RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 PPP1R18Q6NYC8 613 aa12.47□□□□□ -0.41
SPG11-212ENST00000558790 ZNF296Q8WUU4 475 aaPredicted RBP12.47□□□□□ -0.41
SPG11-212ENST00000558790 JARID2Q92833 1246 aaPredicted RBP12.47□□□□□ -0.41
SPG11-212ENST00000558790 XDHP47989 1333 aa12.46□□□□□ -0.41
SPG11-212ENST00000558790 RNF223E7ERA6 249 aa12.46□□□□□ -0.41
SPG11-212ENST00000558790 PCCAP05165 728 aaPredicted RBP12.46□□□□□ -0.41
SPG11-212ENST00000558790 SCARF1Q14162 830 aa12.46□□□□□ -0.41
SPG11-212ENST00000558790 CCDC191Q8NCU4 936 aa12.46□□□□□ -0.41
SPG11-212ENST00000558790 AGBL3Q8NEM8 1001 aa12.46□□□□□ -0.41
SPG11-212ENST00000558790 GMLQ99445 158 aa12.46□□□□□ -0.41
SPG11-212ENST00000558790 PLSCR2Q9NRY7 297 aa12.46□□□□□ -0.41
SPG11-212ENST00000558790 SCAF8Q9UPN6 1271 aaKnown RBP12.46□□□□□ -0.41
SPG11-212ENST00000558790 OTOFQ9HC10 1997 aa12.46□□□□□ -0.41
SPG11-212ENST00000558790 SPTBN5Q9NRC6 3674 aaKnown RBP12.46□□□□□ -0.42
SPG11-212ENST00000558790 PITPNM2Q9BZ72 1349 aa12.45□□□□□ -0.42
SPG11-212ENST00000558790 PDE8AO60658 829 aa12.45□□□□□ -0.42
SPG11-212ENST00000558790 TBC1D8O95759 1140 aa12.45□□□□□ -0.42
SPG11-212ENST00000558790 DDX10Q13206 875 aaKnown RBP12.45□□□□□ -0.42
SPG11-212ENST00000558790 PTCRAQ6ISU1 281 aaPredicted RBP12.45□□□□□ -0.42
SPG11-212ENST00000558790 ZMYND15Q9H091 742 aa12.45□□□□□ -0.42
SPG11-212ENST00000558790 MYOZ2Q9NPC6 264 aa12.45□□□□□ -0.42
SPG11-212ENST00000558790 EVA1BQ9NVM1 165 aa12.45□□□□□ -0.42
SPG11-212ENST00000558790 IFT57Q9NWB7 429 aa12.45□□□□□ -0.42
SPG11-212ENST00000558790 CWC25Q9NXE8 425 aaPredicted RBP12.45□□□□□ -0.42
SPG11-212ENST00000558790 PLA2G2EQ9NZK7 142 aa12.45□□□□□ -0.42
SPG11-212ENST00000558790 MED23Q9ULK4 1368 aa12.44□□□□□ -0.42
SPG11-212ENST00000558790 WTIPA6NIX2 430 aaPredicted RBP12.44□□□□□ -0.42
SPG11-212ENST00000558790 APBB1O00213 710 aa12.44□□□□□ -0.42
SPG11-212ENST00000558790 ELL2O00472 640 aaPredicted RBP12.44□□□□□ -0.42
SPG11-212ENST00000558790 RAD21O60216 631 aa12.44□□□□□ -0.42
SPG11-212ENST00000558790 HSP90B1P14625 803 aaKnown RBP12.44□□□□□ -0.42
SPG11-212ENST00000558790 ABL2P42684 1182 aa12.44□□□□□ -0.42
SPG11-212ENST00000558790 KCNH2Q12809 1159 aa12.44□□□□□ -0.42
SPG11-212ENST00000558790 MOB2Q70IA6 237 aa12.44□□□□□ -0.42
SPG11-212ENST00000558790 ANKRD18AQ8IVF6 992 aa12.44□□□□□ -0.42
SPG11-212ENST00000558790 HDAC9Q9UKV0 1011 aa12.44□□□□□ -0.42
SPG11-212ENST00000558790 NDUFB9Q9Y6M9 179 aa12.44□□□□□ -0.42
SPG11-212ENST00000558790 ARAP2Q8WZ64 1704 aa12.44□□□□□ -0.42
SPG11-212ENST00000558790 USP17L3A6NCW0 530 aa12.43□□□□□ -0.42
SPG11-212ENST00000558790 USP17L4A6NCW7 530 aa12.43□□□□□ -0.42
SPG11-212ENST00000558790 GPR37L1O60883 481 aa12.43□□□□□ -0.42
SPG11-212ENST00000558790 CTSWP56202 376 aa12.43□□□□□ -0.42
SPG11-212ENST00000558790 FKBP1BP68106 108 aa12.43□□□□□ -0.42
SPG11-212ENST00000558790 PKN2Q16513 984 aaKnown RBP12.43□□□□□ -0.42
SPG11-212ENST00000558790 FBXO46Q6PJ61 603 aaPredicted RBP12.43□□□□□ -0.42
SPG11-212ENST00000558790 ERICH6Q7L0X2 663 aa12.43□□□□□ -0.42
SPG11-212ENST00000558790 USP17L1Q7RTZ2 530 aa12.43□□□□□ -0.42
SPG11-212ENST00000558790 METTL22Q9BUU2 404 aaPredicted RBP12.43□□□□□ -0.42
SPG11-212ENST00000558790 ATP2B4P23634 1241 aa12.42□□□□□ -0.42
SPG11-212ENST00000558790 GGCXP38435 758 aa12.42□□□□□ -0.42
SPG11-212ENST00000558790 GNAI1P63096 354 aa12.42□□□□□ -0.42
SPG11-212ENST00000558790 PLA2G2CQ5R387 149 aa12.42□□□□□ -0.42
SPG11-212ENST00000558790 PRAMEF18Q5VWM3 479 aa12.42□□□□□ -0.42
SPG11-212ENST00000558790 C8orf58Q8NAV2 365 aa12.42□□□□□ -0.42
SPG11-212ENST00000558790 MXD3Q9BW11 206 aa12.42□□□□□ -0.42
SPG11-212ENST00000558790 R3HDMLQ9H3Y0 253 aa12.42□□□□□ -0.42
SPG11-212ENST00000558790 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.42□□□□□ -0.42
SPG11-212ENST00000558790 MAP3K2Q9Y2U5 619 aa12.42□□□□□ -0.42
SPG11-212ENST00000558790 APAF1O14727 1248 aa12.41□□□□□ -0.42
SPG11-212ENST00000558790 DDX58O95786 925 aaKnown RBP12.41□□□□□ -0.42
SPG11-212ENST00000558790 IGKV5-2P06315 115 aa12.41□□□□□ -0.42
SPG11-212ENST00000558790 EN2P19622 333 aaPredicted RBP12.41□□□□□ -0.42
SPG11-212ENST00000558790 NBPF9Q3BBW0 867 aa12.41□□□□□ -0.42
SPG11-212ENST00000558790 DACT2Q5SW24 774 aa12.41□□□□□ -0.42
SPG11-212ENST00000558790 PODNQ7Z5L7 613 aa12.41□□□□□ -0.42
SPG11-212ENST00000558790 CDC5LQ99459 802 aaKnown RBP12.41□□□□□ -0.42
SPG11-212ENST00000558790 GREM2Q9H772 168 aa12.41□□□□□ -0.42
SPG11-212ENST00000558790 EYSQ5T1H1 3165 aa12.4□□□□□ -0.42
SPG11-212ENST00000558790 UBE2Q2LH0YL09 131 aa12.4□□□□□ -0.42
SPG11-212ENST00000558790 CALD1Q05682 793 aaKnown RBP12.4□□□□□ -0.42
SPG11-212ENST00000558790 TSPYL6Q8N831 410 aa12.4□□□□□ -0.42
SPG11-212ENST00000558790 TTLL11Q8NHH1 800 aa12.4□□□□□ -0.42
SPG11-212ENST00000558790 UNC93B1Q9H1C4 597 aa12.4□□□□□ -0.42
SPG11-212ENST00000558790 MINPP1Q9UNW1 487 aa12.4□□□□□ -0.42
SPG11-212ENST00000558790 PI4KAP2A4QPH2 592 aa12.39□□□□□ -0.43
SPG11-212ENST00000558790 WNT10BO00744 389 aa12.39□□□□□ -0.43
SPG11-212ENST00000558790 SASH1O94885 1247 aa12.39□□□□□ -0.43
SPG11-212ENST00000558790 KLRK1P26718 216 aa12.39□□□□□ -0.43
SPG11-212ENST00000558790 CCT4P50991 539 aaKnown RBP12.39□□□□□ -0.43
SPG11-212ENST00000558790 CCDC30Q5VVM6 783 aa12.39□□□□□ -0.43
SPG11-212ENST00000558790 PI4KAP1Q8N8J0 262 aa12.39□□□□□ -0.43
SPG11-212ENST00000558790 ANKLE1Q8NAG6 615 aa12.39□□□□□ -0.43
SPG11-212ENST00000558790 PRM3Q9NNZ6 103 aa12.39□□□□□ -0.43
SPG11-212ENST00000558790 BSDC1Q9NW68 430 aaPredicted RBP12.39□□□□□ -0.43
SPG11-212ENST00000558790 COL1A1P02452 1464 aaPredicted RBP12.39□□□□□ -0.43
SPG11-212ENST00000558790 SSC5DA1L4H1 1573 aa12.39□□□□□ -0.43
SPG11-212ENST00000558790 MYO3BQ8WXR4 1341 aa12.38□□□□□ -0.43
SPG11-212ENST00000558790 A6NJR5 290 aa12.38□□□□□ -0.43
SPG11-212ENST00000558790 H0YGN5 161 aa12.38□□□□□ -0.43
SPG11-212ENST00000558790 GPR25O00155 361 aa12.38□□□□□ -0.43
SPG11-212ENST00000558790 CWF19L2Q2TBE0 894 aaKnown RBP12.38□□□□□ -0.43
SPG11-212ENST00000558790 KSR2Q6VAB6 950 aa12.38□□□□□ -0.43
SPG11-212ENST00000558790 TXNRD3Q86VQ6 643 aa12.38□□□□□ -0.43
SPG11-212ENST00000558790 PRKRIP1Q9H875 184 aaPredicted RBP12.38□□□□□ -0.43
SPG11-212ENST00000558790 NEURL1BA8MQ27 555 aa12.37□□□□□ -0.43
SPG11-212ENST00000558790 IRF5Q13568 498 aa12.37□□□□□ -0.43
SPG11-212ENST00000558790 STRIP1Q5VSL9 837 aa12.37□□□□□ -0.43
SPG11-212ENST00000558790 UBE3BQ7Z3V4 1068 aa12.37□□□□□ -0.43
SPG11-212ENST00000558790 OGFOD1Q8N543 542 aa12.37□□□□□ -0.43
SPG11-212ENST00000558790 TSR2Q969E8 191 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms