RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 MROH7-TTC4A0A0A0MT08 1334 aa23.29■■□□□ 1.32
CDC42BPB-206ENST00000559790 CEP290O15078 2479 aa23.28■■□□□ 1.32
CDC42BPB-206ENST00000559790 DDX60LQ5H9U9 1706 aaKnown RBP23.28■■□□□ 1.32
CDC42BPB-206ENST00000559790 DDTLA6NHG4 134 aaPredicted RBP23.28■■□□□ 1.32
CDC42BPB-206ENST00000559790 ARID4AP29374 1257 aaPredicted RBP23.28■■□□□ 1.32
CDC42BPB-206ENST00000559790 MECOMQ03112 1051 aa23.28■■□□□ 1.32
CDC42BPB-206ENST00000559790 MYH1P12882 1939 aa23.27■■□□□ 1.32
CDC42BPB-206ENST00000559790 ENTPD3O75355 529 aa23.27■■□□□ 1.32
CDC42BPB-206ENST00000559790 GNAI2P04899 355 aa23.27■■□□□ 1.32
CDC42BPB-206ENST00000559790 BTDP43251 543 aa23.27■■□□□ 1.32
CDC42BPB-206ENST00000559790 POLA2Q14181 598 aa23.27■■□□□ 1.32
CDC42BPB-206ENST00000559790 FRAT1Q92837 279 aaPredicted RBP23.27■■□□□ 1.32
CDC42BPB-206ENST00000559790 ZNF333Q96JL9 665 aa23.27■■□□□ 1.32
CDC42BPB-206ENST00000559790 ABCF2Q9UG63 623 aa23.27■■□□□ 1.32
CDC42BPB-206ENST00000559790 RLBP1P12271 317 aa23.26■■□□□ 1.31
CDC42BPB-206ENST00000559790 MCAMP43121 646 aa23.26■■□□□ 1.31
CDC42BPB-206ENST00000559790 LACTBP83111 547 aaPredicted RBP23.26■■□□□ 1.31
CDC42BPB-206ENST00000559790 MVPQ14764 893 aaKnown RBP23.26■■□□□ 1.31
CDC42BPB-206ENST00000559790 PRPF38BQ5VTL8 546 aaKnown RBP23.26■■□□□ 1.31
CDC42BPB-206ENST00000559790 GPAT2Q6NUI2 795 aa23.26■■□□□ 1.31
CDC42BPB-206ENST00000559790 C17orf99Q6UX52 265 aa23.26■■□□□ 1.31
CDC42BPB-206ENST00000559790 ANKRD23Q86SG2 305 aa23.26■■□□□ 1.31
CDC42BPB-206ENST00000559790 ZGPATQ8N5A5 531 aaKnown RBP23.26■■□□□ 1.31
CDC42BPB-206ENST00000559790 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.26■■□□□ 1.31
CDC42BPB-206ENST00000559790 GPR75-ASB3A0A0A6YYF3 556 aa23.25■■□□□ 1.31
CDC42BPB-206ENST00000559790 TBC1D9Q6ZT07 1266 aa23.25■■□□□ 1.31
CDC42BPB-206ENST00000559790 DZIP1Q86YF9 867 aaKnown RBP23.25■■□□□ 1.31
CDC42BPB-206ENST00000559790 AKAP2Q9Y2D5 859 aa23.25■■□□□ 1.31
CDC42BPB-206ENST00000559790 PLXNB2O15031 1838 aa23.24■■□□□ 1.31
CDC42BPB-206ENST00000559790 IPO8O15397 1037 aaKnown RBP23.24■■□□□ 1.31
CDC42BPB-206ENST00000559790 MIER1Q8N108 512 aa23.24■■□□□ 1.31
CDC42BPB-206ENST00000559790 NSUN4Q96CB9 384 aaKnown RBP23.24■■□□□ 1.31
CDC42BPB-206ENST00000559790 SPATA5Q8NB90 893 aa23.23■■□□□ 1.31
CDC42BPB-206ENST00000559790 SSH3Q8TE77 659 aa23.23■■□□□ 1.31
CDC42BPB-206ENST00000559790 PDHXO00330 501 aa23.22■■□□□ 1.31
CDC42BPB-206ENST00000559790 ZKSCAN2Q63HK3 967 aa23.22■■□□□ 1.31
CDC42BPB-206ENST00000559790 SCYL3Q8IZE3 742 aa23.22■■□□□ 1.31
CDC42BPB-206ENST00000559790 CPA4Q9UI42 421 aa23.22■■□□□ 1.31
CDC42BPB-206ENST00000559790 PTPRAP18433 802 aa23.21■■□□□ 1.31
CDC42BPB-206ENST00000559790 EN2P19622 333 aaPredicted RBP23.21■■□□□ 1.31
CDC42BPB-206ENST00000559790 CCDC84Q86UT8 332 aaPredicted RBP23.21■■□□□ 1.31
CDC42BPB-206ENST00000559790 TRIM47Q96LD4 638 aa23.21■■□□□ 1.31
CDC42BPB-206ENST00000559790 NEUROD6Q96NK8 337 aa23.21■■□□□ 1.31
CDC42BPB-206ENST00000559790 C1orf115Q9H7X2 142 aa23.21■■□□□ 1.31
CDC42BPB-206ENST00000559790 A0A0G2JLL6 359 aaPredicted RBP23.2■■□□□ 1.3
CDC42BPB-206ENST00000559790 FAM196BA6NMK8 535 aa23.2■■□□□ 1.3
CDC42BPB-206ENST00000559790 NPM3O75607 178 aaKnown RBP23.2■■□□□ 1.3
CDC42BPB-206ENST00000559790 BCRP11274 1271 aa23.2■■□□□ 1.3
CDC42BPB-206ENST00000559790 PICALMQ13492 652 aa23.2■■□□□ 1.3
CDC42BPB-206ENST00000559790 RRP1BQ14684 758 aaKnown RBP23.2■■□□□ 1.3
CDC42BPB-206ENST00000559790 ERICH6Q7L0X2 663 aa23.2■■□□□ 1.3
CDC42BPB-206ENST00000559790 PRRT2Q7Z6L0 340 aaPredicted RBP23.2■■□□□ 1.3
CDC42BPB-206ENST00000559790 AFG3L2Q9Y4W6 797 aa23.2■■□□□ 1.3
CDC42BPB-206ENST00000559790 ALPK3Q96L96 1907 aa23.2■■□□□ 1.3
CDC42BPB-206ENST00000559790 HNRNPUQ00839 825 aaKnown RBP eCLIP23.19■■□□□ 1.3
CDC42BPB-206ENST00000559790 SPTY2D1Q68D10 685 aaPredicted RBP23.19■■□□□ 1.3
CDC42BPB-206ENST00000559790 DBNDD2Q9BQY9 259 aa23.19■■□□□ 1.3
CDC42BPB-206ENST00000559790 NAV1Q8NEY1 1877 aa23.18■■□□□ 1.3
CDC42BPB-206ENST00000559790 CXCL11O14625 94 aa23.18■■□□□ 1.3
CDC42BPB-206ENST00000559790 TNNI3KQ59H18 835 aa23.18■■□□□ 1.3
CDC42BPB-206ENST00000559790 ADGRA1Q86SQ6 560 aa23.18■■□□□ 1.3
CDC42BPB-206ENST00000559790 SH3TC2Q8TF17 1288 aa23.18■■□□□ 1.3
CDC42BPB-206ENST00000559790 GPR108Q9NPR9 543 aa23.18■■□□□ 1.3
CDC42BPB-206ENST00000559790 FPGT-TNNI3KV9GXZ4 949 aa23.18■■□□□ 1.3
CDC42BPB-206ENST00000559790 CYP2C8P10632 490 aa23.17■■□□□ 1.3
CDC42BPB-206ENST00000559790 ATP8B2P98198 1209 aa23.17■■□□□ 1.3
CDC42BPB-206ENST00000559790 SLC9C1Q4G0N8 1177 aa23.17■■□□□ 1.3
CDC42BPB-206ENST00000559790 TLR7Q9NYK1 1049 aaKnown RBP23.17■■□□□ 1.3
CDC42BPB-206ENST00000559790 ZHX2Q9Y6X8 837 aa23.17■■□□□ 1.3
CDC42BPB-206ENST00000559790 ZBTB7BO15156 539 aaPredicted RBP23.16■■□□□ 1.3
CDC42BPB-206ENST00000559790 ECM2O94769 699 aaPredicted RBP23.16■■□□□ 1.3
CDC42BPB-206ENST00000559790 G3BP1Q13283 466 aaKnown RBP eCLIP23.16■■□□□ 1.3
CDC42BPB-206ENST00000559790 SLF2Q8IX21 1173 aa23.16■■□□□ 1.3
CDC42BPB-206ENST00000559790 OSBPL5Q9H0X9 879 aaPredicted RBP23.16■■□□□ 1.3
CDC42BPB-206ENST00000559790 MYH7P12883 1935 aa23.16■■□□□ 1.3
CDC42BPB-206ENST00000559790 TBC1D12O60347 775 aa23.15■■□□□ 1.3
CDC42BPB-206ENST00000559790 OSBPP22059 807 aa23.15■■□□□ 1.3
CDC42BPB-206ENST00000559790 ZSCAN29Q8IWY8 852 aaPredicted RBP23.15■■□□□ 1.3
CDC42BPB-206ENST00000559790 SHISA4Q96DD7 197 aa23.15■■□□□ 1.3
CDC42BPB-206ENST00000559790 SNRKQ9NRH2 765 aa23.15■■□□□ 1.3
CDC42BPB-206ENST00000559790 DBNLQ9UJU6 430 aaKnown RBP23.15■■□□□ 1.3
CDC42BPB-206ENST00000559790 NOP58Q9Y2X3 529 aaKnown RBP23.15■■□□□ 1.3
CDC42BPB-206ENST00000559790 CTNND1O60716 968 aaKnown RBP23.14■■□□□ 1.29
CDC42BPB-206ENST00000559790 CYP2E1P05181 493 aaPredicted RBP23.14■■□□□ 1.29
CDC42BPB-206ENST00000559790 SH3RF3Q8TEJ3 882 aaPredicted RBP23.14■■□□□ 1.29
CDC42BPB-206ENST00000559790 DNAJC18Q9H819 358 aa23.14■■□□□ 1.29
CDC42BPB-206ENST00000559790 SRRDQ9UH36 339 aa23.14■■□□□ 1.29
CDC42BPB-206ENST00000559790 GNRH1P01148 92 aa23.13■■□□□ 1.29
CDC42BPB-206ENST00000559790 UQCRFS1P1P0C7P4 283 aa23.13■■□□□ 1.29
CDC42BPB-206ENST00000559790 PSMC4P43686 418 aa23.13■■□□□ 1.29
CDC42BPB-206ENST00000559790 PARK7Q99497 189 aaKnown RBP23.13■■□□□ 1.29
CDC42BPB-206ENST00000559790 RAI14Q9P0K7 980 aa23.13■■□□□ 1.29
CDC42BPB-206ENST00000559790 ZBED9Q6R2W3 1325 aa23.12■■□□□ 1.29
CDC42BPB-206ENST00000559790 JAG1P78504 1218 aa23.12■■□□□ 1.29
CDC42BPB-206ENST00000559790 MTFR1Q15390 333 aa23.12■■□□□ 1.29
CDC42BPB-206ENST00000559790 GORABQ5T7V8 394 aa23.12■■□□□ 1.29
CDC42BPB-206ENST00000559790 ZNF512BQ96KM6 892 aaPredicted RBP23.12■■□□□ 1.29
CDC42BPB-206ENST00000559790 PIH1D3Q9NQM4 214 aaKnown RBP23.12■■□□□ 1.29
CDC42BPB-206ENST00000559790 PICK1Q9NRD5 415 aa23.12■■□□□ 1.29
CDC42BPB-206ENST00000559790 MYH8P13535 1937 aa23.12■■□□□ 1.29
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