RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 BAG3O95817 575 aa13.71□□□□□ -0.21
TNFRSF1A-208ENST00000536194 SLURP2P0DP57 97 aa13.71□□□□□ -0.21
TNFRSF1A-208ENST00000536194 VEGFBP49765 207 aa13.71□□□□□ -0.21
TNFRSF1A-208ENST00000536194 TTLL12Q14166 644 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF1A-208ENST00000536194 MAP3K11Q16584 847 aa13.71□□□□□ -0.21
TNFRSF1A-208ENST00000536194 LDLRAD1Q5T700 205 aa13.71□□□□□ -0.21
TNFRSF1A-208ENST00000536194 TMED8Q6PL24 325 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF1A-208ENST00000536194 TEX11Q8IYF3 940 aa13.71□□□□□ -0.21
TNFRSF1A-208ENST00000536194 NOL10Q9BSC4 688 aaKnown RBP13.71□□□□□ -0.21
TNFRSF1A-208ENST00000536194 ANGEL1Q9UNK9 670 aaKnown RBP13.71□□□□□ -0.21
TNFRSF1A-208ENST00000536194 COL2A1P02458 1487 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF1A-208ENST00000536194 BAZ2AQ9UIF9 1905 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-208ENST00000536194 PLCG2P16885 1265 aa13.7□□□□□ -0.22
TNFRSF1A-208ENST00000536194 UBE3CQ15386 1083 aa13.7□□□□□ -0.22
TNFRSF1A-208ENST00000536194 TGFBRAP1Q8WUH2 860 aa13.7□□□□□ -0.22
TNFRSF1A-208ENST00000536194 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.7□□□□□ -0.22
TNFRSF1A-208ENST00000536194 OSBPL5Q9H0X9 879 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-208ENST00000536194 OSBPL3Q9H4L5 887 aa13.7□□□□□ -0.22
TNFRSF1A-208ENST00000536194 FLT1P17948 1338 aa13.69□□□□□ -0.22
TNFRSF1A-208ENST00000536194 WDR33Q9C0J8 1336 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-208ENST00000536194 MAGEB6P1A0A0J9YX57 407 aa13.69□□□□□ -0.22
TNFRSF1A-208ENST00000536194 FAM155AB1AL88 458 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-208ENST00000536194 PPP1R12BO60237 982 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-208ENST00000536194 RGMBQ6NW40 437 aa13.69□□□□□ -0.22
TNFRSF1A-208ENST00000536194 PAXIP1Q6ZW49 1069 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-208ENST00000536194 MIGA2Q7L4E1 593 aa13.69□□□□□ -0.22
TNFRSF1A-208ENST00000536194 ARMC9Q7Z3E5 817 aa13.69□□□□□ -0.22
TNFRSF1A-208ENST00000536194 MAPKAPK5Q8IW41 473 aa13.69□□□□□ -0.22
TNFRSF1A-208ENST00000536194 LCORLQ8N3X6 602 aa13.69□□□□□ -0.22
TNFRSF1A-208ENST00000536194 CLMNQ96JQ2 1002 aa13.69□□□□□ -0.22
TNFRSF1A-208ENST00000536194 CAPNS2Q96L46 248 aa13.69□□□□□ -0.22
TNFRSF1A-208ENST00000536194 PUS7LQ9H0K6 701 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-208ENST00000536194 ATAD5Q96QE3 1844 aa13.69□□□□□ -0.22
TNFRSF1A-208ENST00000536194 AOC2O75106 756 aa13.68□□□□□ -0.22
TNFRSF1A-208ENST00000536194 GRM1Q13255 1194 aa13.68□□□□□ -0.22
TNFRSF1A-208ENST00000536194 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF1A-208ENST00000536194 RASAL3Q86YV0 1011 aa13.68□□□□□ -0.22
TNFRSF1A-208ENST00000536194 JMYQ8N9B5 988 aa13.68□□□□□ -0.22
TNFRSF1A-208ENST00000536194 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.68□□□□□ -0.22
TNFRSF1A-208ENST00000536194 OSBP2Q969R2 916 aa13.68□□□□□ -0.22
TNFRSF1A-208ENST00000536194 CSRNP1Q96S65 589 aa13.68□□□□□ -0.22
TNFRSF1A-208ENST00000536194 ZIC5Q96T25 663 aa13.68□□□□□ -0.22
TNFRSF1A-208ENST00000536194 ARMT1Q9H993 441 aa13.68□□□□□ -0.22
TNFRSF1A-208ENST00000536194 DOCK1Q14185 1865 aa13.67□□□□□ -0.22
TNFRSF1A-208ENST00000536194 RNF113AO15541 343 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-208ENST00000536194 MBD4O95243 580 aa13.67□□□□□ -0.22
TNFRSF1A-208ENST00000536194 NEFLP07196 543 aa13.67□□□□□ -0.22
TNFRSF1A-208ENST00000536194 SLC10A3P09131 477 aa13.67□□□□□ -0.22
TNFRSF1A-208ENST00000536194 IREB2P48200 963 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-208ENST00000536194 ZNF157P51786 506 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-208ENST00000536194 MAP3K10Q02779 954 aa13.67□□□□□ -0.22
TNFRSF1A-208ENST00000536194 CERS3Q8IU89 383 aa13.67□□□□□ -0.22
TNFRSF1A-208ENST00000536194 ZSCAN29Q8IWY8 852 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-208ENST00000536194 FSD1Q9BTV5 496 aa13.67□□□□□ -0.22
TNFRSF1A-208ENST00000536194 PHIPQ8WWQ0 1821 aa13.67□□□□□ -0.22
TNFRSF1A-208ENST00000536194 FAM196BA6NMK8 535 aa13.66□□□□□ -0.22
TNFRSF1A-208ENST00000536194 PRKAB2O43741 272 aa13.66□□□□□ -0.22
TNFRSF1A-208ENST00000536194 INPP5BP32019 993 aa13.66□□□□□ -0.22
TNFRSF1A-208ENST00000536194 ECE1P42892 770 aa13.66□□□□□ -0.22
TNFRSF1A-208ENST00000536194 ZSCAN25Q6NSZ9 544 aa13.66□□□□□ -0.22
TNFRSF1A-208ENST00000536194 CENPQQ7L2Z9 268 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1A-208ENST00000536194 SKAP1Q86WV1 359 aa13.66□□□□□ -0.22
TNFRSF1A-208ENST00000536194 SDR42E1Q8WUS8 393 aa13.66□□□□□ -0.22
TNFRSF1A-208ENST00000536194 APPBP2Q92624 585 aa13.66□□□□□ -0.22
TNFRSF1A-208ENST00000536194 EVI5LQ96CN4 794 aa13.66□□□□□ -0.22
TNFRSF1A-208ENST00000536194 SEC62Q99442 399 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1A-208ENST00000536194 SAP30BPQ9UHR5 308 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1A-208ENST00000536194 ZNF112Q9UJU3 913 aa13.66□□□□□ -0.22
TNFRSF1A-208ENST00000536194 PALD1Q9ULE6 856 aa13.66□□□□□ -0.22
TNFRSF1A-208ENST00000536194 PHF20L1A8MW92 1017 aa13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 M0R2C6 588 aa13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 ZFYP08048 801 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 GSPT1P15170 499 aaKnown RBP13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 GJA5P36382 358 aa13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 USP5P45974 858 aa13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 EVX2Q03828 476 aa13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 VGLL4Q14135 290 aa13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 SLC4A8Q2Y0W8 1093 aa13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 ZMYM1Q5SVZ6 1142 aa13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 DCAF15Q66K64 600 aa13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 ANKRD13AQ8IZ07 590 aa13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 ZKSCAN4Q969J2 545 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 HOOK2Q96ED9 719 aa13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 WRNIP1Q96S55 665 aa13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 ZNF341Q9BYN7 854 aa13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 CRNKL1Q9BZJ0 848 aaKnown RBP13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 DCP1AQ9NPI6 582 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 SNCAIPQ9Y6H5 919 aa13.65□□□□□ -0.22
TNFRSF1A-208ENST00000536194 UNCXA6NJT0 531 aa13.64□□□□□ -0.23
TNFRSF1A-208ENST00000536194 MAP3K9P80192 1104 aa13.64□□□□□ -0.23
TNFRSF1A-208ENST00000536194 TTC22Q5TAA0 569 aa13.64□□□□□ -0.23
TNFRSF1A-208ENST00000536194 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
TNFRSF1A-208ENST00000536194 CCDC102AQ96A19 550 aa13.64□□□□□ -0.23
TNFRSF1A-208ENST00000536194 AIDAQ96BJ3 306 aa13.64□□□□□ -0.23
TNFRSF1A-208ENST00000536194 CCDC136Q96JN2 1154 aa13.64□□□□□ -0.23
TNFRSF1A-208ENST00000536194 STRBPQ96SI9 672 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1A-208ENST00000536194 DNAJC18Q9H819 358 aa13.64□□□□□ -0.23
TNFRSF1A-208ENST00000536194 ELP3Q9H9T3 547 aa13.64□□□□□ -0.23
TNFRSF1A-208ENST00000536194 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF1A-208ENST00000536194 PTPRFP10586 1907 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms