RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 MYH2Q9UKX2 1941 aa12.87□□□□□ -0.35
SPG11-217ENST00000559511 RANBP6O60518 1105 aaKnown RBP12.87□□□□□ -0.35
SPG11-217ENST00000559511 CYP7A1P22680 504 aa12.87□□□□□ -0.35
SPG11-217ENST00000559511 LIFRP42702 1097 aa12.87□□□□□ -0.35
SPG11-217ENST00000559511 FAM160A1Q05DH4 1040 aa12.87□□□□□ -0.35
SPG11-217ENST00000559511 CCDC73Q6ZRK6 1079 aa12.87□□□□□ -0.35
SPG11-217ENST00000559511 MFSD6Q6ZSS7 791 aa12.87□□□□□ -0.35
SPG11-217ENST00000559511 BRAPQ7Z569 592 aa12.87□□□□□ -0.35
SPG11-217ENST00000559511 STAG1Q8WVM7 1258 aa12.87□□□□□ -0.35
SPG11-217ENST00000559511 FAM84BQ96KN1 310 aaPredicted RBP12.87□□□□□ -0.35
SPG11-217ENST00000559511 ALG1Q9BT22 464 aa12.87□□□□□ -0.35
SPG11-217ENST00000559511 CNNM2Q9H8M5 875 aa12.87□□□□□ -0.35
SPG11-217ENST00000559511 POLR3EQ9NVU0 708 aa12.87□□□□□ -0.35
SPG11-217ENST00000559511 ABCF2Q9UG63 623 aa12.87□□□□□ -0.35
SPG11-217ENST00000559511 UBE2Q2LH0YL09 131 aa12.86□□□□□ -0.35
SPG11-217ENST00000559511 IFIT3O14879 490 aaKnown RBP12.86□□□□□ -0.35
SPG11-217ENST00000559511 RRP12Q5JTH9 1297 aaKnown RBP12.86□□□□□ -0.35
SPG11-217ENST00000559511 ADALQ6DHV7 355 aa12.86□□□□□ -0.35
SPG11-217ENST00000559511 STK11IPQ8N1F8 1099 aa12.86□□□□□ -0.35
SPG11-217ENST00000559511 NACAP1Q9BZK3 213 aa12.86□□□□□ -0.35
SPG11-217ENST00000559511 KRT23Q9C075 422 aa12.86□□□□□ -0.35
SPG11-217ENST00000559511 TTC12Q9H892 705 aaPredicted RBP12.86□□□□□ -0.35
SPG11-217ENST00000559511 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.86□□□□□ -0.35
SPG11-217ENST00000559511 GOLGA8AA7E2F4 631 aa12.86□□□□□ -0.35
SPG11-217ENST00000559511 NPHP1O15259 732 aa12.86□□□□□ -0.35
SPG11-217ENST00000559511 CDKL5O76039 1030 aa12.86□□□□□ -0.35
SPG11-217ENST00000559511 GYS1P13807 737 aa12.86□□□□□ -0.35
SPG11-217ENST00000559511 KLRK1P26718 216 aa12.86□□□□□ -0.35
SPG11-217ENST00000559511 ZNF165P49910 485 aa12.86□□□□□ -0.35
SPG11-217ENST00000559511 STK38Q15208 465 aa12.86□□□□□ -0.35
SPG11-217ENST00000559511 CAVIN4Q5BKX8 364 aa12.86□□□□□ -0.35
SPG11-217ENST00000559511 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.86□□□□□ -0.35
SPG11-217ENST00000559511 SDR42E1Q8WUS8 393 aa12.86□□□□□ -0.35
SPG11-217ENST00000559511 ZKSCAN3Q9BRR0 538 aa12.86□□□□□ -0.35
SPG11-217ENST00000559511 GNL3LQ9NVN8 582 aaKnown RBP12.86□□□□□ -0.35
SPG11-217ENST00000559511 RAI14Q9P0K7 980 aa12.86□□□□□ -0.35
SPG11-217ENST00000559511 SLC12A7Q9Y666 1083 aa12.86□□□□□ -0.35
SPG11-217ENST00000559511 MYH6P13533 1939 aa12.86□□□□□ -0.35
SPG11-217ENST00000559511 SMIM22K7EJ46 135 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 CTAGE5O15320 804 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 KINO60870 393 aaKnown RBP12.85□□□□□ -0.35
SPG11-217ENST00000559511 YEATS4O95619 227 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 KRT40Q6A162 431 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 FBXO33Q7Z6M2 555 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 FMR1NBQ8N0W7 255 aaPredicted RBP12.85□□□□□ -0.35
SPG11-217ENST00000559511 CNBD1Q8NA66 436 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 MRPS27Q92552 414 aaKnown RBP12.85□□□□□ -0.35
SPG11-217ENST00000559511 ANKRD2Q9GZV1 360 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 TAOK2Q9UL54 1235 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 MAGEB6P1A0A0J9YX57 407 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 A0A1B0GVL5 298 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 A0A1W2PQ27 194 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 A0A1W2PQ64 194 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 A0A1W2PQD8 194 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 CCDC69A6NI79 296 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 SPTLC2O15270 562 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 KIAA2012Q0VF49 1180 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 ANO1Q5XXA6 986 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 C11orf57Q6ZUT1 292 aaPredicted RBP12.85□□□□□ -0.35
SPG11-217ENST00000559511 VPS37DQ86XT2 251 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 PROM2Q8N271 834 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 RGS22Q8NE09 1264 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 TDRD7Q8NHU6 1098 aaKnown RBP12.85□□□□□ -0.35
SPG11-217ENST00000559511 KCNG4Q8TDN1 519 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 RIOK1Q9BRS2 568 aaKnown RBP12.85□□□□□ -0.35
SPG11-217ENST00000559511 TOMM22Q9NS69 142 aa12.85□□□□□ -0.35
SPG11-217ENST00000559511 MAST2Q6P0Q8 1798 aa12.84□□□□□ -0.35
SPG11-217ENST00000559511 NID2Q14112 1375 aa12.84□□□□□ -0.35
SPG11-217ENST00000559511 A0A087WWV3 80 aa12.84□□□□□ -0.35
SPG11-217ENST00000559511 IARSP41252 1262 aaKnown RBP12.84□□□□□ -0.35
SPG11-217ENST00000559511 NDUFA8P51970 172 aa12.84□□□□□ -0.35
SPG11-217ENST00000559511 PPARAQ07869 468 aa12.84□□□□□ -0.35
SPG11-217ENST00000559511 SF3A1Q15459 793 aaKnown RBP12.84□□□□□ -0.35
SPG11-217ENST00000559511 PRR5LQ6MZQ0 368 aa12.84□□□□□ -0.35
SPG11-217ENST00000559511 CPLX2Q6PUV4 134 aaKnown RBP12.84□□□□□ -0.35
SPG11-217ENST00000559511 SPC24Q8NBT2 197 aa12.84□□□□□ -0.35
SPG11-217ENST00000559511 ZNF384Q8TF68 577 aa12.84□□□□□ -0.35
SPG11-217ENST00000559511 ERCC4Q92889 916 aaPredicted RBP12.84□□□□□ -0.35
SPG11-217ENST00000559511 KIAA1551Q9HCM1 1747 aa12.84□□□□□ -0.35
SPG11-217ENST00000559511 SYNE3Q6ZMZ3 975 aa12.83□□□□□ -0.35
SPG11-217ENST00000559511 ANKRD31Q8N7Z5 1873 aa12.83□□□□□ -0.36
SPG11-217ENST00000559511 IRS2Q9Y4H2 1338 aa12.83□□□□□ -0.36
SPG11-217ENST00000559511 MINDY4BA8MYZ0 360 aa12.83□□□□□ -0.36
SPG11-217ENST00000559511 WTAPQ15007 396 aa12.83□□□□□ -0.36
SPG11-217ENST00000559511 IQCB1Q15051 598 aa12.83□□□□□ -0.36
SPG11-217ENST00000559511 STX1AQ16623 288 aa12.83□□□□□ -0.36
SPG11-217ENST00000559511 TXNRD1Q16881 649 aa12.83□□□□□ -0.36
SPG11-217ENST00000559511 AXDND1Q5T1B0 1012 aaPredicted RBP12.83□□□□□ -0.36
SPG11-217ENST00000559511 SLC51AQ86UW1 340 aa12.83□□□□□ -0.36
SPG11-217ENST00000559511 SLC26A6Q9BXS9 759 aa12.83□□□□□ -0.36
SPG11-217ENST00000559511 KCNF1Q9H3M0 494 aa12.83□□□□□ -0.36
SPG11-217ENST00000559511 TFCP2L1Q9NZI6 479 aa12.83□□□□□ -0.36
SPG11-217ENST00000559511 DUOX1Q9NRD9 1551 aa12.83□□□□□ -0.36
SPG11-217ENST00000559511 STK36Q9NRP7 1315 aa12.82□□□□□ -0.36
SPG11-217ENST00000559511 SEMA3EO15041 775 aa12.82□□□□□ -0.36
SPG11-217ENST00000559511 FMNL1O95466 1100 aaPredicted RBP12.82□□□□□ -0.36
SPG11-217ENST00000559511 CAVIN2O95810 425 aa12.82□□□□□ -0.36
SPG11-217ENST00000559511 GUCY1A2P33402 732 aa12.82□□□□□ -0.36
SPG11-217ENST00000559511 DYNLL1P63167 89 aaKnown RBP12.82□□□□□ -0.36
SPG11-217ENST00000559511 RBM6P78332 1123 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms