RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 SLURP2P0DP57 97 aa18.11■□□□□ 0.49
RPUSD1-204ENST00000563560 GSTO1P78417 241 aa18.11■□□□□ 0.49
RPUSD1-204ENST00000563560 MAP3K9P80192 1104 aa18.11■□□□□ 0.49
RPUSD1-204ENST00000563560 MKRN3Q13064 507 aaKnown RBP18.11■□□□□ 0.49
RPUSD1-204ENST00000563560 SLC10A4Q96EP9 437 aa18.11■□□□□ 0.49
RPUSD1-204ENST00000563560 LRP2BPQ9P2M1 347 aa18.11■□□□□ 0.49
RPUSD1-204ENST00000563560 MIGA2Q7L4E1 593 aa18.1■□□□□ 0.49
RPUSD1-204ENST00000563560 CLASRPQ8N2M8 674 aaKnown RBP18.1■□□□□ 0.49
RPUSD1-204ENST00000563560 CRBNQ96SW2 442 aa18.1■□□□□ 0.49
RPUSD1-204ENST00000563560 PTPN18Q99952 460 aa18.1■□□□□ 0.49
RPUSD1-204ENST00000563560 ELP3Q9H9T3 547 aa18.1■□□□□ 0.49
RPUSD1-204ENST00000563560 RAI14Q9P0K7 980 aa18.1■□□□□ 0.49
RPUSD1-204ENST00000563560 SPDYE5A6NIY4 337 aa18.09■□□□□ 0.49
RPUSD1-204ENST00000563560 APBB1O00213 710 aa18.09■□□□□ 0.49
RPUSD1-204ENST00000563560 IGF2BP3O00425 579 aaKnown RBP eCLIP18.09■□□□□ 0.49
RPUSD1-204ENST00000563560 TRPA1O75762 1119 aa18.09■□□□□ 0.49
RPUSD1-204ENST00000563560 LDHCP07864 332 aa18.09■□□□□ 0.49
RPUSD1-204ENST00000563560 IFFO2Q5TF58 517 aa18.09■□□□□ 0.49
RPUSD1-204ENST00000563560 SH3RF3Q8TEJ3 882 aaPredicted RBP18.09■□□□□ 0.49
RPUSD1-204ENST00000563560 ZKSCAN4Q969J2 545 aaPredicted RBP18.09■□□□□ 0.49
RPUSD1-204ENST00000563560 OPTNQ96CV9 577 aa18.09■□□□□ 0.49
RPUSD1-204ENST00000563560 BEGAINQ9BUH8 593 aa18.09■□□□□ 0.49
RPUSD1-204ENST00000563560 R3HDMLQ9H3Y0 253 aa18.09■□□□□ 0.49
RPUSD1-204ENST00000563560 NAV1Q8NEY1 1877 aa18.08■□□□□ 0.49
RPUSD1-204ENST00000563560 SMARCA5O60264 1052 aaPredicted RBP18.08■□□□□ 0.48
RPUSD1-204ENST00000563560 INPP5BP32019 993 aa18.08■□□□□ 0.48
RPUSD1-204ENST00000563560 NOL9Q5SY16 702 aaKnown RBP18.08■□□□□ 0.48
RPUSD1-204ENST00000563560 NAA16Q6N069 864 aaPredicted RBP18.08■□□□□ 0.48
RPUSD1-204ENST00000563560 HOOK2Q96ED9 719 aa18.08■□□□□ 0.48
RPUSD1-204ENST00000563560 WRNIP1Q96S55 665 aa18.08■□□□□ 0.48
RPUSD1-204ENST00000563560 ZNF341Q9BYN7 854 aa18.08■□□□□ 0.48
RPUSD1-204ENST00000563560 TCRBV5S4A2TA0A5A2 114 aa18.07■□□□□ 0.48
RPUSD1-204ENST00000563560 MANSC4A6NHS7 340 aaPredicted RBP18.07■□□□□ 0.48
RPUSD1-204ENST00000563560 ATP5JP18859 108 aa18.07■□□□□ 0.48
RPUSD1-204ENST00000563560 SREBF2Q12772 1141 aa18.07■□□□□ 0.48
RPUSD1-204ENST00000563560 NOM1Q5C9Z4 860 aaKnown RBP18.07■□□□□ 0.48
RPUSD1-204ENST00000563560 DCAF15Q66K64 600 aa18.07■□□□□ 0.48
RPUSD1-204ENST00000563560 IFNL1Q8IU54 200 aa18.07■□□□□ 0.48
RPUSD1-204ENST00000563560 LRRCC1Q9C099 1032 aa18.07■□□□□ 0.48
RPUSD1-204ENST00000563560 OSBPL5Q9H0X9 879 aaPredicted RBP18.07■□□□□ 0.48
RPUSD1-204ENST00000563560 AATFQ9NY61 560 aaKnown RBP eCLIP18.07■□□□□ 0.48
RPUSD1-204ENST00000563560 TBC1D12O60347 775 aa18.06■□□□□ 0.48
RPUSD1-204ENST00000563560 INHBEP58166 350 aa18.06■□□□□ 0.48
RPUSD1-204ENST00000563560 DYNLL1P63167 89 aaKnown RBP18.06■□□□□ 0.48
RPUSD1-204ENST00000563560 TMED8Q6PL24 325 aaPredicted RBP18.06■□□□□ 0.48
RPUSD1-204ENST00000563560 METTL16Q86W50 562 aaKnown RBP18.06■□□□□ 0.48
RPUSD1-204ENST00000563560 BRI3BPQ8WY22 251 aa18.06■□□□□ 0.48
RPUSD1-204ENST00000563560 EDC3Q96F86 508 aaKnown RBP18.06■□□□□ 0.48
RPUSD1-204ENST00000563560 RIOK1Q9BRS2 568 aaKnown RBP18.06■□□□□ 0.48
RPUSD1-204ENST00000563560 CENPFP49454 3210 aa18.06■□□□□ 0.48
RPUSD1-204ENST00000563560 SALL3Q9BXA9 1300 aa18.05■□□□□ 0.48
RPUSD1-204ENST00000563560 IFIT2P09913 472 aaKnown RBP18.05■□□□□ 0.48
RPUSD1-204ENST00000563560 PICALMQ13492 652 aa18.05■□□□□ 0.48
RPUSD1-204ENST00000563560 MOGSQ13724 837 aa18.05■□□□□ 0.48
RPUSD1-204ENST00000563560 ERO1BQ86YB8 467 aa18.05■□□□□ 0.48
RPUSD1-204ENST00000563560 TNS4Q8IZW8 715 aa18.05■□□□□ 0.48
RPUSD1-204ENST00000563560 LOC285556D6RIA3 1793 aa18.04■□□□□ 0.48
RPUSD1-204ENST00000563560 FLT1P17948 1338 aa18.04■□□□□ 0.48
RPUSD1-204ENST00000563560 PPIL2Q13356 520 aa18.04■□□□□ 0.48
RPUSD1-204ENST00000563560 RRP1BQ14684 758 aaKnown RBP18.04■□□□□ 0.48
RPUSD1-204ENST00000563560 TEX11Q8IYF3 940 aa18.04■□□□□ 0.48
RPUSD1-204ENST00000563560 HAUS7Q99871 368 aa18.04■□□□□ 0.48
RPUSD1-204ENST00000563560 DNAJC18Q9H819 358 aa18.04■□□□□ 0.48
RPUSD1-204ENST00000563560 KCNH4Q9UQ05 1017 aa18.04■□□□□ 0.48
RPUSD1-204ENST00000563560 CSADQ9Y600 493 aa18.04■□□□□ 0.48
RPUSD1-204ENST00000563560 IRF6O14896 467 aa18.03■□□□□ 0.48
RPUSD1-204ENST00000563560 IDH1O75874 414 aaKnown RBP18.03■□□□□ 0.48
RPUSD1-204ENST00000563560 TBC1D8O95759 1140 aa18.03■□□□□ 0.48
RPUSD1-204ENST00000563560 CYP7A1P22680 504 aa18.03■□□□□ 0.48
RPUSD1-204ENST00000563560 PPATQ06203 517 aa18.03■□□□□ 0.48
RPUSD1-204ENST00000563560 MAGEB6Q8N7X4 407 aa18.03■□□□□ 0.48
RPUSD1-204ENST00000563560 OTUD5Q96G74 571 aa18.03■□□□□ 0.48
RPUSD1-204ENST00000563560 BAZ2AQ9UIF9 1905 aaKnown RBP18.02■□□□□ 0.48
RPUSD1-204ENST00000563560 CHGBP05060 677 aa18.02■□□□□ 0.48
RPUSD1-204ENST00000563560 PDE6AP16499 860 aa18.02■□□□□ 0.48
RPUSD1-204ENST00000563560 TTF1Q15361 905 aaPredicted RBP18.02■□□□□ 0.48
RPUSD1-204ENST00000563560 ZSWIM8A7E2V4 1837 aa18.02■□□□□ 0.47
RPUSD1-204ENST00000563560 GOLIM4O00461 696 aa18.01■□□□□ 0.47
RPUSD1-204ENST00000563560 BAG3O95817 575 aa18.01■□□□□ 0.47
RPUSD1-204ENST00000563560 PLCG2P16885 1265 aa18.01■□□□□ 0.47
RPUSD1-204ENST00000563560 CAP1Q01518 475 aa18.01■□□□□ 0.47
RPUSD1-204ENST00000563560 MAP3K12Q12852 859 aa18.01■□□□□ 0.47
RPUSD1-204ENST00000563560 HDAC1Q13547 482 aaPredicted RBP18.01■□□□□ 0.47
RPUSD1-204ENST00000563560 MIGA1Q8NAN2 632 aa18.01■□□□□ 0.47
RPUSD1-204ENST00000563560 TGFBRAP1Q8WUH2 860 aa18.01■□□□□ 0.47
RPUSD1-204ENST00000563560 BOLA2Q9H3K6 86 aa18.01■□□□□ 0.47
RPUSD1-204ENST00000563560 PAG1Q9NWQ8 432 aa18.01■□□□□ 0.47
RPUSD1-204ENST00000563560 BRCA2P51587 3418 aa18.01■□□□□ 0.47
RPUSD1-204ENST00000563560 FAM196BA6NMK8 535 aa18■□□□□ 0.47
RPUSD1-204ENST00000563560 GPR25O00155 361 aa18■□□□□ 0.47
RPUSD1-204ENST00000563560 ALDH1A1P00352 501 aa18■□□□□ 0.47
RPUSD1-204ENST00000563560 GTF2A2P52657 109 aa18■□□□□ 0.47
RPUSD1-204ENST00000563560 SLFNL1Q499Z3 407 aa18■□□□□ 0.47
RPUSD1-204ENST00000563560 MAPKAPK5Q8IW41 473 aa18■□□□□ 0.47
RPUSD1-204ENST00000563560 SCYL3Q8IZE3 742 aa18■□□□□ 0.47
RPUSD1-204ENST00000563560 FAM43AQ8N2R8 423 aa18■□□□□ 0.47
RPUSD1-204ENST00000563560 ZNF296Q8WUU4 475 aaPredicted RBP18■□□□□ 0.47
RPUSD1-204ENST00000563560 DNAJC2Q99543 621 aaKnown RBP18■□□□□ 0.47
RPUSD1-204ENST00000563560 ZNF532Q9HCE3 1301 aa17.99■□□□□ 0.47
RPUSD1-204ENST00000563560 CCL15-CCL14A0A0B4J2E2 113 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms