RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 STAP2Q9UGK3 403 aa7.5□□□□□ -1.21
CPSF7-219ENST00000539952 KCNH4Q9UQ05 1017 aa7.5□□□□□ -1.21
CPSF7-219ENST00000539952 ADCY3O60266 1144 aa7.49□□□□□ -1.21
CPSF7-219ENST00000539952 TIE1P35590 1138 aa7.49□□□□□ -1.21
CPSF7-219ENST00000539952 GYG1P46976 350 aa7.49□□□□□ -1.21
CPSF7-219ENST00000539952 IRF5Q13568 498 aa7.49□□□□□ -1.21
CPSF7-219ENST00000539952 MIGA2Q7L4E1 593 aa7.49□□□□□ -1.21
CPSF7-219ENST00000539952 NECAB2Q7Z6G3 386 aa7.49□□□□□ -1.21
CPSF7-219ENST00000539952 CDAN1Q8IWY9 1227 aa7.49□□□□□ -1.21
CPSF7-219ENST00000539952 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-219ENST00000539952 FAM151AQ8WW52 585 aa7.49□□□□□ -1.21
CPSF7-219ENST00000539952 GDF15Q99988 308 aa7.49□□□□□ -1.21
CPSF7-219ENST00000539952 UNC93B1Q9H1C4 597 aa7.49□□□□□ -1.21
CPSF7-219ENST00000539952 ZNF112Q9UJU3 913 aa7.49□□□□□ -1.21
CPSF7-219ENST00000539952 ZBED9Q6R2W3 1325 aa7.49□□□□□ -1.21
CPSF7-219ENST00000539952 SOX1O00570 391 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-219ENST00000539952 BCRP11274 1271 aa7.48□□□□□ -1.21
CPSF7-219ENST00000539952 BCAMP50895 628 aa7.48□□□□□ -1.21
CPSF7-219ENST00000539952 PRKCZQ05513 592 aa7.48□□□□□ -1.21
CPSF7-219ENST00000539952 LRIT3Q3SXY7 679 aa7.48□□□□□ -1.21
CPSF7-219ENST00000539952 APOBEC3HQ6NTF7 200 aaKnown RBP7.48□□□□□ -1.21
CPSF7-219ENST00000539952 DEFB123Q8N688 67 aa7.48□□□□□ -1.21
CPSF7-219ENST00000539952 ANKLE1Q8NAG6 615 aa7.48□□□□□ -1.21
CPSF7-219ENST00000539952 COA7Q96BR5 231 aa7.48□□□□□ -1.21
CPSF7-219ENST00000539952 LRCH3Q96II8 777 aa7.48□□□□□ -1.21
CPSF7-219ENST00000539952 ZNF594Q96JF6 807 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-219ENST00000539952 CRISPLD2Q9H0B8 497 aa7.48□□□□□ -1.21
CPSF7-219ENST00000539952 C9orf78Q9NZ63 289 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-219ENST00000539952 STXBP5LQ9Y2K9 1186 aa7.48□□□□□ -1.21
CPSF7-219ENST00000539952 SLC45A1Q9Y2W3 748 aa7.48□□□□□ -1.21
CPSF7-219ENST00000539952 MAST3O60307 1309 aa7.48□□□□□ -1.21
CPSF7-219ENST00000539952 MROH5Q6ZUA9 1318 aa7.48□□□□□ -1.21
CPSF7-219ENST00000539952 ATMINO43313 823 aaPredicted RBP7.47□□□□□ -1.21
CPSF7-219ENST00000539952 INPP5BP32019 993 aa7.47□□□□□ -1.21
CPSF7-219ENST00000539952 FLT3LGP49771 235 aa7.47□□□□□ -1.21
CPSF7-219ENST00000539952 CACNB3P54284 484 aa7.47□□□□□ -1.21
CPSF7-219ENST00000539952 CCDC27Q2M243 656 aa7.47□□□□□ -1.21
CPSF7-219ENST00000539952 NOL9Q5SY16 702 aaKnown RBP7.47□□□□□ -1.21
CPSF7-219ENST00000539952 BEND3Q5T5X7 828 aa7.47□□□□□ -1.21
CPSF7-219ENST00000539952 GPAT2Q6NUI2 795 aa7.47□□□□□ -1.21
CPSF7-219ENST00000539952 PAWRQ96IZ0 340 aaKnown RBP7.47□□□□□ -1.21
CPSF7-219ENST00000539952 DEFB118Q96PH6 123 aa7.47□□□□□ -1.21
CPSF7-219ENST00000539952 BCL11AQ9H165 835 aa7.47□□□□□ -1.21
CPSF7-219ENST00000539952 PAK6Q9NQU5 681 aaPredicted RBP7.47□□□□□ -1.21
CPSF7-219ENST00000539952 GABRQQ9UN88 632 aa7.47□□□□□ -1.21
CPSF7-219ENST00000539952 ADGRA2Q96PE1 1338 aa7.47□□□□□ -1.21
CPSF7-219ENST00000539952 HTTP42858 3142 aa7.47□□□□□ -1.21
CPSF7-219ENST00000539952 LAMB1P07942 1786 aa7.46□□□□□ -1.21
CPSF7-219ENST00000539952 ZNF646O15015 1829 aaPredicted RBP7.46□□□□□ -1.21
CPSF7-219ENST00000539952 GRM8O00222 908 aa7.46□□□□□ -1.22
CPSF7-219ENST00000539952 TNPO2O14787 897 aaKnown RBP7.46□□□□□ -1.22
CPSF7-219ENST00000539952 VAMP4O75379 141 aa7.46□□□□□ -1.22
CPSF7-219ENST00000539952 ALDH1L1O75891 902 aa7.46□□□□□ -1.22
CPSF7-219ENST00000539952 INHAP05111 366 aa7.46□□□□□ -1.22
CPSF7-219ENST00000539952 CYP2C8P10632 490 aa7.46□□□□□ -1.22
CPSF7-219ENST00000539952 CHAF1AQ13111 956 aaPredicted RBP7.46□□□□□ -1.22
CPSF7-219ENST00000539952 MOGSQ13724 837 aa7.46□□□□□ -1.22
CPSF7-219ENST00000539952 WDR66Q8TBY9 1149 aa7.46□□□□□ -1.22
CPSF7-219ENST00000539952 TSR2Q969E8 191 aaKnown RBP7.46□□□□□ -1.22
CPSF7-219ENST00000539952 NBPF3Q9H094 633 aa7.46□□□□□ -1.22
CPSF7-219ENST00000539952 PRKRIP1Q9H875 184 aaPredicted RBP7.46□□□□□ -1.22
CPSF7-219ENST00000539952 MTMR10Q9NXD2 777 aa7.46□□□□□ -1.22
CPSF7-219ENST00000539952 CENPFP49454 3210 aa7.46□□□□□ -1.22
CPSF7-219ENST00000539952 MYH3P11055 1940 aa7.45□□□□□ -1.22
CPSF7-219ENST00000539952 PDE8BO95263 885 aa7.45□□□□□ -1.22
CPSF7-219ENST00000539952 PRKCSHP14314 528 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-219ENST00000539952 GRIK5Q16478 980 aa7.45□□□□□ -1.22
CPSF7-219ENST00000539952 EPHA10Q5JZY3 1008 aa7.45□□□□□ -1.22
CPSF7-219ENST00000539952 TDHQ8IZJ6 230 aa7.45□□□□□ -1.22
CPSF7-219ENST00000539952 PUS3Q9BZE2 481 aaKnown RBP7.45□□□□□ -1.22
CPSF7-219ENST00000539952 HMX1Q9NP08 348 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-219ENST00000539952 IQSEC3Q9UPP2 1182 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-219ENST00000539952 ZHX2Q9Y6X8 837 aa7.45□□□□□ -1.22
CPSF7-219ENST00000539952 IL16Q14005 1332 aa7.45□□□□□ -1.22
CPSF7-219ENST00000539952 RPTORQ8N122 1335 aa7.45□□□□□ -1.22
CPSF7-219ENST00000539952 RPAP1Q9BWH6 1393 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-219ENST00000539952 ECM29Q5VYK3 1845 aa7.44□□□□□ -1.22
CPSF7-219ENST00000539952 A0A0G2JLL6 359 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-219ENST00000539952 CTNND1O60716 968 aaKnown RBP7.44□□□□□ -1.22
CPSF7-219ENST00000539952 IFIT1P09914 478 aaKnown RBP7.44□□□□□ -1.22
CPSF7-219ENST00000539952 ELNP15502 786 aa7.44□□□□□ -1.22
CPSF7-219ENST00000539952 MAP3K10Q02779 954 aa7.44□□□□□ -1.22
CPSF7-219ENST00000539952 METTL24Q5JXM2 366 aa7.44□□□□□ -1.22
CPSF7-219ENST00000539952 FAM109BQ6ICB4 259 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-219ENST00000539952 CDC42EP5Q6NZY7 148 aa7.44□□□□□ -1.22
CPSF7-219ENST00000539952 PRRT2Q7Z6L0 340 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-219ENST00000539952 WWC1Q8IX03 1113 aa7.44□□□□□ -1.22
CPSF7-219ENST00000539952 SCYL3Q8IZE3 742 aa7.44□□□□□ -1.22
CPSF7-219ENST00000539952 SMCR8Q8TEV9 937 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-219ENST00000539952 COL25A1Q9BXS0 654 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-219ENST00000539952 UBE2OQ9C0C9 1292 aaKnown RBP7.44□□□□□ -1.22
CPSF7-219ENST00000539952 SRCIN1Q9C0H9 1055 aa7.44□□□□□ -1.22
CPSF7-219ENST00000539952 PICK1Q9NRD5 415 aa7.44□□□□□ -1.22
CPSF7-219ENST00000539952 USP40Q9NVE5 1235 aa7.44□□□□□ -1.22
CPSF7-219ENST00000539952 AFG3L2Q9Y4W6 797 aa7.44□□□□□ -1.22
CPSF7-219ENST00000539952 PHF20L1A8MW92 1017 aa7.43□□□□□ -1.22
CPSF7-219ENST00000539952 F6X3S4 739 aa7.43□□□□□ -1.22
CPSF7-219ENST00000539952 POTEB2H3BUK9 544 aa7.43□□□□□ -1.22
CPSF7-219ENST00000539952 ENTPD3O75355 529 aa7.43□□□□□ -1.22
CPSF7-219ENST00000539952 PTPRAP18433 802 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms