RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 ZBED3Q96IU2 234 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-223ENST00000557511 ZDHHC15Q96MV8 337 aa10.16□□□□□ -0.78
PSEN1-223ENST00000557511 DEFB129Q9H1M3 183 aa10.16□□□□□ -0.78
PSEN1-223ENST00000557511 EMILIN3Q9NT22 766 aa10.16□□□□□ -0.78
PSEN1-223ENST00000557511 HMG20BQ9P0W2 317 aa10.16□□□□□ -0.78
PSEN1-223ENST00000557511 ZNF70Q9UC06 446 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-223ENST00000557511 SUPT16HQ9Y5B9 1047 aaKnown RBP10.16□□□□□ -0.78
PSEN1-223ENST00000557511 TLL2Q9Y6L7 1015 aa10.16□□□□□ -0.78
PSEN1-223ENST00000557511 COL1A1P02452 1464 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-223ENST00000557511 CNTNAP1P78357 1384 aa10.15□□□□□ -0.78
PSEN1-223ENST00000557511 RASSF10A6NK89 507 aa10.15□□□□□ -0.78
PSEN1-223ENST00000557511 TCP10L2B9ZVM9 353 aa10.15□□□□□ -0.78
PSEN1-223ENST00000557511 CAMK2BQ13554 666 aa10.15□□□□□ -0.78
PSEN1-223ENST00000557511 TTF1Q15361 905 aaPredicted RBP10.15□□□□□ -0.78
PSEN1-223ENST00000557511 CST9Q5W186 159 aa10.15□□□□□ -0.78
PSEN1-223ENST00000557511 SIRT2Q8IXJ6 389 aa10.15□□□□□ -0.78
PSEN1-223ENST00000557511 EAF2Q96CJ1 260 aaPredicted RBP10.15□□□□□ -0.78
PSEN1-223ENST00000557511 HHIPL1Q96JK4 782 aa10.15□□□□□ -0.78
PSEN1-223ENST00000557511 ZNF512BQ96KM6 892 aaPredicted RBP10.15□□□□□ -0.78
PSEN1-223ENST00000557511 BEGAINQ9BUH8 593 aa10.15□□□□□ -0.78
PSEN1-223ENST00000557511 SNRKQ9NRH2 765 aa10.15□□□□□ -0.78
PSEN1-223ENST00000557511 DBNLQ9UJU6 430 aaKnown RBP10.15□□□□□ -0.78
PSEN1-223ENST00000557511 LHX6Q9UPM6 363 aa10.15□□□□□ -0.78
PSEN1-223ENST00000557511 BAG3O95817 575 aa10.14□□□□□ -0.79
PSEN1-223ENST00000557511 MCAMP43121 646 aa10.14□□□□□ -0.79
PSEN1-223ENST00000557511 RASA3Q14644 834 aa10.14□□□□□ -0.79
PSEN1-223ENST00000557511 GRIK5Q16478 980 aa10.14□□□□□ -0.79
PSEN1-223ENST00000557511 SAPCD2Q86UD0 394 aa10.14□□□□□ -0.79
PSEN1-223ENST00000557511 CDAN1Q8IWY9 1227 aa10.14□□□□□ -0.79
PSEN1-223ENST00000557511 DNAJC5GQ8N7S2 189 aa10.14□□□□□ -0.79
PSEN1-223ENST00000557511 CCDC102AQ96A19 550 aa10.14□□□□□ -0.79
PSEN1-223ENST00000557511 AIDAQ96BJ3 306 aa10.14□□□□□ -0.79
PSEN1-223ENST00000557511 CAPNS2Q96L46 248 aa10.14□□□□□ -0.79
PSEN1-223ENST00000557511 RWDD1Q9H446 243 aaPredicted RBP10.14□□□□□ -0.79
PSEN1-223ENST00000557511 DCTPP1Q9H773 170 aa10.14□□□□□ -0.79
PSEN1-223ENST00000557511 USP40Q9NVE5 1235 aa10.14□□□□□ -0.79
PSEN1-223ENST00000557511 SCAF8Q9UPN6 1271 aaKnown RBP10.14□□□□□ -0.79
PSEN1-223ENST00000557511 WDR33Q9C0J8 1336 aaKnown RBP10.13□□□□□ -0.79
PSEN1-223ENST00000557511 DPYSL4O14531 572 aa10.13□□□□□ -0.79
PSEN1-223ENST00000557511 EVI5O60447 810 aa10.13□□□□□ -0.79
PSEN1-223ENST00000557511 MAP4K4O95819 1239 aaPredicted RBP10.13□□□□□ -0.79
PSEN1-223ENST00000557511 ZAP70P43403 619 aa10.13□□□□□ -0.79
PSEN1-223ENST00000557511 IREB2P48200 963 aaKnown RBP10.13□□□□□ -0.79
PSEN1-223ENST00000557511 VEGFBP49765 207 aa10.13□□□□□ -0.79
PSEN1-223ENST00000557511 ZNF157P51786 506 aaPredicted RBP10.13□□□□□ -0.79
PSEN1-223ENST00000557511 MAP3K12Q12852 859 aa10.13□□□□□ -0.79
PSEN1-223ENST00000557511 PRKG1Q13976 671 aa10.13□□□□□ -0.79
PSEN1-223ENST00000557511 DIXDC1Q155Q3 683 aa10.13□□□□□ -0.79
PSEN1-223ENST00000557511 FKBP1CQ5VVH2 108 aa10.13□□□□□ -0.79
PSEN1-223ENST00000557511 PRAMEF18Q5VWM3 479 aa10.13□□□□□ -0.79
PSEN1-223ENST00000557511 NAA16Q6N069 864 aaPredicted RBP10.13□□□□□ -0.79
PSEN1-223ENST00000557511 RGMBQ6NW40 437 aa10.13□□□□□ -0.79
PSEN1-223ENST00000557511 TMED8Q6PL24 325 aaPredicted RBP10.13□□□□□ -0.79
PSEN1-223ENST00000557511 TLR7Q9NYK1 1049 aaKnown RBP10.13□□□□□ -0.79
PSEN1-223ENST00000557511 PCDH10Q9P2E7 1040 aa10.13□□□□□ -0.79
PSEN1-223ENST00000557511 DAGLAQ9Y4D2 1042 aa10.13□□□□□ -0.79
PSEN1-223ENST00000557511 PCDHAC2Q9Y5I4 1007 aa10.13□□□□□ -0.79
PSEN1-223ENST00000557511 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.13□□□□□ -0.79
PSEN1-223ENST00000557511 MROH7-TTC4A0A0A0MT08 1334 aa10.12□□□□□ -0.79
PSEN1-223ENST00000557511 IDH1O75874 414 aaKnown RBP10.12□□□□□ -0.79
PSEN1-223ENST00000557511 BTDP43251 543 aa10.12□□□□□ -0.79
PSEN1-223ENST00000557511 MAP2K1Q02750 393 aaPredicted RBP10.12□□□□□ -0.79
PSEN1-223ENST00000557511 MECOMQ03112 1051 aa10.12□□□□□ -0.79
PSEN1-223ENST00000557511 DCAF15Q66K64 600 aa10.12□□□□□ -0.79
PSEN1-223ENST00000557511 CYP4F22Q6NT55 531 aa10.12□□□□□ -0.79
PSEN1-223ENST00000557511 APOBEC3HQ6NTF7 200 aaKnown RBP10.12□□□□□ -0.79
PSEN1-223ENST00000557511 DLK2Q6UY11 383 aa10.12□□□□□ -0.79
PSEN1-223ENST00000557511 TBC1D9Q6ZT07 1266 aa10.12□□□□□ -0.79
PSEN1-223ENST00000557511 FAM83AQ86UY5 434 aa10.12□□□□□ -0.79
PSEN1-223ENST00000557511 CERS3Q8IU89 383 aa10.12□□□□□ -0.79
PSEN1-223ENST00000557511 ZSCAN29Q8IWY8 852 aaPredicted RBP10.12□□□□□ -0.79
PSEN1-223ENST00000557511 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.12□□□□□ -0.79
PSEN1-223ENST00000557511 GCC1Q96CN9 775 aa10.12□□□□□ -0.79
PSEN1-223ENST00000557511 DNAJC2Q99543 621 aaKnown RBP10.12□□□□□ -0.79
PSEN1-223ENST00000557511 ANGEL1Q9UNK9 670 aaKnown RBP10.12□□□□□ -0.79
PSEN1-223ENST00000557511 ARAP2Q8WZ64 1704 aa10.12□□□□□ -0.79
PSEN1-223ENST00000557511 UBE2Q2LH0YL09 131 aa10.11□□□□□ -0.79
PSEN1-223ENST00000557511 ERC2O15083 957 aa10.11□□□□□ -0.79
PSEN1-223ENST00000557511 MAP2K2P36507 400 aa10.11□□□□□ -0.79
PSEN1-223ENST00000557511 NOGQ13253 232 aa10.11□□□□□ -0.79
PSEN1-223ENST00000557511 CDC42EP5Q6NZY7 148 aa10.11□□□□□ -0.79
PSEN1-223ENST00000557511 PI16Q6UXB8 463 aa10.11□□□□□ -0.79
PSEN1-223ENST00000557511 JMYQ8N9B5 988 aa10.11□□□□□ -0.79
PSEN1-223ENST00000557511 FAM151AQ8WW52 585 aa10.11□□□□□ -0.79
PSEN1-223ENST00000557511 NSUN4Q96CB9 384 aaKnown RBP10.11□□□□□ -0.79
PSEN1-223ENST00000557511 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.11□□□□□ -0.79
PSEN1-223ENST00000557511 PCDHB15Q9Y5E8 787 aa10.11□□□□□ -0.79
PSEN1-223ENST00000557511 GAKO14976 1311 aa10.1□□□□□ -0.79
PSEN1-223ENST00000557511 MYH13Q9UKX3 1938 aa10.1□□□□□ -0.79
PSEN1-223ENST00000557511 UNCXA6NJT0 531 aa10.1□□□□□ -0.79
PSEN1-223ENST00000557511 SMARCA5O60264 1052 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-223ENST00000557511 CYP2E1P05181 493 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-223ENST00000557511 CYP7A1P22680 504 aa10.1□□□□□ -0.79
PSEN1-223ENST00000557511 CACNB3P54284 484 aa10.1□□□□□ -0.79
PSEN1-223ENST00000557511 TCP10Q12799 353 aa10.1□□□□□ -0.79
PSEN1-223ENST00000557511 HDAC1Q13547 482 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-223ENST00000557511 LRRFIP1Q32MZ4 808 aaKnown RBP10.1□□□□□ -0.79
PSEN1-223ENST00000557511 NBPF12Q5TAG4 269 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-223ENST00000557511 ANKRD45Q5TZF3 282 aa10.1□□□□□ -0.79
PSEN1-223ENST00000557511 ZSCAN25Q6NSZ9 544 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms