ATP2A1-208ENST00000564732 MYO5AQ9Y4I1 1855 aaKnown RBP17.51■□□□□ 0.39
ATP2A1-208ENST00000564732 TNNI3KQ59H18 835 aa17.5■□□□□ 0.39
ATP2A1-208ENST00000564732 HABP4Q5JVS0 413 aaKnown RBP17.5■□□□□ 0.39
ATP2A1-208ENST00000564732 GABRQQ9UN88 632 aa17.5■□□□□ 0.39
ATP2A1-208ENST00000564732 AGTPBP1Q9UPW5 1226 aa17.5■□□□□ 0.39
ATP2A1-208ENST00000564732 FPGT-TNNI3KV9GXZ4 949 aa17.5■□□□□ 0.39
ATP2A1-208ENST00000564732 TEX11Q8IYF3 940 aa17.49■□□□□ 0.39
ATP2A1-208ENST00000564732 SSH3Q8TE77 659 aa17.49■□□□□ 0.39
ATP2A1-208ENST00000564732 SH3RF3Q8TEJ3 882 aaPredicted RBP17.49■□□□□ 0.39
ATP2A1-208ENST00000564732 DBNDD2Q9BQY9 259 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms