RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ZNF76P36508 570 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 TRAF1Q13077 416 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 MMS22LQ6ZRQ5 1243 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 RAB11FIP4Q86YS3 637 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 NOX5Q96PH1 765 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 ACTR5Q9H9F9 607 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-212ENST00000546744 SAR1BQ9Y6B6 198 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 RTL9Q8NET4 1388 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 HIP1RO75146 1068 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 VIMP08670 466 aaKnown RBP14.36□□□□□ -0.11
PTCH1-212ENST00000546744 SIRT1Q96EB6 747 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 IQGAP1P46940 1657 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 PPP2R5BQ15173 497 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 SNCBQ16143 134 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 GKAP1Q5VSY0 366 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-212ENST00000546744 FYB2Q5VWT5 728 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 CLEC17AQ6ZS10 378 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 RNF10Q8N5U6 811 aaKnown RBP14.36□□□□□ -0.11
PTCH1-212ENST00000546744 ERMNQ8TAM6 284 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 MICAL1Q8TDZ2 1067 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 ESR2Q92731 530 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 SPATA31D1Q6ZQQ2 1576 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 ATP2A2P16615 1042 aaKnown RBP14.35□□□□□ -0.11
PTCH1-212ENST00000546744 MARCKSP29966 332 aaPredicted RBP14.35□□□□□ -0.11
PTCH1-212ENST00000546744 AFMP43652 599 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 GRIPAP1Q4V328 841 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 ZNF365Q70YC5 407 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 MMRN2Q9H8L6 949 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 EHMT1Q9H9B1 1298 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 PPLO60437 1756 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 TCP1P17987 556 aaKnown RBP14.35□□□□□ -0.11
PTCH1-212ENST00000546744 NMIQ13287 307 aaPredicted RBP14.35□□□□□ -0.11
PTCH1-212ENST00000546744 TCERG1LQ5VWI1 586 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 ADALQ6DHV7 355 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 SRGAP1Q7Z6B7 1085 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 SNX14Q9Y5W7 946 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 PI4KAP2A4QPH2 592 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 BICDL1Q6ZP65 573 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 CCDC84Q86UT8 332 aaPredicted RBP14.35□□□□□ -0.11
PTCH1-212ENST00000546744 PI4KAP1Q8N8J0 262 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 TRIM58Q8NG06 486 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 GPT2Q8TD30 523 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 TSNARE1Q96NA8 513 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 CSRNP2Q9H175 543 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 ZRANB1Q9UGI0 708 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 CDC23Q9UJX2 597 aa14.35□□□□□ -0.11
PTCH1-212ENST00000546744 PRC1O43663 620 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 IL15P40933 162 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-212ENST00000546744 PHLDB3Q6NSJ2 640 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 C16orf71Q8IYS4 520 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-212ENST00000546744 HELLSQ9NRZ9 838 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 PARP2Q9UGN5 583 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 KCNH3Q9ULD8 1083 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 EMILIN1Q9Y6C2 1016 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 PDE4BQ07343 736 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 SND1Q7KZF4 910 aaKnown RBP eCLIP14.34□□□□□ -0.11
PTCH1-212ENST00000546744 PNMA8AQ86V59 439 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-212ENST00000546744 MYD88Q99836 296 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 KIAA1468Q9P260 1216 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 GADD45BO75293 160 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-212ENST00000546744 GNAT2P19087 354 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 FBLN1P23142 703 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 GNGT1P63211 74 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 CAVIN4Q5BKX8 364 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 LINS1Q8NG48 757 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 UBLCP1Q8WVY7 318 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-212ENST00000546744 DHX58Q96C10 678 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 ANAPC4Q9UJX5 808 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 FBXO18Q8NFZ0 1043 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 XPO4Q9C0E2 1151 aaKnown RBP14.34□□□□□ -0.11
PTCH1-212ENST00000546744 MKNK2Q9HBH9 465 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 CWC25Q9NXE8 425 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-212ENST00000546744 PHF8Q9UPP1 1060 aa14.34□□□□□ -0.11
PTCH1-212ENST00000546744 UTP11Q9Y3A2 253 aaKnown RBP14.34□□□□□ -0.11
PTCH1-212ENST00000546744 TMEM131LA2VDJ0 1609 aa14.33□□□□□ -0.11
PTCH1-212ENST00000546744 A0A1B0GVL5 298 aa14.33□□□□□ -0.12
PTCH1-212ENST00000546744 MINDY4BA8MYZ0 360 aa14.33□□□□□ -0.12
PTCH1-212ENST00000546744 RNF40O75150 1001 aa14.33□□□□□ -0.12
PTCH1-212ENST00000546744 CUL4AQ13619 759 aa14.33□□□□□ -0.12
PTCH1-212ENST00000546744 TSHZ3Q63HK5 1081 aa14.33□□□□□ -0.12
PTCH1-212ENST00000546744 BAIAP2L1Q9UHR4 511 aa14.33□□□□□ -0.12
PTCH1-212ENST00000546744 NFE2L3Q9Y4A8 694 aa14.33□□□□□ -0.12
PTCH1-212ENST00000546744 RANBP6O60518 1105 aaKnown RBP14.33□□□□□ -0.12
PTCH1-212ENST00000546744 ZNF202O95125 648 aa14.33□□□□□ -0.12
PTCH1-212ENST00000546744 VSIG1Q86XK7 387 aa14.33□□□□□ -0.12
PTCH1-212ENST00000546744 HOMER3Q9NSC5 361 aa14.33□□□□□ -0.12
PTCH1-212ENST00000546744 STARD3NLO95772 234 aa14.33□□□□□ -0.12
PTCH1-212ENST00000546744 HMGB2P26583 209 aaKnown RBP14.33□□□□□ -0.12
PTCH1-212ENST00000546744 TMEM132AQ24JP5 1023 aa14.33□□□□□ -0.12
PTCH1-212ENST00000546744 BCAP29Q9UHQ4 241 aa14.33□□□□□ -0.12
PTCH1-212ENST00000546744 QRICH2Q9H0J4 1663 aa14.33□□□□□ -0.12
PTCH1-212ENST00000546744 SYNRGQ9UMZ2 1314 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 GRM8O00222 908 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 KRT9P35527 623 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 ASIC1P78348 528 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 TMEM87BQ96K49 555 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 SEC62Q99442 399 aaKnown RBP14.32□□□□□ -0.12
PTCH1-212ENST00000546744 PPP2R2CQ9Y2T4 447 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 MAP3K2Q9Y2U5 619 aa14.32□□□□□ -0.12
PTCH1-212ENST00000546744 PLCD1P51178 756 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms