RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 NEUROD6Q96NK8 337 aa25.92■■□□□ 1.74
CHD9-208ENST00000563410 HMG20BQ9P0W2 317 aa25.92■■□□□ 1.74
CHD9-208ENST00000563410 MROH7-TTC4A0A0A0MT08 1334 aa25.91■■□□□ 1.74
CHD9-208ENST00000563410 ADGRA2Q96PE1 1338 aa25.91■■□□□ 1.74
CHD9-208ENST00000563410 DDTLA6NHG4 134 aaPredicted RBP25.91■■□□□ 1.74
CHD9-208ENST00000563410 PDHXO00330 501 aa25.91■■□□□ 1.74
CHD9-208ENST00000563410 MAP3K10Q02779 954 aa25.91■■□□□ 1.74
CHD9-208ENST00000563410 MECOMQ03112 1051 aa25.91■■□□□ 1.74
CHD9-208ENST00000563410 MGAMO43451 1857 aa25.9■■□□□ 1.74
CHD9-208ENST00000563410 SLURP2P0DP57 97 aa25.9■■□□□ 1.74
CHD9-208ENST00000563410 EN2P19622 333 aaPredicted RBP25.9■■□□□ 1.74
CHD9-208ENST00000563410 CTGFP29279 349 aa25.9■■□□□ 1.74
CHD9-208ENST00000563410 KIF22Q14807 665 aa25.9■■□□□ 1.74
CHD9-208ENST00000563410 SLC9C1Q4G0N8 1177 aa25.9■■□□□ 1.74
CHD9-208ENST00000563410 PI16Q6UXB8 463 aa25.9■■□□□ 1.74
CHD9-208ENST00000563410 ERICH6Q7L0X2 663 aa25.9■■□□□ 1.74
CHD9-208ENST00000563410 CPA4Q9UI42 421 aa25.9■■□□□ 1.74
CHD9-208ENST00000563410 GPR75-ASB3A0A0A6YYF3 556 aa25.89■■□□□ 1.74
CHD9-208ENST00000563410 ARID4AP29374 1257 aaPredicted RBP25.89■■□□□ 1.74
CHD9-208ENST00000563410 RHBDL3P58872 404 aa25.89■■□□□ 1.74
CHD9-208ENST00000563410 SCYL3Q8IZE3 742 aa25.89■■□□□ 1.74
CHD9-208ENST00000563410 CXCL11O14625 94 aa25.88■■□□□ 1.73
CHD9-208ENST00000563410 PICALMQ13492 652 aa25.88■■□□□ 1.73
CHD9-208ENST00000563410 GPAT2Q6NUI2 795 aa25.88■■□□□ 1.73
CHD9-208ENST00000563410 NBPF11Q86T75 865 aa25.88■■□□□ 1.73
CHD9-208ENST00000563410 ZSCAN29Q8IWY8 852 aaPredicted RBP25.88■■□□□ 1.73
CHD9-208ENST00000563410 TMEM57Q8N5G2 664 aa25.88■■□□□ 1.73
CHD9-208ENST00000563410 SPATA5Q8NB90 893 aa25.88■■□□□ 1.73
CHD9-208ENST00000563410 MYO5AQ9Y4I1 1855 aaKnown RBP25.87■■□□□ 1.73
CHD9-208ENST00000563410 GNRH1P01148 92 aa25.87■■□□□ 1.73
CHD9-208ENST00000563410 PTPRAP18433 802 aa25.87■■□□□ 1.73
CHD9-208ENST00000563410 G3BP1Q13283 466 aaKnown RBP eCLIP25.87■■□□□ 1.73
CHD9-208ENST00000563410 TBC1D9Q6ZT07 1266 aa25.87■■□□□ 1.73
CHD9-208ENST00000563410 NSUN4Q96CB9 384 aaKnown RBP25.87■■□□□ 1.73
CHD9-208ENST00000563410 ZKSCAN2Q63HK3 967 aa25.86■■□□□ 1.73
CHD9-208ENST00000563410 SH3TC2Q8TF17 1288 aa25.86■■□□□ 1.73
CHD9-208ENST00000563410 TMEM106CQ9BVX2 250 aa25.86■■□□□ 1.73
CHD9-208ENST00000563410 ZHX2Q9Y6X8 837 aa25.86■■□□□ 1.73
CHD9-208ENST00000563410 ATAD5Q96QE3 1844 aa25.86■■□□□ 1.73
CHD9-208ENST00000563410 ECM2O94769 699 aaPredicted RBP25.85■■□□□ 1.73
CHD9-208ENST00000563410 MCAMP43121 646 aa25.85■■□□□ 1.73
CHD9-208ENST00000563410 POLA2Q14181 598 aa25.85■■□□□ 1.73
CHD9-208ENST00000563410 GORABQ5T7V8 394 aa25.85■■□□□ 1.73
CHD9-208ENST00000563410 TRIM47Q96LD4 638 aa25.85■■□□□ 1.73
CHD9-208ENST00000563410 AFG3L2Q9Y4W6 797 aa25.85■■□□□ 1.73
CHD9-208ENST00000563410 CDK5RAP2Q96SN8 1893 aa25.85■■□□□ 1.73
CHD9-208ENST00000563410 A0A0G2JLL6 359 aaPredicted RBP25.84■■□□□ 1.73
CHD9-208ENST00000563410 NPM3O75607 178 aaKnown RBP25.84■■□□□ 1.73
CHD9-208ENST00000563410 PSMC4P43686 418 aa25.84■■□□□ 1.73
CHD9-208ENST00000563410 PRMT2P55345 433 aa25.84■■□□□ 1.73
CHD9-208ENST00000563410 PRRT2Q7Z6L0 340 aaPredicted RBP25.84■■□□□ 1.73
CHD9-208ENST00000563410 PICK1Q9NRD5 415 aa25.84■■□□□ 1.73
CHD9-208ENST00000563410 CTNND1O60716 968 aaKnown RBP25.83■■□□□ 1.73
CHD9-208ENST00000563410 CYP2C8P10632 490 aa25.83■■□□□ 1.73
CHD9-208ENST00000563410 MAST2Q6P0Q8 1798 aa25.82■■□□□ 1.72
CHD9-208ENST00000563410 LDHCP07864 332 aa25.82■■□□□ 1.72
CHD9-208ENST00000563410 BCRP11274 1271 aa25.82■■□□□ 1.72
CHD9-208ENST00000563410 GSTO1P78417 241 aa25.82■■□□□ 1.72
CHD9-208ENST00000563410 PARK7Q99497 189 aaKnown RBP25.82■■□□□ 1.72
CHD9-208ENST00000563410 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.82■■□□□ 1.72
CHD9-208ENST00000563410 SRRDQ9UH36 339 aa25.82■■□□□ 1.72
CHD9-208ENST00000563410 SIPA1L1O43166 1804 aa25.81■■□□□ 1.72
CHD9-208ENST00000563410 COL2A1P02458 1487 aaPredicted RBP25.81■■□□□ 1.72
CHD9-208ENST00000563410 TBC1D12O60347 775 aa25.81■■□□□ 1.72
CHD9-208ENST00000563410 MAP4K4O95819 1239 aaPredicted RBP25.81■■□□□ 1.72
CHD9-208ENST00000563410 MYCP01106 439 aaPredicted RBP25.81■■□□□ 1.72
CHD9-208ENST00000563410 OSBPP22059 807 aa25.81■■□□□ 1.72
CHD9-208ENST00000563410 ATP8B2P98198 1209 aa25.81■■□□□ 1.72
CHD9-208ENST00000563410 FASTKD5Q7L8L6 764 aaKnown RBP25.81■■□□□ 1.72
CHD9-208ENST00000563410 SSH3Q8TE77 659 aa25.81■■□□□ 1.72
CHD9-208ENST00000563410 GPR108Q9NPR9 543 aa25.81■■□□□ 1.72
CHD9-208ENST00000563410 RAI14Q9P0K7 980 aa25.81■■□□□ 1.72
CHD9-208ENST00000563410 DOCK3Q8IZD9 2030 aa25.81■■□□□ 1.72
CHD9-208ENST00000563410 FOCADQ5VW36 1801 aa25.81■■□□□ 1.72
CHD9-208ENST00000563410 UQCRFS1P1P0C7P4 283 aa25.8■■□□□ 1.72
CHD9-208ENST00000563410 SLC4A8Q2Y0W8 1093 aa25.8■■□□□ 1.72
CHD9-208ENST00000563410 FAM196BA6NMK8 535 aa25.79■■□□□ 1.72
CHD9-208ENST00000563410 FMNL1O95466 1100 aaPredicted RBP25.79■■□□□ 1.72
CHD9-208ENST00000563410 TNNI3KQ59H18 835 aa25.79■■□□□ 1.72
CHD9-208ENST00000563410 GADL1Q6ZQY3 521 aa25.79■■□□□ 1.72
CHD9-208ENST00000563410 CCDC84Q86UT8 332 aaPredicted RBP25.79■■□□□ 1.72
CHD9-208ENST00000563410 OSBPL5Q9H0X9 879 aaPredicted RBP25.79■■□□□ 1.72
CHD9-208ENST00000563410 FPGT-TNNI3KV9GXZ4 949 aa25.79■■□□□ 1.72
CHD9-208ENST00000563410 CEP290O15078 2479 aa25.79■■□□□ 1.72
CHD9-208ENST00000563410 HNRNPUQ00839 825 aaKnown RBP eCLIP25.78■■□□□ 1.72
CHD9-208ENST00000563410 DBNDD2Q9BQY9 259 aa25.78■■□□□ 1.72
CHD9-208ENST00000563410 C1orf115Q9H7X2 142 aa25.78■■□□□ 1.72
CHD9-208ENST00000563410 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.78■■□□□ 1.723e-7■■■■■ 34.2
CHD9-208ENST00000563410 SNRKQ9NRH2 765 aa25.78■■□□□ 1.72
CHD9-208ENST00000563410 LRP2BPQ9P2M1 347 aa25.78■■□□□ 1.72
CHD9-208ENST00000563410 SLC45A1Q9Y2W3 748 aa25.78■■□□□ 1.72
CHD9-208ENST00000563410 LOC285556D6RIA3 1793 aa25.77■■□□□ 1.72
CHD9-208ENST00000563410 HOXD10P28358 340 aa25.77■■□□□ 1.72
CHD9-208ENST00000563410 TRIM75PA6NK02 468 aa25.76■■□□□ 1.71
CHD9-208ENST00000563410 RLBP1P12271 317 aa25.76■■□□□ 1.71
CHD9-208ENST00000563410 MTFR1Q15390 333 aa25.76■■□□□ 1.71
CHD9-208ENST00000563410 TEX11Q8IYF3 940 aa25.76■■□□□ 1.71
CHD9-208ENST00000563410 MIER1Q8N108 512 aa25.76■■□□□ 1.71
CHD9-208ENST00000563410 SH3RF3Q8TEJ3 882 aaPredicted RBP25.76■■□□□ 1.71
CHD9-208ENST00000563410 MYPNQ86TC9 1320 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms