RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 MAPKAPK5Q8IW41 473 aa21.66■■□□□ 1.06
DDX55-204ENST00000536079 CAPNS2Q96L46 248 aa21.66■■□□□ 1.06
DDX55-204ENST00000536079 ZIC5Q96T25 663 aa21.66■■□□□ 1.06
DDX55-204ENST00000536079 NOL10Q9BSC4 688 aaKnown RBP21.66■■□□□ 1.06
DDX55-204ENST00000536079 WDR33Q9C0J8 1336 aaKnown RBP21.65■■□□□ 1.06
DDX55-204ENST00000536079 MAP3K11Q16584 847 aa21.65■■□□□ 1.06
DDX55-204ENST00000536079 RGMBQ6NW40 437 aa21.65■■□□□ 1.06
DDX55-204ENST00000536079 SKAP1Q86WV1 359 aa21.65■■□□□ 1.06
DDX55-204ENST00000536079 LCORLQ8N3X6 602 aa21.65■■□□□ 1.06
DDX55-204ENST00000536079 HHIPL1Q96JK4 782 aa21.65■■□□□ 1.06
DDX55-204ENST00000536079 CLMNQ96JQ2 1002 aa21.65■■□□□ 1.06
DDX55-204ENST00000536079 OSBPL5Q9H0X9 879 aaPredicted RBP21.65■■□□□ 1.06
DDX55-204ENST00000536079 MAGEB6P1A0A0J9YX57 407 aa21.64■■□□□ 1.05
DDX55-204ENST00000536079 NPM3O75607 178 aaKnown RBP21.64■■□□□ 1.05
DDX55-204ENST00000536079 UBE3CQ15386 1083 aa21.64■■□□□ 1.05
DDX55-204ENST00000536079 ARMC9Q7Z3E5 817 aa21.64■■□□□ 1.05
DDX55-204ENST00000536079 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.64■■□□□ 1.053e-8■■□□□ 12.8
DDX55-204ENST00000536079 PUS7LQ9H0K6 701 aaKnown RBP21.64■■□□□ 1.05
DDX55-204ENST00000536079 ARMT1Q9H993 441 aa21.64■■□□□ 1.05
DDX55-204ENST00000536079 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.64■■□□□ 1.05
DDX55-204ENST00000536079 FLT1P17948 1338 aa21.63■■□□□ 1.05
DDX55-204ENST00000536079 PPP1R12BO60237 982 aaPredicted RBP21.63■■□□□ 1.05
DDX55-204ENST00000536079 PLCG2P16885 1265 aa21.63■■□□□ 1.05
DDX55-204ENST00000536079 ZNF157P51786 506 aaPredicted RBP21.63■■□□□ 1.05
DDX55-204ENST00000536079 OSBPL3Q9H4L5 887 aa21.63■■□□□ 1.05
DDX55-204ENST00000536079 RNF113AO15541 343 aaKnown RBP21.62■■□□□ 1.05
DDX55-204ENST00000536079 PRKAB2O43741 272 aa21.62■■□□□ 1.05
DDX55-204ENST00000536079 MBD4O95243 580 aa21.62■■□□□ 1.05
DDX55-204ENST00000536079 TMED8Q6PL24 325 aaPredicted RBP21.62■■□□□ 1.05
DDX55-204ENST00000536079 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.62■■□□□ 1.05
DDX55-204ENST00000536079 RASAL3Q86YV0 1011 aa21.62■■□□□ 1.05
DDX55-204ENST00000536079 OSBP2Q969R2 916 aa21.62■■□□□ 1.05
DDX55-204ENST00000536079 CSRNP1Q96S65 589 aa21.62■■□□□ 1.05
DDX55-204ENST00000536079 SAP30BPQ9UHR5 308 aaKnown RBP21.62■■□□□ 1.05
DDX55-204ENST00000536079 FAM196BA6NMK8 535 aa21.61■■□□□ 1.05
DDX55-204ENST00000536079 SLC4A8Q2Y0W8 1093 aa21.61■■□□□ 1.05
DDX55-204ENST00000536079 ZSCAN29Q8IWY8 852 aaPredicted RBP21.61■■□□□ 1.05
DDX55-204ENST00000536079 JMYQ8N9B5 988 aa21.61■■□□□ 1.05
DDX55-204ENST00000536079 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.61■■□□□ 1.05
DDX55-204ENST00000536079 SEC62Q99442 399 aaKnown RBP21.61■■□□□ 1.05
DDX55-204ENST00000536079 CDK5RAP2Q96SN8 1893 aa21.6■■□□□ 1.05
DDX55-204ENST00000536079 SLC10A3P09131 477 aa21.6■■□□□ 1.05
DDX55-204ENST00000536079 IREB2P48200 963 aaKnown RBP21.6■■□□□ 1.05
DDX55-204ENST00000536079 EVX2Q03828 476 aa21.6■■□□□ 1.05
DDX55-204ENST00000536079 SDR42E1Q8WUS8 393 aa21.6■■□□□ 1.05
DDX55-204ENST00000536079 FSD1Q9BTV5 496 aa21.6■■□□□ 1.05
DDX55-204ENST00000536079 PALD1Q9ULE6 856 aa21.6■■□□□ 1.05
DDX55-204ENST00000536079 PCNTO95613 3336 aa21.6■■□□□ 1.05
DDX55-204ENST00000536079 M0R2C6 588 aa21.59■■□□□ 1.05
DDX55-204ENST00000536079 NEFLP07196 543 aa21.59■■□□□ 1.05
DDX55-204ENST00000536079 INPP5BP32019 993 aa21.59■■□□□ 1.05
DDX55-204ENST00000536079 GJA5P36382 358 aa21.59■■□□□ 1.05
DDX55-204ENST00000536079 USP5P45974 858 aa21.59■■□□□ 1.05
DDX55-204ENST00000536079 MAP3K10Q02779 954 aa21.59■■□□□ 1.05
DDX55-204ENST00000536079 MKRN3Q13064 507 aaKnown RBP21.59■■□□□ 1.05
DDX55-204ENST00000536079 CNKSR2Q8WXI2 1034 aa21.59■■□□□ 1.05
DDX55-204ENST00000536079 ZKSCAN4Q969J2 545 aaPredicted RBP21.59■■□□□ 1.05
DDX55-204ENST00000536079 ZNF112Q9UJU3 913 aa21.59■■□□□ 1.05
DDX55-204ENST00000536079 PHF20L1A8MW92 1017 aa21.58■■□□□ 1.05
DDX55-204ENST00000536079 ECE1P42892 770 aa21.58■■□□□ 1.05
DDX55-204ENST00000536079 MAP3K9P80192 1104 aa21.58■■□□□ 1.05
DDX55-204ENST00000536079 VGLL4Q14135 290 aa21.58■■□□□ 1.05
DDX55-204ENST00000536079 RRP1BQ14684 758 aaKnown RBP21.58■■□□□ 1.05
DDX55-204ENST00000536079 ZSCAN25Q6NSZ9 544 aa21.58■■□□□ 1.05
DDX55-204ENST00000536079 APPBP2Q92624 585 aa21.58■■□□□ 1.05
DDX55-204ENST00000536079 EVI5LQ96CN4 794 aa21.58■■□□□ 1.05
DDX55-204ENST00000536079 WRNIP1Q96S55 665 aa21.58■■□□□ 1.05
DDX55-204ENST00000536079 ZNF341Q9BYN7 854 aa21.58■■□□□ 1.05
DDX55-204ENST00000536079 ELP3Q9H9T3 547 aa21.58■■□□□ 1.05
DDX55-204ENST00000536079 OTOFQ9HC10 1997 aa21.57■■□□□ 1.04
DDX55-204ENST00000536079 GSPT1P15170 499 aaKnown RBP21.57■■□□□ 1.04
DDX55-204ENST00000536079 DCAF15Q66K64 600 aa21.57■■□□□ 1.04
DDX55-204ENST00000536079 ANKRD13AQ8IZ07 590 aa21.57■■□□□ 1.04
DDX55-204ENST00000536079 CCDC102AQ96A19 550 aa21.57■■□□□ 1.04
DDX55-204ENST00000536079 STRBPQ96SI9 672 aaKnown RBP21.57■■□□□ 1.04
DDX55-204ENST00000536079 SNCAIPQ9Y6H5 919 aa21.57■■□□□ 1.04
DDX55-204ENST00000536079 COL2A1P02458 1487 aaPredicted RBP21.57■■□□□ 1.04
DDX55-204ENST00000536079 FOCADQ5VW36 1801 aa21.57■■□□□ 1.04
DDX55-204ENST00000536079 MYH7P12883 1935 aa21.57■■□□□ 1.04
DDX55-204ENST00000536079 TRIM6-TRIM34B2RNG4 842 aa21.56■■□□□ 1.04
DDX55-204ENST00000536079 SMIM22K7EJ46 135 aa21.56■■□□□ 1.04
DDX55-204ENST00000536079 ZMYM1Q5SVZ6 1142 aa21.56■■□□□ 1.04
DDX55-204ENST00000536079 CENPQQ7L2Z9 268 aaPredicted RBP21.56■■□□□ 1.04
DDX55-204ENST00000536079 RILPL2Q969X0 211 aa21.56■■□□□ 1.04
DDX55-204ENST00000536079 SLC10A4Q96EP9 437 aa21.56■■□□□ 1.04
DDX55-204ENST00000536079 CRNKL1Q9BZJ0 848 aaKnown RBP21.56■■□□□ 1.04
DDX55-204ENST00000536079 DNAJC18Q9H819 358 aa21.56■■□□□ 1.04
DDX55-204ENST00000536079 DCP1AQ9NPI6 582 aaPredicted RBP21.56■■□□□ 1.04
DDX55-204ENST00000536079 SIPA1L1O43166 1804 aa21.56■■□□□ 1.04
DDX55-204ENST00000536079 ZFYP08048 801 aaPredicted RBP21.55■■□□□ 1.04
DDX55-204ENST00000536079 CYP2D6P10635 497 aa21.55■■□□□ 1.04
DDX55-204ENST00000536079 KIF23Q02241 960 aaPredicted RBP21.55■■□□□ 1.04
DDX55-204ENST00000536079 SPRYD7Q5W111 196 aa21.55■■□□□ 1.04
DDX55-204ENST00000536079 CERS3Q8IU89 383 aa21.55■■□□□ 1.04
DDX55-204ENST00000536079 AIDAQ96BJ3 306 aa21.55■■□□□ 1.04
DDX55-204ENST00000536079 HOOK2Q96ED9 719 aa21.55■■□□□ 1.04
DDX55-204ENST00000536079 WNK4Q96J92 1243 aa21.55■■□□□ 1.04
DDX55-204ENST00000536079 CCDC136Q96JN2 1154 aa21.55■■□□□ 1.04
DDX55-204ENST00000536079 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.55■■□□□ 1.04
DDX55-204ENST00000536079 AK9Q5TCS8 1911 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms