RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 TTF2Q9UNY4 1162 aaKnown RBP9.53□□□□□ -0.88
RTF1-205ENST00000558298 DDX49Q9Y6V7 483 aaKnown RBP9.53□□□□□ -0.88
RTF1-205ENST00000558298 DDX60LQ5H9U9 1706 aaKnown RBP9.53□□□□□ -0.88
RTF1-205ENST00000558298 SALL3Q9BXA9 1300 aa9.53□□□□□ -0.88
RTF1-205ENST00000558298 CCDC66A2RUB6 948 aa9.52□□□□□ -0.89
RTF1-205ENST00000558298 UNCXA6NJT0 531 aa9.52□□□□□ -0.89
RTF1-205ENST00000558298 K7ELQ4 463 aaPredicted RBP9.52□□□□□ -0.89
RTF1-205ENST00000558298 MYO1BO43795 1136 aa9.52□□□□□ -0.89
RTF1-205ENST00000558298 LDHBP07195 334 aaKnown RBP9.52□□□□□ -0.89
RTF1-205ENST00000558298 ATP5JP18859 108 aa9.52□□□□□ -0.89
RTF1-205ENST00000558298 CRKP46108 304 aa9.52□□□□□ -0.89
RTF1-205ENST00000558298 FKBP1BP68106 108 aa9.52□□□□□ -0.89
RTF1-205ENST00000558298 TNFAIP1Q13829 316 aa9.52□□□□□ -0.89
RTF1-205ENST00000558298 DLGAP5Q15398 846 aa9.52□□□□□ -0.89
RTF1-205ENST00000558298 CFAP100Q494V2 611 aa9.52□□□□□ -0.89
RTF1-205ENST00000558298 CYP4F22Q6NT55 531 aa9.52□□□□□ -0.89
RTF1-205ENST00000558298 FAM83AQ86UY5 434 aa9.52□□□□□ -0.89
RTF1-205ENST00000558298 AACSQ86V21 672 aa9.52□□□□□ -0.89
RTF1-205ENST00000558298 NEUROD6Q96NK8 337 aa9.52□□□□□ -0.89
RTF1-205ENST00000558298 GBA2Q9HCG7 927 aaPredicted RBP9.52□□□□□ -0.89
RTF1-205ENST00000558298 JAG2Q9Y219 1238 aa9.52□□□□□ -0.89
RTF1-205ENST00000558298 R3HCC1Q9Y3T6 440 aaKnown RBP9.52□□□□□ -0.89
RTF1-205ENST00000558298 TTC41PQ6P2S7 1318 aa9.52□□□□□ -0.89
RTF1-205ENST00000558298 PRDX5P30044 214 aa9.51□□□□□ -0.89
RTF1-205ENST00000558298 SLC20A2Q08357 652 aa9.51□□□□□ -0.89
RTF1-205ENST00000558298 TTF1Q15361 905 aaPredicted RBP9.51□□□□□ -0.89
RTF1-205ENST00000558298 SYCP1Q15431 976 aa9.51□□□□□ -0.89
RTF1-205ENST00000558298 UVSSAQ2YD98 709 aa9.51□□□□□ -0.89
RTF1-205ENST00000558298 TTC39AQ5SRH9 613 aa9.51□□□□□ -0.89
RTF1-205ENST00000558298 GORABQ5T7V8 394 aa9.51□□□□□ -0.89
RTF1-205ENST00000558298 APOBEC3HQ6NTF7 200 aaKnown RBP9.51□□□□□ -0.89
RTF1-205ENST00000558298 FBXW7Q969H0 707 aa9.51□□□□□ -0.89
RTF1-205ENST00000558298 PRMT6Q96LA8 375 aaPredicted RBP9.51□□□□□ -0.89
RTF1-205ENST00000558298 TLR7Q9NYK1 1049 aaKnown RBP9.51□□□□□ -0.89
RTF1-205ENST00000558298 KIF3AQ9Y496 699 aa9.51□□□□□ -0.89
RTF1-205ENST00000558298 FOXN1O15353 648 aa9.5□□□□□ -0.89
RTF1-205ENST00000558298 SEC24BO95487 1268 aa9.5□□□□□ -0.89
RTF1-205ENST00000558298 SLC10A3P09131 477 aa9.5□□□□□ -0.89
RTF1-205ENST00000558298 IFIT2P09913 472 aaKnown RBP9.5□□□□□ -0.89
RTF1-205ENST00000558298 MAP2K2P36507 400 aa9.5□□□□□ -0.89
RTF1-205ENST00000558298 ECE1P42892 770 aa9.5□□□□□ -0.89
RTF1-205ENST00000558298 HUNKP57058 714 aa9.5□□□□□ -0.89
RTF1-205ENST00000558298 GSTO1P78417 241 aa9.5□□□□□ -0.89
RTF1-205ENST00000558298 GABPB1Q06547 395 aaPredicted RBP9.5□□□□□ -0.89
RTF1-205ENST00000558298 MAP3K11Q16584 847 aa9.5□□□□□ -0.89
RTF1-205ENST00000558298 BMP2KLQ5H9B9 411 aa9.5□□□□□ -0.89
RTF1-205ENST00000558298 ZNF384Q8TF68 577 aa9.5□□□□□ -0.89
RTF1-205ENST00000558298 NSUN4Q96CB9 384 aaKnown RBP9.5□□□□□ -0.89
RTF1-205ENST00000558298 ZIC5Q96T25 663 aa9.5□□□□□ -0.89
RTF1-205ENST00000558298 IDI2Q9BXS1 227 aa9.5□□□□□ -0.89
RTF1-205ENST00000558298 IL1RAPL2Q9NP60 686 aa9.5□□□□□ -0.89
RTF1-205ENST00000558298 SCAF8Q9UPN6 1271 aaKnown RBP9.5□□□□□ -0.89
RTF1-205ENST00000558298 IQSEC3Q9UPP2 1182 aaPredicted RBP9.5□□□□□ -0.89
RTF1-205ENST00000558298 DAGLAQ9Y4D2 1042 aa9.5□□□□□ -0.89
RTF1-205ENST00000558298 MROH7-TTC4A0A0A0MT08 1334 aa9.5□□□□□ -0.89
RTF1-205ENST00000558298 ATRNL1Q5VV63 1379 aa9.5□□□□□ -0.89
RTF1-205ENST00000558298 GPR75-ASB3A0A0A6YYF3 556 aa9.49□□□□□ -0.89
RTF1-205ENST00000558298 AOC2O75106 756 aa9.49□□□□□ -0.89
RTF1-205ENST00000558298 CYP2E1P05181 493 aaPredicted RBP9.49□□□□□ -0.89
RTF1-205ENST00000558298 CDK11BP21127 795 aaKnown RBP9.49□□□□□ -0.89
RTF1-205ENST00000558298 PPP4CP60510 307 aa9.49□□□□□ -0.89
RTF1-205ENST00000558298 RABEP1Q15276 862 aa9.49□□□□□ -0.89
RTF1-205ENST00000558298 RGMBQ6NW40 437 aa9.49□□□□□ -0.89
RTF1-205ENST00000558298 GPATCH3Q96I76 525 aa9.49□□□□□ -0.89
RTF1-205ENST00000558298 TEPSINQ96N21 525 aa9.49□□□□□ -0.89
RTF1-205ENST00000558298 HAUS7Q99871 368 aa9.49□□□□□ -0.89
RTF1-205ENST00000558298 CCDC8Q9H0W5 538 aaPredicted RBP9.49□□□□□ -0.89
RTF1-205ENST00000558298 ZNF408Q9H9D4 720 aa9.49□□□□□ -0.89
RTF1-205ENST00000558298 ECHDC1Q9NTX5 307 aa9.49□□□□□ -0.89
RTF1-205ENST00000558298 F8W031 263 aaPredicted RBP9.48□□□□□ -0.89
RTF1-205ENST00000558298 LDHCP07864 332 aa9.48□□□□□ -0.89
RTF1-205ENST00000558298 MAP2K1Q02750 393 aaPredicted RBP9.48□□□□□ -0.89
RTF1-205ENST00000558298 MECOMQ03112 1051 aa9.48□□□□□ -0.89
RTF1-205ENST00000558298 NOGQ13253 232 aa9.48□□□□□ -0.89
RTF1-205ENST00000558298 LDLRAD1Q5T700 205 aa9.48□□□□□ -0.89
RTF1-205ENST00000558298 COL13A1Q5TAT6 717 aaPredicted RBP9.48□□□□□ -0.89
RTF1-205ENST00000558298 PRAMEF18Q5VWM3 479 aa9.48□□□□□ -0.89
RTF1-205ENST00000558298 PI16Q6UXB8 463 aa9.48□□□□□ -0.89
RTF1-205ENST00000558298 DZIP1Q86YF9 867 aaKnown RBP9.48□□□□□ -0.89
RTF1-205ENST00000558298 RASAL3Q86YV0 1011 aa9.48□□□□□ -0.89
RTF1-205ENST00000558298 C2orf69Q8N8R5 385 aa9.48□□□□□ -0.89
RTF1-205ENST00000558298 DEFB129Q9H1M3 183 aa9.48□□□□□ -0.89
RTF1-205ENST00000558298 OSBPL3Q9H4L5 887 aa9.48□□□□□ -0.89
RTF1-205ENST00000558298 ZNF70Q9UC06 446 aaPredicted RBP9.48□□□□□ -0.89
RTF1-205ENST00000558298 STAP2Q9UGK3 403 aa9.48□□□□□ -0.89
RTF1-205ENST00000558298 TAOK2Q9UL54 1235 aa9.48□□□□□ -0.89
RTF1-205ENST00000558298 AK9Q5TCS8 1911 aa9.48□□□□□ -0.89
RTF1-205ENST00000558298 SIPA1L1O43166 1804 aa9.47□□□□□ -0.89
RTF1-205ENST00000558298 NAV1Q8NEY1 1877 aa9.47□□□□□ -0.89
RTF1-205ENST00000558298 ERC2O15083 957 aa9.47□□□□□ -0.89
RTF1-205ENST00000558298 ENTPD3O75355 529 aa9.47□□□□□ -0.89
RTF1-205ENST00000558298 GLRX3O76003 335 aaKnown RBP9.47□□□□□ -0.89
RTF1-205ENST00000558298 HSPA8P11142 646 aaKnown RBP9.47□□□□□ -0.89
RTF1-205ENST00000558298 PLCG2P16885 1265 aa9.47□□□□□ -0.89
RTF1-205ENST00000558298 ZSCAN20P17040 1043 aaPredicted RBP9.47□□□□□ -0.89
RTF1-205ENST00000558298 ZAP70P43403 619 aa9.47□□□□□ -0.89
RTF1-205ENST00000558298 TNNI2P48788 182 aa9.47□□□□□ -0.89
RTF1-205ENST00000558298 MCM2P49736 904 aa9.47□□□□□ -0.89
RTF1-205ENST00000558298 MFAP1P55081 439 aaKnown RBP9.47□□□□□ -0.89
RTF1-205ENST00000558298 RHBDL3P58872 404 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms