RNA–Protein interactions for RNA: ENST00000558791.5

CTDSPL2-203, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-203ENST00000558791 MRPL50Q8N5N7 158 aaKnown RBP13.15□□□□□ -0.3
CTDSPL2-203ENST00000558791 PXYLP1Q8TE99 480 aa13.15□□□□□ -0.3
CTDSPL2-203ENST00000558791 IDI2Q9BXS1 227 aa13.15□□□□□ -0.3
CTDSPL2-203ENST00000558791 USP40Q9NVE5 1235 aa13.15□□□□□ -0.3
CTDSPL2-203ENST00000558791 DENND2AQ9ULE3 1009 aa13.15□□□□□ -0.3
CTDSPL2-203ENST00000558791 SZT2Q5T011 3432 aa13.14□□□□□ -0.31
CTDSPL2-203ENST00000558791 DOCK3Q8IZD9 2030 aa13.14□□□□□ -0.31
CTDSPL2-203ENST00000558791 A0A0G2JLL6 359 aaPredicted RBP13.14□□□□□ -0.31
CTDSPL2-203ENST00000558791 CIAO1O76071 339 aa13.14□□□□□ -0.31
CTDSPL2-203ENST00000558791 SGPL1O95470 568 aa13.14□□□□□ -0.31
CTDSPL2-203ENST00000558791 RFX5P48382 616 aaPredicted RBP13.14□□□□□ -0.31
CTDSPL2-203ENST00000558791 MAP3K10Q02779 954 aa13.14□□□□□ -0.31
CTDSPL2-203ENST00000558791 IRF5Q13568 498 aa13.14□□□□□ -0.31
CTDSPL2-203ENST00000558791 GPAT2Q6NUI2 795 aa13.14□□□□□ -0.31
CTDSPL2-203ENST00000558791 PRRT2Q7Z6L0 340 aaPredicted RBP13.14□□□□□ -0.31
CTDSPL2-203ENST00000558791 SCYL3Q8IZE3 742 aa13.14□□□□□ -0.31
CTDSPL2-203ENST00000558791 KLHDC4Q8TBB5 520 aa13.14□□□□□ -0.31
CTDSPL2-203ENST00000558791 U2AF1L4Q8WU68 220 aaKnown RBP13.14□□□□□ -0.31
CTDSPL2-203ENST00000558791 PICK1Q9NRD5 415 aa13.14□□□□□ -0.31
CTDSPL2-203ENST00000558791 CEP126Q9P2H0 1117 aa13.14□□□□□ -0.31
CTDSPL2-203ENST00000558791 RBM27Q9P2N5 1060 aaKnown RBP13.14□□□□□ -0.31
CTDSPL2-203ENST00000558791 FAM198AQ9UFP1 575 aa13.14□□□□□ -0.31
CTDSPL2-203ENST00000558791 PHF20L1A8MW92 1017 aa13.13□□□□□ -0.31
CTDSPL2-203ENST00000558791 FARP2O94887 1054 aaPredicted RBP13.13□□□□□ -0.31
CTDSPL2-203ENST00000558791 PRDX5P30044 214 aa13.13□□□□□ -0.31
CTDSPL2-203ENST00000558791 PRKCZQ05513 592 aa13.13□□□□□ -0.31
CTDSPL2-203ENST00000558791 NFIAQ12857 509 aa13.13□□□□□ -0.31
CTDSPL2-203ENST00000558791 ATP2B3Q16720 1220 aa13.13□□□□□ -0.31
CTDSPL2-203ENST00000558791 PRO3102Q9H379 93 aa13.13□□□□□ -0.31
CTDSPL2-203ENST00000558791 PDS5AQ29RF7 1337 aaKnown RBP13.13□□□□□ -0.31
CTDSPL2-203ENST00000558791 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
CTDSPL2-203ENST00000558791 DOCK1Q14185 1865 aa13.12□□□□□ -0.31
CTDSPL2-203ENST00000558791 ATRNL1Q5VV63 1379 aa13.12□□□□□ -0.31
CTDSPL2-203ENST00000558791 PHIPQ8WWQ0 1821 aa13.12□□□□□ -0.31
CTDSPL2-203ENST00000558791 ADCY3O60266 1144 aa13.12□□□□□ -0.31
CTDSPL2-203ENST00000558791 CTNND1O60716 968 aaKnown RBP13.12□□□□□ -0.31
CTDSPL2-203ENST00000558791 PTPRAP18433 802 aa13.12□□□□□ -0.31
CTDSPL2-203ENST00000558791 DIXDC1Q155Q3 683 aa13.12□□□□□ -0.31
CTDSPL2-203ENST00000558791 ALDH1L2Q3SY69 923 aa13.12□□□□□ -0.31
CTDSPL2-203ENST00000558791 ATG9AQ7Z3C6 839 aa13.12□□□□□ -0.31
CTDSPL2-203ENST00000558791 FAM163AQ96GL9 167 aaPredicted RBP13.12□□□□□ -0.31
CTDSPL2-203ENST00000558791 TBC1D2Q9BYX2 928 aa13.12□□□□□ -0.31
CTDSPL2-203ENST00000558791 AFG3L2Q9Y4W6 797 aa13.12□□□□□ -0.31
CTDSPL2-203ENST00000558791 LRRFIP2Q9Y608 721 aaKnown RBP13.12□□□□□ -0.31
CTDSPL2-203ENST00000558791 ZHX2Q9Y6X8 837 aa13.12□□□□□ -0.31
CTDSPL2-203ENST00000558791 GAKO14976 1311 aa13.12□□□□□ -0.31
CTDSPL2-203ENST00000558791 E9PSI1 815 aa13.11□□□□□ -0.31
CTDSPL2-203ENST00000558791 ZBTB7BO15156 539 aaPredicted RBP13.11□□□□□ -0.31
CTDSPL2-203ENST00000558791 MAP4K4O95819 1239 aaPredicted RBP13.11□□□□□ -0.31
CTDSPL2-203ENST00000558791 CYP2C8P10632 490 aa13.11□□□□□ -0.31
CTDSPL2-203ENST00000558791 IL15P40933 162 aaPredicted RBP13.11□□□□□ -0.31
CTDSPL2-203ENST00000558791 SPTY2D1Q68D10 685 aaPredicted RBP13.11□□□□□ -0.31
CTDSPL2-203ENST00000558791 COA7Q96BR5 231 aa13.11□□□□□ -0.31
CTDSPL2-203ENST00000558791 PNMA3Q9UL41 463 aa13.11□□□□□ -0.31
CTDSPL2-203ENST00000558791 TNPO2O14787 897 aaKnown RBP13.1□□□□□ -0.31
CTDSPL2-203ENST00000558791 TBC1D12O60347 775 aa13.1□□□□□ -0.31
CTDSPL2-203ENST00000558791 EVI5O60447 810 aa13.1□□□□□ -0.31
CTDSPL2-203ENST00000558791 FLT3LGP49771 235 aa13.1□□□□□ -0.31
CTDSPL2-203ENST00000558791 RGS3P49796 1198 aa13.1□□□□□ -0.31
CTDSPL2-203ENST00000558791 GADL1Q6ZQY3 521 aa13.1□□□□□ -0.31
CTDSPL2-203ENST00000558791 SMCR8Q8TEV9 937 aaPredicted RBP13.1□□□□□ -0.31
CTDSPL2-203ENST00000558791 UNC93B1Q9H1C4 597 aa13.1□□□□□ -0.31
CTDSPL2-203ENST00000558791 GABRQQ9UN88 632 aa13.1□□□□□ -0.31
CTDSPL2-203ENST00000558791 RFX7Q2KHR2 1363 aa13.09□□□□□ -0.31
CTDSPL2-203ENST00000558791 ECM2O94769 699 aaPredicted RBP13.09□□□□□ -0.31
CTDSPL2-203ENST00000558791 TFRCP02786 760 aaKnown RBP13.09□□□□□ -0.31
CTDSPL2-203ENST00000558791 UBTFL1P0CB47 393 aaPredicted RBP13.09□□□□□ -0.31
CTDSPL2-203ENST00000558791 PABPC4Q13310 644 aaKnown RBP eCLIP13.09□□□□□ -0.31
CTDSPL2-203ENST00000558791 FAM110CQ1W6H9 321 aa13.09□□□□□ -0.31
CTDSPL2-203ENST00000558791 DZIP1Q86YF9 867 aaKnown RBP13.09□□□□□ -0.31
CTDSPL2-203ENST00000558791 ZSCAN29Q8IWY8 852 aaPredicted RBP13.09□□□□□ -0.31
CTDSPL2-203ENST00000558791 FAM9BQ8IZU0 186 aa13.09□□□□□ -0.31
CTDSPL2-203ENST00000558791 ANKLE1Q8NAG6 615 aa13.09□□□□□ -0.31
CTDSPL2-203ENST00000558791 PROCA1Q8NCQ7 364 aaPredicted RBP13.09□□□□□ -0.31
CTDSPL2-203ENST00000558791 SSH1Q8WYL5 1049 aa13.09□□□□□ -0.31
CTDSPL2-203ENST00000558791 CRISPLD2Q9H0B8 497 aa13.09□□□□□ -0.31
CTDSPL2-203ENST00000558791 PAK6Q9NQU5 681 aaPredicted RBP13.09□□□□□ -0.31
CTDSPL2-203ENST00000558791 AGTPBP1Q9UPW5 1226 aa13.09□□□□□ -0.31
CTDSPL2-203ENST00000558791 INHAP05111 366 aa13.08□□□□□ -0.32
CTDSPL2-203ENST00000558791 GCLCP48506 637 aaPredicted RBP13.08□□□□□ -0.32
CTDSPL2-203ENST00000558791 GPR153Q6NV75 609 aa13.08□□□□□ -0.32
CTDSPL2-203ENST00000558791 ZFPM1Q8IX07 1006 aa13.08□□□□□ -0.32
CTDSPL2-203ENST00000558791 OSBPL5Q9H0X9 879 aaPredicted RBP13.08□□□□□ -0.32
CTDSPL2-203ENST00000558791 CT47B1P0C2W7 299 aaPredicted RBP13.07□□□□□ -0.32
CTDSPL2-203ENST00000558791 PHKA1P46020 1223 aa13.07□□□□□ -0.32
CTDSPL2-203ENST00000558791 CCDC102BQ68D86 513 aa13.07□□□□□ -0.32
CTDSPL2-203ENST00000558791 NECAB2Q7Z6G3 386 aa13.07□□□□□ -0.32
CTDSPL2-203ENST00000558791 SIL1Q9H173 461 aa13.07□□□□□ -0.32
CTDSPL2-203ENST00000558791 COPRSQ9NQ92 184 aa13.07□□□□□ -0.32
CTDSPL2-203ENST00000558791 AKAP2Q9Y2D5 859 aa13.07□□□□□ -0.32
CTDSPL2-203ENST00000558791 COL2A1P02458 1487 aaPredicted RBP13.07□□□□□ -0.32
CTDSPL2-203ENST00000558791 DDTLA6NHG4 134 aaPredicted RBP13.06□□□□□ -0.32
CTDSPL2-203ENST00000558791 LDHCP07864 332 aa13.06□□□□□ -0.32
CTDSPL2-203ENST00000558791 ELNP15502 786 aa13.06□□□□□ -0.32
CTDSPL2-203ENST00000558791 BMP8BP34820 402 aa13.06□□□□□ -0.32
CTDSPL2-203ENST00000558791 SH3BP5LQ7L8J4 393 aa13.06□□□□□ -0.32
CTDSPL2-203ENST00000558791 DEFB118Q96PH6 123 aa13.06□□□□□ -0.32
CTDSPL2-203ENST00000558791 ABCF2Q9UG63 623 aa13.06□□□□□ -0.32
CTDSPL2-203ENST00000558791 LOC285556D6RIA3 1793 aa13.06□□□□□ -0.32
CTDSPL2-203ENST00000558791 MROH7-TTC4A0A0A0MT08 1334 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms