RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 BTDP43251 543 aa23.08■■□□□ 1.29
CHERP-204ENST00000546538 LACTBP83111 547 aaPredicted RBP23.08■■□□□ 1.29
CHERP-204ENST00000546538 C17orf99Q6UX52 265 aa23.08■■□□□ 1.29
CHERP-204ENST00000546538 MIER1Q8N108 512 aa23.08■■□□□ 1.29
CHERP-204ENST00000546538 NEUROD6Q96NK8 337 aa23.08■■□□□ 1.29
CHERP-204ENST00000546538 GPAT2Q6NUI2 795 aa23.08■■□□□ 1.28
CHERP-204ENST00000546538 ANKRD23Q86SG2 305 aa23.08■■□□□ 1.28
CHERP-204ENST00000546538 ZNF333Q96JL9 665 aa23.08■■□□□ 1.28
CHERP-204ENST00000546538 PHIPQ8WWQ0 1821 aa23.07■■□□□ 1.28
CHERP-204ENST00000546538 GPR75-ASB3A0A0A6YYF3 556 aa23.07■■□□□ 1.28
CHERP-204ENST00000546538 ARID4AP29374 1257 aaPredicted RBP23.07■■□□□ 1.28
CHERP-204ENST00000546538 MCAMP43121 646 aa23.07■■□□□ 1.28
CHERP-204ENST00000546538 POLA2Q14181 598 aa23.07■■□□□ 1.28
CHERP-204ENST00000546538 PRPF38BQ5VTL8 546 aaKnown RBP23.07■■□□□ 1.28
CHERP-204ENST00000546538 SPATA5Q8NB90 893 aa23.07■■□□□ 1.28
CHERP-204ENST00000546538 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.07■■□□□ 1.28
CHERP-204ENST00000546538 PTPRFP10586 1907 aa23.06■■□□□ 1.28
CHERP-204ENST00000546538 PDHXO00330 501 aa23.06■■□□□ 1.28
CHERP-204ENST00000546538 RLBP1P12271 317 aa23.06■■□□□ 1.28
CHERP-204ENST00000546538 NSUN4Q96CB9 384 aaKnown RBP23.06■■□□□ 1.28
CHERP-204ENST00000546538 CPA4Q9UI42 421 aa23.06■■□□□ 1.28
CHERP-204ENST00000546538 EN2P19622 333 aaPredicted RBP23.05■■□□□ 1.28
CHERP-204ENST00000546538 PICALMQ13492 652 aa23.05■■□□□ 1.28
CHERP-204ENST00000546538 ZKSCAN2Q63HK3 967 aa23.05■■□□□ 1.28
CHERP-204ENST00000546538 ERICH6Q7L0X2 663 aa23.05■■□□□ 1.28
CHERP-204ENST00000546538 C1orf115Q9H7X2 142 aa23.05■■□□□ 1.28
CHERP-204ENST00000546538 DOCK1Q14185 1865 aa23.04■■□□□ 1.28
CHERP-204ENST00000546538 ECM2O94769 699 aaPredicted RBP23.04■■□□□ 1.28
CHERP-204ENST00000546538 SPTY2D1Q68D10 685 aaPredicted RBP23.04■■□□□ 1.28
CHERP-204ENST00000546538 SCYL3Q8IZE3 742 aa23.04■■□□□ 1.28
CHERP-204ENST00000546538 PTPRAP18433 802 aa23.03■■□□□ 1.28
CHERP-204ENST00000546538 HNRNPUQ00839 825 aaKnown RBP eCLIP23.03■■□□□ 1.28
CHERP-204ENST00000546538 CCDC84Q86UT8 332 aaPredicted RBP23.03■■□□□ 1.28
CHERP-204ENST00000546538 SSH3Q8TE77 659 aa23.03■■□□□ 1.28
CHERP-204ENST00000546538 FAM196BA6NMK8 535 aa23.02■■□□□ 1.28
CHERP-204ENST00000546538 G3BP1Q13283 466 aaKnown RBP eCLIP23.02■■□□□ 1.28
CHERP-204ENST00000546538 ZSCAN29Q8IWY8 852 aaPredicted RBP23.02■■□□□ 1.28
CHERP-204ENST00000546538 SH3TC2Q8TF17 1288 aa23.02■■□□□ 1.28
CHERP-204ENST00000546538 TRIM47Q96LD4 638 aa23.02■■□□□ 1.28
CHERP-204ENST00000546538 AFG3L2Q9Y4W6 797 aa23.02■■□□□ 1.28
CHERP-204ENST00000546538 ZHX2Q9Y6X8 837 aa23.02■■□□□ 1.28
CHERP-204ENST00000546538 A0A0G2JLL6 359 aaPredicted RBP23.01■■□□□ 1.27
CHERP-204ENST00000546538 CXCL11O14625 94 aa23.01■■□□□ 1.27
CHERP-204ENST00000546538 CYP2C8P10632 490 aa23.01■■□□□ 1.27
CHERP-204ENST00000546538 SLC9C1Q4G0N8 1177 aa23.01■■□□□ 1.27
CHERP-204ENST00000546538 PRRT2Q7Z6L0 340 aaPredicted RBP23.01■■□□□ 1.27
CHERP-204ENST00000546538 SLF2Q8IX21 1173 aa23.01■■□□□ 1.27
CHERP-204ENST00000546538 MYO5AQ9Y4I1 1855 aaKnown RBP23.01■■□□□ 1.27
CHERP-204ENST00000546538 SIPA1L1O43166 1804 aa23.01■■□□□ 1.27
CHERP-204ENST00000546538 ATP8B2P98198 1209 aa23■■□□□ 1.27
CHERP-204ENST00000546538 RRP1BQ14684 758 aaKnown RBP23■■□□□ 1.27
CHERP-204ENST00000546538 TNNI3KQ59H18 835 aa23■■□□□ 1.27
CHERP-204ENST00000546538 DBNDD2Q9BQY9 259 aa23■■□□□ 1.27
CHERP-204ENST00000546538 FPGT-TNNI3KV9GXZ4 949 aa23■■□□□ 1.27
CHERP-204ENST00000546538 NPM3O75607 178 aaKnown RBP22.99■■□□□ 1.27
CHERP-204ENST00000546538 BCRP11274 1271 aa22.99■■□□□ 1.27
CHERP-204ENST00000546538 GORABQ5T7V8 394 aa22.99■■□□□ 1.27
CHERP-204ENST00000546538 SNRKQ9NRH2 765 aa22.99■■□□□ 1.27
CHERP-204ENST00000546538 ZBTB7BO15156 539 aaPredicted RBP22.99■■□□□ 1.27
CHERP-204ENST00000546538 MYCP01106 439 aaPredicted RBP22.99■■□□□ 1.27
CHERP-204ENST00000546538 ADGRA1Q86SQ6 560 aa22.99■■□□□ 1.27
CHERP-204ENST00000546538 GPR108Q9NPR9 543 aa22.99■■□□□ 1.27
CHERP-204ENST00000546538 RAI14Q9P0K7 980 aa22.99■■□□□ 1.27
CHERP-204ENST00000546538 MAST2Q6P0Q8 1798 aa22.98■■□□□ 1.27
CHERP-204ENST00000546538 COL2A1P02458 1487 aaPredicted RBP22.98■■□□□ 1.27
CHERP-204ENST00000546538 CTNND1O60716 968 aaKnown RBP22.98■■□□□ 1.27
CHERP-204ENST00000546538 PSMC4P43686 418 aa22.98■■□□□ 1.27
CHERP-204ENST00000546538 ARHGEF6Q15052 776 aa22.98■■□□□ 1.27
CHERP-204ENST00000546538 PICK1Q9NRD5 415 aa22.98■■□□□ 1.27
CHERP-204ENST00000546538 TLR7Q9NYK1 1049 aaKnown RBP22.98■■□□□ 1.27
CHERP-204ENST00000546538 CDK5RAP2Q96SN8 1893 aa22.97■■□□□ 1.27
CHERP-204ENST00000546538 TBC1D12O60347 775 aa22.97■■□□□ 1.27
CHERP-204ENST00000546538 UQCRFS1P1P0C7P4 283 aa22.97■■□□□ 1.27
CHERP-204ENST00000546538 OSBPP22059 807 aa22.97■■□□□ 1.27
CHERP-204ENST00000546538 SH3RF3Q8TEJ3 882 aaPredicted RBP22.97■■□□□ 1.27
CHERP-204ENST00000546538 OSBPL5Q9H0X9 879 aaPredicted RBP22.97■■□□□ 1.27
CHERP-204ENST00000546538 SRRDQ9UH36 339 aa22.97■■□□□ 1.27
CHERP-204ENST00000546538 NOP58Q9Y2X3 529 aaKnown RBP22.97■■□□□ 1.27
CHERP-204ENST00000546538 MGAMO43451 1857 aa22.96■■□□□ 1.27
CHERP-204ENST00000546538 GNRH1P01148 92 aa22.96■■□□□ 1.27
CHERP-204ENST00000546538 CYP2E1P05181 493 aaPredicted RBP22.96■■□□□ 1.27
CHERP-204ENST00000546538 GSTO1P78417 241 aa22.96■■□□□ 1.27
CHERP-204ENST00000546538 KIF22Q14807 665 aa22.96■■□□□ 1.27
CHERP-204ENST00000546538 PARK7Q99497 189 aaKnown RBP22.96■■□□□ 1.27
CHERP-204ENST00000546538 DBNLQ9UJU6 430 aaKnown RBP22.96■■□□□ 1.27
CHERP-204ENST00000546538 ATAD5Q96QE3 1844 aa22.95■■□□□ 1.26
CHERP-204ENST00000546538 SURF6O75683 361 aaKnown RBP22.95■■□□□ 1.26
CHERP-204ENST00000546538 TRIM75PA6NK02 468 aa22.94■■□□□ 1.26
CHERP-204ENST00000546538 LDHCP07864 332 aa22.94■■□□□ 1.26
CHERP-204ENST00000546538 MTFR1Q15390 333 aa22.94■■□□□ 1.26
CHERP-204ENST00000546538 GADL1Q6ZQY3 521 aa22.94■■□□□ 1.26
CHERP-204ENST00000546538 NBPF11Q86T75 865 aa22.94■■□□□ 1.26
CHERP-204ENST00000546538 ITPRIPQ8IWB1 547 aa22.94■■□□□ 1.26
CHERP-204ENST00000546538 PIH1D3Q9NQM4 214 aaKnown RBP22.94■■□□□ 1.26
CHERP-204ENST00000546538 LRP2BPQ9P2M1 347 aa22.94■■□□□ 1.26
CHERP-204ENST00000546538 MAP4K4O95819 1239 aaPredicted RBP22.93■■□□□ 1.26
CHERP-204ENST00000546538 TTC39AQ5SRH9 613 aa22.93■■□□□ 1.26
CHERP-204ENST00000546538 TREML2Q5T2D2 321 aa22.93■■□□□ 1.26
CHERP-204ENST00000546538 FASTKD5Q7L8L6 764 aaKnown RBP22.93■■□□□ 1.26
CHERP-204ENST00000546538 TEX11Q8IYF3 940 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms