RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.24
ALPK3-202ENST00000558077 BEGAINQ9BUH8 593 aa16.58■□□□□ 0.24
ALPK3-202ENST00000558077 SNCAIPQ9Y6H5 919 aa16.58■□□□□ 0.24
ALPK3-202ENST00000558077 FOCADQ5VW36 1801 aa16.57■□□□□ 0.24
ALPK3-202ENST00000558077 MAP4K4O95819 1239 aaPredicted RBP16.57■□□□□ 0.24
ALPK3-202ENST00000558077 IFIT2P09913 472 aaKnown RBP16.57■□□□□ 0.24
ALPK3-202ENST00000558077 NAA16Q6N069 864 aaPredicted RBP16.57■□□□□ 0.24
ALPK3-202ENST00000558077 SH3RF3Q8TEJ3 882 aaPredicted RBP16.57■□□□□ 0.24
ALPK3-202ENST00000558077 ABHD8Q96I13 439 aa16.57■□□□□ 0.24
ALPK3-202ENST00000558077 LRRCC1Q9C099 1032 aa16.57■□□□□ 0.24
ALPK3-202ENST00000558077 ELP3Q9H9T3 547 aa16.57■□□□□ 0.24
ALPK3-202ENST00000558077 SAGE1Q9NXZ1 904 aa16.57■□□□□ 0.24
ALPK3-202ENST00000558077 PHF20L1A8MW92 1017 aa16.56■□□□□ 0.24
ALPK3-202ENST00000558077 TRPA1O75762 1119 aa16.56■□□□□ 0.24
ALPK3-202ENST00000558077 ZBTB48P10074 688 aaPredicted RBP16.56■□□□□ 0.24
ALPK3-202ENST00000558077 INPP5BP32019 993 aa16.56■□□□□ 0.24
ALPK3-202ENST00000558077 ZKSCAN4Q969J2 545 aaPredicted RBP16.56■□□□□ 0.24
ALPK3-202ENST00000558077 MS4A4AQ96JQ5 239 aa16.56■□□□□ 0.24
ALPK3-202ENST00000558077 ZNF341Q9BYN7 854 aa16.56■□□□□ 0.24
ALPK3-202ENST00000558077 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.56■□□□□ 0.24
ALPK3-202ENST00000558077 SIPA1L1O43166 1804 aa16.55■□□□□ 0.24
ALPK3-202ENST00000558077 TESPA1A2RU30 521 aaPredicted RBP16.55■□□□□ 0.24
ALPK3-202ENST00000558077 ATP5JP18859 108 aa16.55■□□□□ 0.24
ALPK3-202ENST00000558077 DCAF15Q66K64 600 aa16.55■□□□□ 0.24
ALPK3-202ENST00000558077 OPTNQ96CV9 577 aa16.55■□□□□ 0.24
ALPK3-202ENST00000558077 HOOK2Q96ED9 719 aa16.55■□□□□ 0.24
ALPK3-202ENST00000558077 EDC3Q96F86 508 aaKnown RBP16.55■□□□□ 0.24
ALPK3-202ENST00000558077 WRNIP1Q96S55 665 aa16.55■□□□□ 0.24
ALPK3-202ENST00000558077 AATFQ9NY61 560 aaKnown RBP eCLIP16.55■□□□□ 0.24
ALPK3-202ENST00000558077 SPDYE5A6NIY4 337 aa16.54■□□□□ 0.24
ALPK3-202ENST00000558077 IDH1O75874 414 aaKnown RBP16.54■□□□□ 0.24
ALPK3-202ENST00000558077 CYP7A1P22680 504 aa16.54■□□□□ 0.24
ALPK3-202ENST00000558077 DYNLL1P63167 89 aaKnown RBP16.54■□□□□ 0.24
ALPK3-202ENST00000558077 PICALMQ13492 652 aa16.54■□□□□ 0.24
ALPK3-202ENST00000558077 PTPN18Q99952 460 aa16.54■□□□□ 0.24
ALPK3-202ENST00000558077 R3HDMLQ9H3Y0 253 aa16.54■□□□□ 0.24
ALPK3-202ENST00000558077 COL2A1P02458 1487 aaPredicted RBP16.54■□□□□ 0.24
ALPK3-202ENST00000558077 MANSC4A6NHS7 340 aaPredicted RBP16.53■□□□□ 0.24
ALPK3-202ENST00000558077 IGF2BP3O00425 579 aaKnown RBP eCLIP16.53■□□□□ 0.24
ALPK3-202ENST00000558077 TEX11Q8IYF3 940 aa16.53■□□□□ 0.24
ALPK3-202ENST00000558077 MAGEB6Q8N7X4 407 aa16.53■□□□□ 0.24
ALPK3-202ENST00000558077 HAUS7Q99871 368 aa16.53■□□□□ 0.24
ALPK3-202ENST00000558077 OSBPL5Q9H0X9 879 aaPredicted RBP16.53■□□□□ 0.24
ALPK3-202ENST00000558077 BCL11AQ9H165 835 aa16.53■□□□□ 0.24
ALPK3-202ENST00000558077 BOLA2Q9H3K6 86 aa16.53■□□□□ 0.24
ALPK3-202ENST00000558077 TCRBV5S4A2TA0A5A2 114 aa16.52■□□□□ 0.24
ALPK3-202ENST00000558077 GOLIM4O00461 696 aa16.52■□□□□ 0.24
ALPK3-202ENST00000558077 BAG3O95817 575 aa16.52■□□□□ 0.24
ALPK3-202ENST00000558077 SREBF2Q12772 1141 aa16.52■□□□□ 0.24
ALPK3-202ENST00000558077 NOL9Q5SY16 702 aaKnown RBP16.52■□□□□ 0.24
ALPK3-202ENST00000558077 IFNL1Q8IU54 200 aa16.52■□□□□ 0.24
ALPK3-202ENST00000558077 RIOK1Q9BRS2 568 aaKnown RBP16.52■□□□□ 0.24
ALPK3-202ENST00000558077 CFHR5Q9BXR6 569 aa16.52■□□□□ 0.24
ALPK3-202ENST00000558077 CSADQ9Y600 493 aa16.52■□□□□ 0.24
ALPK3-202ENST00000558077 TBC1D12O60347 775 aa16.51■□□□□ 0.23
ALPK3-202ENST00000558077 TBC1D8O95759 1140 aa16.51■□□□□ 0.23
ALPK3-202ENST00000558077 PDE6AP16499 860 aa16.51■□□□□ 0.23
ALPK3-202ENST00000558077 INHBEP58166 350 aa16.51■□□□□ 0.23
ALPK3-202ENST00000558077 MAP3K12Q12852 859 aa16.51■□□□□ 0.23
ALPK3-202ENST00000558077 RRP1BQ14684 758 aaKnown RBP16.51■□□□□ 0.23
ALPK3-202ENST00000558077 SLFNL1Q499Z3 407 aa16.51■□□□□ 0.23
ALPK3-202ENST00000558077 TMED8Q6PL24 325 aaPredicted RBP16.51■□□□□ 0.23
ALPK3-202ENST00000558077 ERO1BQ86YB8 467 aa16.51■□□□□ 0.23
ALPK3-202ENST00000558077 MIGA1Q8NAN2 632 aa16.51■□□□□ 0.23
ALPK3-202ENST00000558077 EXOC6Q8TAG9 804 aa16.51■□□□□ 0.23
ALPK3-202ENST00000558077 BRI3BPQ8WY22 251 aa16.51■□□□□ 0.23
ALPK3-202ENST00000558077 DNAJC2Q99543 621 aaKnown RBP16.51■□□□□ 0.23
ALPK3-202ENST00000558077 PHIPQ8WWQ0 1821 aa16.51■□□□□ 0.23
ALPK3-202ENST00000558077 MYH7P12883 1935 aa16.51■□□□□ 0.23
ALPK3-202ENST00000558077 CHGBP05060 677 aa16.5■□□□□ 0.23
ALPK3-202ENST00000558077 PLCG2P16885 1265 aa16.5■□□□□ 0.23
ALPK3-202ENST00000558077 HDAC1Q13547 482 aaPredicted RBP16.5■□□□□ 0.23
ALPK3-202ENST00000558077 TTF1Q15361 905 aaPredicted RBP16.5■□□□□ 0.23
ALPK3-202ENST00000558077 ZSCAN29Q8IWY8 852 aaPredicted RBP16.5■□□□□ 0.23
ALPK3-202ENST00000558077 OTUD7AQ8TE49 926 aaPredicted RBP16.5■□□□□ 0.23
ALPK3-202ENST00000558077 TGFBRAP1Q8WUH2 860 aa16.5■□□□□ 0.23
ALPK3-202ENST00000558077 OTUD5Q96G74 571 aa16.5■□□□□ 0.23
ALPK3-202ENST00000558077 PAG1Q9NWQ8 432 aa16.5■□□□□ 0.23
ALPK3-202ENST00000558077 SUPT16HQ9Y5B9 1047 aaKnown RBP16.5■□□□□ 0.23
ALPK3-202ENST00000558077 MYH1P12882 1939 aa16.5■□□□□ 0.23
ALPK3-202ENST00000558077 FLT1P17948 1338 aa16.49■□□□□ 0.23
ALPK3-202ENST00000558077 FAM196BA6NMK8 535 aa16.49■□□□□ 0.23
ALPK3-202ENST00000558077 IRF6O14896 467 aa16.49■□□□□ 0.23
ALPK3-202ENST00000558077 PPATQ06203 517 aa16.49■□□□□ 0.23
ALPK3-202ENST00000558077 PPIL2Q13356 520 aa16.49■□□□□ 0.23
ALPK3-202ENST00000558077 SLC9C2Q5TAH2 1124 aa16.49■□□□□ 0.23
ALPK3-202ENST00000558077 METTL16Q86W50 562 aaKnown RBP16.49■□□□□ 0.23
ALPK3-202ENST00000558077 MAPKAPK5Q8IW41 473 aa16.49■□□□□ 0.23
ALPK3-202ENST00000558077 ECHDC1Q9NTX5 307 aa16.49■□□□□ 0.23
ALPK3-202ENST00000558077 SALL3Q9BXA9 1300 aa16.48■□□□□ 0.23
ALPK3-202ENST00000558077 ZNF532Q9HCE3 1301 aa16.48■□□□□ 0.23
ALPK3-202ENST00000558077 DOCK1Q14185 1865 aa16.48■□□□□ 0.23
ALPK3-202ENST00000558077 MOGSQ13724 837 aa16.48■□□□□ 0.23
ALPK3-202ENST00000558077 NOM1Q5C9Z4 860 aaKnown RBP16.48■□□□□ 0.23
ALPK3-202ENST00000558077 TSHZ3Q63HK5 1081 aa16.48■□□□□ 0.23
ALPK3-202ENST00000558077 NOL10Q9BSC4 688 aaKnown RBP16.48■□□□□ 0.23
ALPK3-202ENST00000558077 DNAJC18Q9H819 358 aa16.48■□□□□ 0.23
ALPK3-202ENST00000558077 KCNH4Q9UQ05 1017 aa16.48■□□□□ 0.23
ALPK3-202ENST00000558077 PTPRFP10586 1907 aa16.47■□□□□ 0.23
ALPK3-202ENST00000558077 GPR25O00155 361 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms