RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 ZNF384Q8TF68 577 aa20.11■□□□□ 0.81
TRIM65-203ENST00000540812 FAM163AQ96GL9 167 aaPredicted RBP20.11■□□□□ 0.81
TRIM65-203ENST00000540812 TRIM47Q96LD4 638 aa20.11■□□□□ 0.81
TRIM65-203ENST00000540812 AKAP2Q9Y2D5 859 aa20.11■□□□□ 0.81
TRIM65-203ENST00000540812 MROH7-TTC4A0A0A0MT08 1334 aa20.1■□□□□ 0.81
TRIM65-203ENST00000540812 CXCL11O14625 94 aa20.1■□□□□ 0.81
TRIM65-203ENST00000540812 BCAR3O75815 825 aa20.1■□□□□ 0.81
TRIM65-203ENST00000540812 GNRH1P01148 92 aa20.1■□□□□ 0.81
TRIM65-203ENST00000540812 PICALMQ13492 652 aa20.1■□□□□ 0.81
TRIM65-203ENST00000540812 MVPQ14764 893 aaKnown RBP20.1■□□□□ 0.81
TRIM65-203ENST00000540812 SPTY2D1Q68D10 685 aaPredicted RBP20.1■□□□□ 0.81
TRIM65-203ENST00000540812 ZSCAN29Q8IWY8 852 aaPredicted RBP20.1■□□□□ 0.81
TRIM65-203ENST00000540812 SCYL3Q8IZE3 742 aa20.1■□□□□ 0.81
TRIM65-203ENST00000540812 NEUROD6Q96NK8 337 aa20.1■□□□□ 0.81
TRIM65-203ENST00000540812 ZHX2Q9Y6X8 837 aa20.1■□□□□ 0.81
TRIM65-203ENST00000540812 DOCK2Q92608 1830 aa20.1■□□□□ 0.81
TRIM65-203ENST00000540812 CYP2C8P10632 490 aa20.09■□□□□ 0.81
TRIM65-203ENST00000540812 PTPRAP18433 802 aa20.09■□□□□ 0.81
TRIM65-203ENST00000540812 RHBDL3P58872 404 aa20.09■□□□□ 0.81
TRIM65-203ENST00000540812 MAP3K10Q02779 954 aa20.09■□□□□ 0.81
TRIM65-203ENST00000540812 MECOMQ03112 1051 aa20.09■□□□□ 0.81
TRIM65-203ENST00000540812 PI16Q6UXB8 463 aa20.09■□□□□ 0.81
TRIM65-203ENST00000540812 ERICH6Q7L0X2 663 aa20.09■□□□□ 0.81
TRIM65-203ENST00000540812 SLF2Q8IX21 1173 aa20.09■□□□□ 0.81
TRIM65-203ENST00000540812 PICK1Q9NRD5 415 aa20.09■□□□□ 0.81
TRIM65-203ENST00000540812 HMG20BQ9P0W2 317 aa20.09■□□□□ 0.81
TRIM65-203ENST00000540812 SRRDQ9UH36 339 aa20.09■□□□□ 0.81
TRIM65-203ENST00000540812 PNMA6EA0A0J9YXQ4 647 aa20.08■□□□□ 0.81
TRIM65-203ENST00000540812 GNAI2P04899 355 aa20.08■□□□□ 0.81
TRIM65-203ENST00000540812 BCRP11274 1271 aa20.08■□□□□ 0.81
TRIM65-203ENST00000540812 OSBPP22059 807 aa20.08■□□□□ 0.81
TRIM65-203ENST00000540812 PRMT2P55345 433 aa20.08■□□□□ 0.81
TRIM65-203ENST00000540812 ATF7IPQ6VMQ6 1270 aa20.08■□□□□ 0.81
TRIM65-203ENST00000540812 TBC1D9Q6ZT07 1266 aa20.08■□□□□ 0.81
TRIM65-203ENST00000540812 PARK7Q99497 189 aaKnown RBP20.08■□□□□ 0.81
TRIM65-203ENST00000540812 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.08■□□□□ 0.81
TRIM65-203ENST00000540812 GPR75-ASB3A0A0A6YYF3 556 aa20.07■□□□□ 0.8
TRIM65-203ENST00000540812 A0A0G2JLL6 359 aaPredicted RBP20.07■□□□□ 0.8
TRIM65-203ENST00000540812 FMNL1O95466 1100 aaPredicted RBP20.07■□□□□ 0.8
TRIM65-203ENST00000540812 MTFR1Q15390 333 aa20.07■□□□□ 0.8
TRIM65-203ENST00000540812 DIEXFQ68CQ4 756 aaKnown RBP20.07■□□□□ 0.8
TRIM65-203ENST00000540812 PRRT2Q7Z6L0 340 aaPredicted RBP20.07■□□□□ 0.8
TRIM65-203ENST00000540812 FRAT1Q92837 279 aaPredicted RBP20.07■□□□□ 0.8
TRIM65-203ENST00000540812 CLUAP1Q96AJ1 413 aa20.07■□□□□ 0.8
TRIM65-203ENST00000540812 PCDH10Q9P2E7 1040 aa20.07■□□□□ 0.8
TRIM65-203ENST00000540812 AFG3L2Q9Y4W6 797 aa20.07■□□□□ 0.8
TRIM65-203ENST00000540812 IPO8O15397 1037 aaKnown RBP20.06■□□□□ 0.8
TRIM65-203ENST00000540812 CCDC84Q86UT8 332 aaPredicted RBP20.06■□□□□ 0.8
TRIM65-203ENST00000540812 SPATA5Q8NB90 893 aa20.06■□□□□ 0.8
TRIM65-203ENST00000540812 GCC1Q96CN9 775 aa20.06■□□□□ 0.8
TRIM65-203ENST00000540812 MYPNQ86TC9 1320 aa20.05■□□□□ 0.8
TRIM65-203ENST00000540812 GADL1Q6ZQY3 521 aa20.05■□□□□ 0.8
TRIM65-203ENST00000540812 RAET1EQ8TD07 263 aa20.05■□□□□ 0.8
TRIM65-203ENST00000540812 NSUN4Q96CB9 384 aaKnown RBP20.05■□□□□ 0.8
TRIM65-203ENST00000540812 FAM196BA6NMK8 535 aa20.04■□□□□ 0.8
TRIM65-203ENST00000540812 CTNND1O60716 968 aaKnown RBP20.04■□□□□ 0.8
TRIM65-203ENST00000540812 HOXD10P28358 340 aa20.04■□□□□ 0.8
TRIM65-203ENST00000540812 ARID4AP29374 1257 aaPredicted RBP20.04■□□□□ 0.8
TRIM65-203ENST00000540812 MCAMP43121 646 aa20.04■□□□□ 0.8
TRIM65-203ENST00000540812 PRKCZQ05513 592 aa20.04■□□□□ 0.8
TRIM65-203ENST00000540812 G3BP1Q13283 466 aaKnown RBP eCLIP20.04■□□□□ 0.8
TRIM65-203ENST00000540812 HABP4Q5JVS0 413 aaKnown RBP20.04■□□□□ 0.8
TRIM65-203ENST00000540812 GORABQ5T7V8 394 aa20.04■□□□□ 0.8
TRIM65-203ENST00000540812 FASTKD5Q7L8L6 764 aaKnown RBP20.04■□□□□ 0.8
TRIM65-203ENST00000540812 CEP290O15078 2479 aa20.03■□□□□ 0.8
TRIM65-203ENST00000540812 TRIM75PA6NK02 468 aa20.03■□□□□ 0.8
TRIM65-203ENST00000540812 GRK4P32298 578 aa20.03■□□□□ 0.8
TRIM65-203ENST00000540812 TMEM57Q8N5G2 664 aa20.03■□□□□ 0.8
TRIM65-203ENST00000540812 SHISA4Q96DD7 197 aa20.03■□□□□ 0.8
TRIM65-203ENST00000540812 RAI14Q9P0K7 980 aa20.03■□□□□ 0.8
TRIM65-203ENST00000540812 PHIPQ8WWQ0 1821 aa20.02■□□□□ 0.8
TRIM65-203ENST00000540812 TBC1D12O60347 775 aa20.02■□□□□ 0.8
TRIM65-203ENST00000540812 NPM3O75607 178 aaKnown RBP20.02■□□□□ 0.8
TRIM65-203ENST00000540812 FCGRTP55899 365 aa20.02■□□□□ 0.8
TRIM65-203ENST00000540812 GSTO1P78417 241 aa20.02■□□□□ 0.8
TRIM65-203ENST00000540812 GABRQQ9UN88 632 aa20.02■□□□□ 0.8
TRIM65-203ENST00000540812 DOCK1Q14185 1865 aa20.02■□□□□ 0.8
TRIM65-203ENST00000540812 LDHCP07864 332 aa20.01■□□□□ 0.79
TRIM65-203ENST00000540812 SLC45A1Q9Y2W3 748 aa20.01■□□□□ 0.79
TRIM65-203ENST00000540812 PTPRFP10586 1907 aa20.01■□□□□ 0.79
TRIM65-203ENST00000540812 RRP1BQ14684 758 aaKnown RBP20■□□□□ 0.79
TRIM65-203ENST00000540812 TREML2Q5T2D2 321 aa20■□□□□ 0.79
TRIM65-203ENST00000540812 OSBPL5Q9H0X9 879 aaPredicted RBP20■□□□□ 0.79
TRIM65-203ENST00000540812 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20■□□□□ 0.797e-6■□□□□ 9.9
TRIM65-203ENST00000540812 SNRKQ9NRH2 765 aa20■□□□□ 0.79
TRIM65-203ENST00000540812 MAP4K4O95819 1239 aaPredicted RBP19.99■□□□□ 0.79
TRIM65-203ENST00000540812 UQCRFS1P1P0C7P4 283 aa19.99■□□□□ 0.79
TRIM65-203ENST00000540812 CCL5P13501 91 aa19.99■□□□□ 0.79
TRIM65-203ENST00000540812 POLA2Q14181 598 aa19.99■□□□□ 0.79
TRIM65-203ENST00000540812 TEX11Q8IYF3 940 aa19.99■□□□□ 0.79
TRIM65-203ENST00000540812 SH3RF3Q8TEJ3 882 aaPredicted RBP19.99■□□□□ 0.79
TRIM65-203ENST00000540812 DBNDD2Q9BQY9 259 aa19.99■□□□□ 0.79
TRIM65-203ENST00000540812 LRP2BPQ9P2M1 347 aa19.99■□□□□ 0.79
TRIM65-203ENST00000540812 AGTPBP1Q9UPW5 1226 aa19.99■□□□□ 0.79
TRIM65-203ENST00000540812 MGAMO43451 1857 aa19.99■□□□□ 0.79
TRIM65-203ENST00000540812 TNNI3KQ59H18 835 aa19.98■□□□□ 0.79
TRIM65-203ENST00000540812 ZKSCAN2Q63HK3 967 aa19.98■□□□□ 0.79
TRIM65-203ENST00000540812 C1orf115Q9H7X2 142 aa19.98■□□□□ 0.79
TRIM65-203ENST00000540812 BIN2Q9UBW5 565 aaPredicted RBP19.98■□□□□ 0.79
TRIM65-203ENST00000540812 FPGT-TNNI3KV9GXZ4 949 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms