RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ZNF384Q8TF68 577 aa27.83■■■□□ 2.05
ACTN1-220ENST00000556433 C1orf115Q9H7X2 142 aa27.83■■■□□ 2.05
ACTN1-220ENST00000556433 RAI14Q9P0K7 980 aa27.83■■■□□ 2.05
ACTN1-220ENST00000556433 DDTLA6NHG4 134 aaPredicted RBP27.82■■■□□ 2.04
ACTN1-220ENST00000556433 PHF20L1A8MW92 1017 aa27.82■■■□□ 2.04
ACTN1-220ENST00000556433 ANKRD23Q86SG2 305 aa27.82■■■□□ 2.04
ACTN1-220ENST00000556433 ITPRIPQ8IWB1 547 aa27.82■■■□□ 2.04
ACTN1-220ENST00000556433 NSUN4Q96CB9 384 aaKnown RBP27.82■■■□□ 2.04
ACTN1-220ENST00000556433 PDE4DIPQ5VU43 2346 aa27.82■■■□□ 2.04
ACTN1-220ENST00000556433 ATRNL1Q5VV63 1379 aa27.82■■■□□ 2.04
ACTN1-220ENST00000556433 SURF6O75683 361 aaKnown RBP27.81■■■□□ 2.04
ACTN1-220ENST00000556433 MCAMP43121 646 aa27.81■■■□□ 2.04
ACTN1-220ENST00000556433 RHBDL3P58872 404 aa27.81■■■□□ 2.04
ACTN1-220ENST00000556433 KIF22Q14807 665 aa27.81■■■□□ 2.04
ACTN1-220ENST00000556433 ARMC5Q96C12 935 aa27.81■■■□□ 2.04
ACTN1-220ENST00000556433 GPR108Q9NPR9 543 aa27.81■■■□□ 2.04
ACTN1-220ENST00000556433 RFX7Q2KHR2 1363 aa27.81■■■□□ 2.04
ACTN1-220ENST00000556433 PDHXO00330 501 aa27.8■■■□□ 2.04
ACTN1-220ENST00000556433 CXCL11O14625 94 aa27.8■■■□□ 2.04
ACTN1-220ENST00000556433 MAP3K10Q02779 954 aa27.8■■■□□ 2.04
ACTN1-220ENST00000556433 SCYL3Q8IZE3 742 aa27.8■■■□□ 2.04
ACTN1-220ENST00000556433 PICK1Q9NRD5 415 aa27.8■■■□□ 2.04
ACTN1-220ENST00000556433 ZBTB7BO15156 539 aaPredicted RBP27.79■■■□□ 2.04
ACTN1-220ENST00000556433 SLURP2P0DP57 97 aa27.79■■■□□ 2.04
ACTN1-220ENST00000556433 RLBP1P12271 317 aa27.79■■■□□ 2.04
ACTN1-220ENST00000556433 LACTBP83111 547 aaPredicted RBP27.79■■■□□ 2.04
ACTN1-220ENST00000556433 TNNI3KQ59H18 835 aa27.79■■■□□ 2.04
ACTN1-220ENST00000556433 LRP2BPQ9P2M1 347 aa27.79■■■□□ 2.04
ACTN1-220ENST00000556433 ZHX2Q9Y6X8 837 aa27.79■■■□□ 2.04
ACTN1-220ENST00000556433 FPGT-TNNI3KV9GXZ4 949 aa27.79■■■□□ 2.04
ACTN1-220ENST00000556433 POTEFA5A3E0 1075 aa27.78■■■□□ 2.04
ACTN1-220ENST00000556433 MOGSQ13724 837 aa27.78■■■□□ 2.04
ACTN1-220ENST00000556433 CCDC158Q5M9N0 1113 aa27.78■■■□□ 2.04
ACTN1-220ENST00000556433 TTC39AQ5SRH9 613 aa27.78■■■□□ 2.04
ACTN1-220ENST00000556433 C17orf99Q6UX52 265 aa27.78■■■□□ 2.04
ACTN1-220ENST00000556433 DBNDD2Q9BQY9 259 aa27.78■■■□□ 2.04
ACTN1-220ENST00000556433 ARHGAP39Q9C0H5 1083 aa27.78■■■□□ 2.04
ACTN1-220ENST00000556433 SNRKQ9NRH2 765 aa27.78■■■□□ 2.04
ACTN1-220ENST00000556433 CPA4Q9UI42 421 aa27.78■■■□□ 2.04
ACTN1-220ENST00000556433 PTCH2Q9Y6C5 1203 aa27.78■■■□□ 2.04
ACTN1-220ENST00000556433 NPM3O75607 178 aaKnown RBP27.77■■■□□ 2.04
ACTN1-220ENST00000556433 MAP4K4O95819 1239 aaPredicted RBP27.77■■■□□ 2.04
ACTN1-220ENST00000556433 PTPRAP18433 802 aa27.77■■■□□ 2.04
ACTN1-220ENST00000556433 TNRC18O15417 2968 aaPredicted RBP27.75■■■□□ 2.03
ACTN1-220ENST00000556433 CTNND1O60716 968 aaKnown RBP27.75■■■□□ 2.03
ACTN1-220ENST00000556433 ECM2O94769 699 aaPredicted RBP27.75■■■□□ 2.03
ACTN1-220ENST00000556433 SLC9C1Q4G0N8 1177 aa27.75■■■□□ 2.03
ACTN1-220ENST00000556433 NBPF11Q86T75 865 aa27.75■■■□□ 2.03
ACTN1-220ENST00000556433 NOP58Q9Y2X3 529 aaKnown RBP27.75■■■□□ 2.03
ACTN1-220ENST00000556433 ZBED9Q6R2W3 1325 aa27.74■■■□□ 2.03
ACTN1-220ENST00000556433 GPAT2Q6NUI2 795 aa27.74■■■□□ 2.03
ACTN1-220ENST00000556433 AFG3L2Q9Y4W6 797 aa27.74■■■□□ 2.03
ACTN1-220ENST00000556433 TBC1D12O60347 775 aa27.73■■■□□ 2.03
ACTN1-220ENST00000556433 GNRH1P01148 92 aa27.73■■■□□ 2.03
ACTN1-220ENST00000556433 FASTKD5Q7L8L6 764 aaKnown RBP27.73■■■□□ 2.03
ACTN1-220ENST00000556433 TEX11Q8IYF3 940 aa27.73■■■□□ 2.03
ACTN1-220ENST00000556433 ZNF333Q96JL9 665 aa27.73■■■□□ 2.03
ACTN1-220ENST00000556433 NOL10Q9BSC4 688 aaKnown RBP27.73■■■□□ 2.03
ACTN1-220ENST00000556433 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.73■■■□□ 2.036e-7■■■■■ 31.5
ACTN1-220ENST00000556433 A0A0G2JLL6 359 aaPredicted RBP27.72■■■□□ 2.03
ACTN1-220ENST00000556433 NAA16Q6N069 864 aaPredicted RBP27.72■■■□□ 2.03
ACTN1-220ENST00000556433 PRRT2Q7Z6L0 340 aaPredicted RBP27.72■■■□□ 2.03
ACTN1-220ENST00000556433 PARK7Q99497 189 aaKnown RBP27.72■■■□□ 2.03
ACTN1-220ENST00000556433 TMEM106CQ9BVX2 250 aa27.72■■■□□ 2.03
ACTN1-220ENST00000556433 KIAA0100Q14667 2235 aaKnown RBP27.72■■■□□ 2.03
ACTN1-220ENST00000556433 DOCK2Q92608 1830 aa27.71■■■□□ 2.03
ACTN1-220ENST00000556433 ADGRA2Q96PE1 1338 aa27.71■■■□□ 2.03
ACTN1-220ENST00000556433 PSMC4P43686 418 aa27.71■■■□□ 2.03
ACTN1-220ENST00000556433 PRPF38BQ5VTL8 546 aaKnown RBP27.71■■■□□ 2.03
ACTN1-220ENST00000556433 GADL1Q6ZQY3 521 aa27.71■■■□□ 2.03
ACTN1-220ENST00000556433 SH3RF3Q8TEJ3 882 aaPredicted RBP27.71■■■□□ 2.03
ACTN1-220ENST00000556433 OSBPL5Q9H0X9 879 aaPredicted RBP27.71■■■□□ 2.03
ACTN1-220ENST00000556433 FAM196BA6NMK8 535 aa27.7■■■□□ 2.02
ACTN1-220ENST00000556433 BAG3O95817 575 aa27.7■■■□□ 2.02
ACTN1-220ENST00000556433 CYP2E1P05181 493 aaPredicted RBP27.7■■■□□ 2.02
ACTN1-220ENST00000556433 CYP2C8P10632 490 aa27.7■■■□□ 2.02
ACTN1-220ENST00000556433 EN2P19622 333 aaPredicted RBP27.7■■■□□ 2.02
ACTN1-220ENST00000556433 PRMT2P55345 433 aa27.7■■■□□ 2.02
ACTN1-220ENST00000556433 ZNF512BQ96KM6 892 aaPredicted RBP27.7■■■□□ 2.02
ACTN1-220ENST00000556433 CCDC8Q9H0W5 538 aaPredicted RBP27.7■■■□□ 2.02
ACTN1-220ENST00000556433 FMNL1O95466 1100 aaPredicted RBP27.69■■■□□ 2.02
ACTN1-220ENST00000556433 CTGFP29279 349 aa27.69■■■□□ 2.02
ACTN1-220ENST00000556433 PANK1Q8TE04 598 aa27.69■■■□□ 2.02
ACTN1-220ENST00000556433 AATFQ9NY61 560 aaKnown RBP eCLIP27.69■■■□□ 2.02
ACTN1-220ENST00000556433 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.69■■■□□ 2.02
ACTN1-220ENST00000556433 DBNLQ9UJU6 430 aaKnown RBP27.69■■■□□ 2.02
ACTN1-220ENST00000556433 TRIM75PA6NK02 468 aa27.68■■■□□ 2.02
ACTN1-220ENST00000556433 HOXD10P28358 340 aa27.68■■■□□ 2.02
ACTN1-220ENST00000556433 ZAP70P43403 619 aa27.68■■■□□ 2.02
ACTN1-220ENST00000556433 CEP85Q6P2H3 762 aa27.68■■■□□ 2.02
ACTN1-220ENST00000556433 CCDC84Q86UT8 332 aaPredicted RBP27.68■■■□□ 2.02
ACTN1-220ENST00000556433 SH3TC2Q8TF17 1288 aa27.68■■■□□ 2.02
ACTN1-220ENST00000556433 EAF2Q96CJ1 260 aaPredicted RBP27.68■■■□□ 2.02
ACTN1-220ENST00000556433 TRIM47Q96LD4 638 aa27.68■■■□□ 2.02
ACTN1-220ENST00000556433 HTTP42858 3142 aa27.68■■■□□ 2.02
ACTN1-220ENST00000556433 MYCP01106 439 aaPredicted RBP27.67■■■□□ 2.02
ACTN1-220ENST00000556433 SLC4A8Q2Y0W8 1093 aa27.67■■■□□ 2.02
ACTN1-220ENST00000556433 TLR7Q9NYK1 1049 aaKnown RBP27.67■■■□□ 2.02
ACTN1-220ENST00000556433 SRRDQ9UH36 339 aa27.67■■■□□ 2.02
ACTN1-220ENST00000556433 BCRP11274 1271 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms