RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 MOGSQ13724 837 aa21.47■■□□□ 1.03
CHMP1A-205ENST00000548650 POLA2Q14181 598 aa21.47■■□□□ 1.03
CHMP1A-205ENST00000548650 ATAD5Q96QE3 1844 aa21.47■■□□□ 1.03
CHMP1A-205ENST00000548650 COL2A1P02458 1487 aaPredicted RBP21.46■■□□□ 1.03
CHMP1A-205ENST00000548650 FOCADQ5VW36 1801 aa21.46■■□□□ 1.03
CHMP1A-205ENST00000548650 PHF20L1A8MW92 1017 aa21.46■■□□□ 1.03
CHMP1A-205ENST00000548650 RHBDL3P58872 404 aa21.46■■□□□ 1.03
CHMP1A-205ENST00000548650 G3BP1Q13283 466 aaKnown RBP eCLIP21.46■■□□□ 1.03
CHMP1A-205ENST00000548650 ERICH6Q7L0X2 663 aa21.46■■□□□ 1.03
CHMP1A-205ENST00000548650 ANKRD23Q86SG2 305 aa21.46■■□□□ 1.03
CHMP1A-205ENST00000548650 ADGRA2Q96PE1 1338 aa21.46■■□□□ 1.03
CHMP1A-205ENST00000548650 SIPA1L1O43166 1804 aa21.45■■□□□ 1.03
CHMP1A-205ENST00000548650 GPR75-ASB3A0A0A6YYF3 556 aa21.45■■□□□ 1.02
CHMP1A-205ENST00000548650 DDTLA6NHG4 134 aaPredicted RBP21.45■■□□□ 1.02
CHMP1A-205ENST00000548650 MCAMP43121 646 aa21.45■■□□□ 1.02
CHMP1A-205ENST00000548650 PICALMQ13492 652 aa21.45■■□□□ 1.02
CHMP1A-205ENST00000548650 GORABQ5T7V8 394 aa21.45■■□□□ 1.02
CHMP1A-205ENST00000548650 SSH3Q8TE77 659 aa21.45■■□□□ 1.02
CHMP1A-205ENST00000548650 NSUN4Q96CB9 384 aaKnown RBP21.45■■□□□ 1.02
CHMP1A-205ENST00000548650 ARHGAP39Q9C0H5 1083 aa21.45■■□□□ 1.02
CHMP1A-205ENST00000548650 C1orf115Q9H7X2 142 aa21.45■■□□□ 1.02
CHMP1A-205ENST00000548650 BRCA2P51587 3418 aa21.45■■□□□ 1.02
CHMP1A-205ENST00000548650 POTEFA5A3E0 1075 aa21.44■■□□□ 1.02
CHMP1A-205ENST00000548650 RLBP1P12271 317 aa21.44■■□□□ 1.02
CHMP1A-205ENST00000548650 LACTBP83111 547 aaPredicted RBP21.44■■□□□ 1.02
CHMP1A-205ENST00000548650 MAP3K10Q02779 954 aa21.44■■□□□ 1.02
CHMP1A-205ENST00000548650 DIEXFQ68CQ4 756 aaKnown RBP21.44■■□□□ 1.02
CHMP1A-205ENST00000548650 TBC1D9Q6ZT07 1266 aa21.44■■□□□ 1.02
CHMP1A-205ENST00000548650 SCYL3Q8IZE3 742 aa21.44■■□□□ 1.02
CHMP1A-205ENST00000548650 PTCH2Q9Y6C5 1203 aa21.44■■□□□ 1.02
CHMP1A-205ENST00000548650 MGAMO43451 1857 aa21.43■■□□□ 1.02
CHMP1A-205ENST00000548650 SLURP2P0DP57 97 aa21.43■■□□□ 1.02
CHMP1A-205ENST00000548650 ZSCAN29Q8IWY8 852 aaPredicted RBP21.43■■□□□ 1.02
CHMP1A-205ENST00000548650 FTSJ3Q8IY81 847 aaKnown RBP21.43■■□□□ 1.02
CHMP1A-205ENST00000548650 GPR108Q9NPR9 543 aa21.43■■□□□ 1.02
CHMP1A-205ENST00000548650 LOC285556D6RIA3 1793 aa21.43■■□□□ 1.02
CHMP1A-205ENST00000548650 PDHXO00330 501 aa21.42■■□□□ 1.02
CHMP1A-205ENST00000548650 NPM3O75607 178 aaKnown RBP21.42■■□□□ 1.02
CHMP1A-205ENST00000548650 UQCRFS1P1P0C7P4 283 aa21.42■■□□□ 1.02
CHMP1A-205ENST00000548650 ARHGEF6Q15052 776 aa21.42■■□□□ 1.02
CHMP1A-205ENST00000548650 TNNI3KQ59H18 835 aa21.42■■□□□ 1.02
CHMP1A-205ENST00000548650 PRPF38BQ5VTL8 546 aaKnown RBP21.42■■□□□ 1.02
CHMP1A-205ENST00000548650 ZBED9Q6R2W3 1325 aa21.42■■□□□ 1.02
CHMP1A-205ENST00000548650 C17orf99Q6UX52 265 aa21.42■■□□□ 1.02
CHMP1A-205ENST00000548650 ZNF333Q96JL9 665 aa21.42■■□□□ 1.02
CHMP1A-205ENST00000548650 FPGT-TNNI3KV9GXZ4 949 aa21.42■■□□□ 1.02
CHMP1A-205ENST00000548650 CXCL11O14625 94 aa21.41■■□□□ 1.02
CHMP1A-205ENST00000548650 SLC34A2O95436 690 aa21.41■■□□□ 1.02
CHMP1A-205ENST00000548650 GSTO1P78417 241 aa21.41■■□□□ 1.02
CHMP1A-205ENST00000548650 ATP8B2P98198 1209 aa21.41■■□□□ 1.02
CHMP1A-205ENST00000548650 ITPRIPQ8IWB1 547 aa21.41■■□□□ 1.02
CHMP1A-205ENST00000548650 DBNDD2Q9BQY9 259 aa21.41■■□□□ 1.02
CHMP1A-205ENST00000548650 RAI14Q9P0K7 980 aa21.41■■□□□ 1.02
CHMP1A-205ENST00000548650 CPA4Q9UI42 421 aa21.41■■□□□ 1.02
CHMP1A-205ENST00000548650 PTPRAP18433 802 aa21.4■■□□□ 1.02
CHMP1A-205ENST00000548650 GPAT2Q6NUI2 795 aa21.4■■□□□ 1.02
CHMP1A-205ENST00000548650 PICK1Q9NRD5 415 aa21.4■■□□□ 1.02
CHMP1A-205ENST00000548650 ZHX2Q9Y6X8 837 aa21.4■■□□□ 1.02
CHMP1A-205ENST00000548650 MKI67P46013 3256 aaKnown RBP21.39■■□□□ 1.02
CHMP1A-205ENST00000548650 A0A0G2JLL6 359 aaPredicted RBP21.39■■□□□ 1.01
CHMP1A-205ENST00000548650 MAP4K4O95819 1239 aaPredicted RBP21.39■■□□□ 1.01
CHMP1A-205ENST00000548650 LDHCP07864 332 aa21.39■■□□□ 1.01
CHMP1A-205ENST00000548650 CTGFP29279 349 aa21.39■■□□□ 1.01
CHMP1A-205ENST00000548650 OS9Q13438 667 aaPredicted RBP21.39■■□□□ 1.01
CHMP1A-205ENST00000548650 KIF22Q14807 665 aa21.39■■□□□ 1.01
CHMP1A-205ENST00000548650 SLC9C1Q4G0N8 1177 aa21.39■■□□□ 1.01
CHMP1A-205ENST00000548650 PRRT2Q7Z6L0 340 aaPredicted RBP21.39■■□□□ 1.01
CHMP1A-205ENST00000548650 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.39■■□□□ 1.01
CHMP1A-205ENST00000548650 FAM196BA6NMK8 535 aa21.38■■□□□ 1.01
CHMP1A-205ENST00000548650 ZBTB7BO15156 539 aaPredicted RBP21.38■■□□□ 1.01
CHMP1A-205ENST00000548650 SURF6O75683 361 aaKnown RBP21.38■■□□□ 1.01
CHMP1A-205ENST00000548650 GNRH1P01148 92 aa21.38■■□□□ 1.01
CHMP1A-205ENST00000548650 PARK7Q99497 189 aaKnown RBP21.38■■□□□ 1.01
CHMP1A-205ENST00000548650 OSBPL5Q9H0X9 879 aaPredicted RBP21.38■■□□□ 1.01
CHMP1A-205ENST00000548650 SNRKQ9NRH2 765 aa21.38■■□□□ 1.01
CHMP1A-205ENST00000548650 NOP58Q9Y2X3 529 aaKnown RBP21.38■■□□□ 1.01
CHMP1A-205ENST00000548650 AFG3L2Q9Y4W6 797 aa21.38■■□□□ 1.01
CHMP1A-205ENST00000548650 TBC1D12O60347 775 aa21.37■■□□□ 1.01
CHMP1A-205ENST00000548650 CTNND1O60716 968 aaKnown RBP21.37■■□□□ 1.01
CHMP1A-205ENST00000548650 TTC39AQ5SRH9 613 aa21.37■■□□□ 1.01
CHMP1A-205ENST00000548650 TRIM47Q96LD4 638 aa21.37■■□□□ 1.01
CHMP1A-205ENST00000548650 LRP2BPQ9P2M1 347 aa21.37■■□□□ 1.01
CHMP1A-205ENST00000548650 DBNLQ9UJU6 430 aaKnown RBP21.37■■□□□ 1.01
CHMP1A-205ENST00000548650 CYP2C8P10632 490 aa21.36■■□□□ 1.01
CHMP1A-205ENST00000548650 BCRP11274 1271 aa21.36■■□□□ 1.01
CHMP1A-205ENST00000548650 CCDC84Q86UT8 332 aaPredicted RBP21.36■■□□□ 1.01
CHMP1A-205ENST00000548650 ZNF512BQ96KM6 892 aaPredicted RBP21.36■■□□□ 1.01
CHMP1A-205ENST00000548650 TLR7Q9NYK1 1049 aaKnown RBP21.36■■□□□ 1.01
CHMP1A-205ENST00000548650 ECM2O94769 699 aaPredicted RBP21.35■■□□□ 1.01
CHMP1A-205ENST00000548650 CYP2E1P05181 493 aaPredicted RBP21.35■■□□□ 1.01
CHMP1A-205ENST00000548650 PRMT2P55345 433 aa21.35■■□□□ 1.01
CHMP1A-205ENST00000548650 CCDC158Q5M9N0 1113 aa21.35■■□□□ 1.01
CHMP1A-205ENST00000548650 CEP85Q6P2H3 762 aa21.35■■□□□ 1.01
CHMP1A-205ENST00000548650 FASTKD5Q7L8L6 764 aaKnown RBP21.35■■□□□ 1.01
CHMP1A-205ENST00000548650 ADGRA1Q86SQ6 560 aa21.35■■□□□ 1.01
CHMP1A-205ENST00000548650 TEX11Q8IYF3 940 aa21.35■■□□□ 1.01
CHMP1A-205ENST00000548650 SH3RF3Q8TEJ3 882 aaPredicted RBP21.35■■□□□ 1.01
CHMP1A-205ENST00000548650 SH3TC2Q8TF17 1288 aa21.35■■□□□ 1.01
CHMP1A-205ENST00000548650 EN2P19622 333 aaPredicted RBP21.34■■□□□ 1.01
CHMP1A-205ENST00000548650 PSMC4P43686 418 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms