RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 WNK4Q96J92 1243 aa10.88□□□□□ -0.67
CHD4-204ENST00000535810 DBNDD2Q9BQY9 259 aa10.88□□□□□ -0.67
CHD4-204ENST00000535810 DDX19BQ9UMR2 479 aa10.88□□□□□ -0.67
CHD4-204ENST00000535810 COG6Q9Y2V7 657 aa10.88□□□□□ -0.67
CHD4-204ENST00000535810 UQCRFS1P1P0C7P4 283 aa10.87□□□□□ -0.67
CHD4-204ENST00000535810 GJA5P36382 358 aa10.87□□□□□ -0.67
CHD4-204ENST00000535810 MECOMQ03112 1051 aa10.87□□□□□ -0.67
CHD4-204ENST00000535810 SPTY2D1Q68D10 685 aaPredicted RBP10.87□□□□□ -0.67
CHD4-204ENST00000535810 TBC1D9Q6ZT07 1266 aa10.87□□□□□ -0.67
CHD4-204ENST00000535810 CTU1Q7Z7A3 348 aaKnown RBP10.87□□□□□ -0.67
CHD4-204ENST00000535810 FAM151AQ8WW52 585 aa10.87□□□□□ -0.67
CHD4-204ENST00000535810 ZBTB40Q9NUA8 1239 aa10.87□□□□□ -0.67
CHD4-204ENST00000535810 USP40Q9NVE5 1235 aa10.87□□□□□ -0.67
CHD4-204ENST00000535810 TLR7Q9NYK1 1049 aaKnown RBP10.87□□□□□ -0.67
CHD4-204ENST00000535810 FAM198AQ9UFP1 575 aa10.87□□□□□ -0.67
CHD4-204ENST00000535810 DBNLQ9UJU6 430 aaKnown RBP10.87□□□□□ -0.67
CHD4-204ENST00000535810 EXOC6BQ9Y2D4 811 aa10.87□□□□□ -0.67
CHD4-204ENST00000535810 MYH2Q9UKX2 1941 aa10.87□□□□□ -0.67
CHD4-204ENST00000535810 LAMB1P07942 1786 aa10.87□□□□□ -0.67
CHD4-204ENST00000535810 MROH7-TTC4A0A0A0MT08 1334 aa10.86□□□□□ -0.67
CHD4-204ENST00000535810 MANSC4A6NHS7 340 aaPredicted RBP10.86□□□□□ -0.67
CHD4-204ENST00000535810 MAP3K9P80192 1104 aa10.86□□□□□ -0.67
CHD4-204ENST00000535810 TCP10Q12799 353 aa10.86□□□□□ -0.67
CHD4-204ENST00000535810 C20orf194Q5TEA3 1177 aa10.86□□□□□ -0.67
CHD4-204ENST00000535810 ERICH6Q7L0X2 663 aa10.86□□□□□ -0.67
CHD4-204ENST00000535810 SLF2Q8IX21 1173 aa10.86□□□□□ -0.67
CHD4-204ENST00000535810 OPTNQ96CV9 577 aa10.86□□□□□ -0.67
CHD4-204ENST00000535810 HOOK2Q96ED9 719 aa10.86□□□□□ -0.67
CHD4-204ENST00000535810 FAM163AQ96GL9 167 aaPredicted RBP10.86□□□□□ -0.67
CHD4-204ENST00000535810 ELP3Q9H9T3 547 aa10.86□□□□□ -0.67
CHD4-204ENST00000535810 MKI67P46013 3256 aaKnown RBP10.85□□□□□ -0.67
CHD4-204ENST00000535810 HTTP42858 3142 aa10.85□□□□□ -0.67
CHD4-204ENST00000535810 WDHD1O75717 1129 aaPredicted RBP10.85□□□□□ -0.67
CHD4-204ENST00000535810 BTDP43251 543 aa10.85□□□□□ -0.67
CHD4-204ENST00000535810 RGS3P49796 1198 aa10.85□□□□□ -0.67
CHD4-204ENST00000535810 PDE3AQ14432 1141 aa10.85□□□□□ -0.67
CHD4-204ENST00000535810 PKN2Q16513 984 aaKnown RBP10.85□□□□□ -0.67
CHD4-204ENST00000535810 CCDC158Q5M9N0 1113 aa10.85□□□□□ -0.67
CHD4-204ENST00000535810 TTC39AQ5SRH9 613 aa10.85□□□□□ -0.67
CHD4-204ENST00000535810 DCAF15Q66K64 600 aa10.85□□□□□ -0.67
CHD4-204ENST00000535810 ERC1Q8IUD2 1116 aa10.85□□□□□ -0.67
CHD4-204ENST00000535810 SIRT2Q8IXJ6 389 aa10.85□□□□□ -0.67
CHD4-204ENST00000535810 RPAP2Q8IXW5 612 aaPredicted RBP10.85□□□□□ -0.67
CHD4-204ENST00000535810 NSUN4Q96CB9 384 aaKnown RBP10.85□□□□□ -0.67
CHD4-204ENST00000535810 EAF2Q96CJ1 260 aaPredicted RBP10.85□□□□□ -0.67
CHD4-204ENST00000535810 ZNF512BQ96KM6 892 aaPredicted RBP10.85□□□□□ -0.67
CHD4-204ENST00000535810 WRNIP1Q96S55 665 aa10.85□□□□□ -0.67
CHD4-204ENST00000535810 CFHR5Q9BXR6 569 aa10.85□□□□□ -0.67
CHD4-204ENST00000535810 IDI2Q9BXS1 227 aa10.85□□□□□ -0.67
CHD4-204ENST00000535810 CSADQ9Y600 493 aa10.85□□□□□ -0.67
CHD4-204ENST00000535810 SNCAIPQ9Y6H5 919 aa10.85□□□□□ -0.67
CHD4-204ENST00000535810 ATRNL1Q5VV63 1379 aa10.85□□□□□ -0.67
CHD4-204ENST00000535810 GPR75-ASB3A0A0A6YYF3 556 aa10.84□□□□□ -0.67
CHD4-204ENST00000535810 IGF2BP3O00425 579 aaKnown RBP eCLIP10.84□□□□□ -0.67
CHD4-204ENST00000535810 ENTPD3O75355 529 aa10.84□□□□□ -0.67
CHD4-204ENST00000535810 TBC1D8O95759 1140 aa10.84□□□□□ -0.67
CHD4-204ENST00000535810 ALDH1A1P00352 501 aa10.84□□□□□ -0.67
CHD4-204ENST00000535810 INHBEP58166 350 aa10.84□□□□□ -0.67
CHD4-204ENST00000535810 GSTO1P78417 241 aa10.84□□□□□ -0.67
CHD4-204ENST00000535810 MIGA2Q7L4E1 593 aa10.84□□□□□ -0.67
CHD4-204ENST00000535810 ZFPM1Q8IX07 1006 aa10.84□□□□□ -0.67
CHD4-204ENST00000535810 ZKSCAN4Q969J2 545 aaPredicted RBP10.84□□□□□ -0.67
CHD4-204ENST00000535810 CCDC8Q9H0W5 538 aaPredicted RBP10.84□□□□□ -0.67
CHD4-204ENST00000535810 CHMP4BQ9H444 224 aaKnown RBP10.84□□□□□ -0.67
CHD4-204ENST00000535810 SNRKQ9NRH2 765 aa10.84□□□□□ -0.67
CHD4-204ENST00000535810 RAI14Q9P0K7 980 aa10.84□□□□□ -0.67
CHD4-204ENST00000535810 HPS5Q9UPZ3 1129 aa10.84□□□□□ -0.67
CHD4-204ENST00000535810 MAST2Q6P0Q8 1798 aa10.83□□□□□ -0.68
CHD4-204ENST00000535810 TESPA1A2RU30 521 aaPredicted RBP10.83□□□□□ -0.68
CHD4-204ENST00000535810 SPDYE5A6NIY4 337 aa10.83□□□□□ -0.68
CHD4-204ENST00000535810 HMMRO75330 724 aa10.83□□□□□ -0.68
CHD4-204ENST00000535810 CYP2E1P05181 493 aaPredicted RBP10.83□□□□□ -0.68
CHD4-204ENST00000535810 RHBDL3P58872 404 aa10.83□□□□□ -0.68
CHD4-204ENST00000535810 HSP90AB4PQ58FF6 505 aa10.83□□□□□ -0.68
CHD4-204ENST00000535810 NOM1Q5C9Z4 860 aaKnown RBP10.83□□□□□ -0.68
CHD4-204ENST00000535810 SH3BP5LQ7L8J4 393 aa10.83□□□□□ -0.68
CHD4-204ENST00000535810 AACSQ86V21 672 aa10.83□□□□□ -0.68
CHD4-204ENST00000535810 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.83□□□□□ -0.68
CHD4-204ENST00000535810 RHPN1Q8TCX5 695 aa10.83□□□□□ -0.68
CHD4-204ENST00000535810 ZNF296Q8WUU4 475 aaPredicted RBP10.83□□□□□ -0.68
CHD4-204ENST00000535810 OTUD5Q96G74 571 aa10.83□□□□□ -0.68
CHD4-204ENST00000535810 MS4A3Q96HJ5 214 aa10.83□□□□□ -0.68
CHD4-204ENST00000535810 MS4A4AQ96JQ5 239 aa10.83□□□□□ -0.68
CHD4-204ENST00000535810 PTPN18Q99952 460 aa10.83□□□□□ -0.68
CHD4-204ENST00000535810 ZNF341Q9BYN7 854 aa10.83□□□□□ -0.68
CHD4-204ENST00000535810 R3HDMLQ9H3Y0 253 aa10.83□□□□□ -0.68
CHD4-204ENST00000535810 DDX4Q9NQI0 724 aaKnown RBP10.83□□□□□ -0.68
CHD4-204ENST00000535810 LRP2BPQ9P2M1 347 aa10.83□□□□□ -0.68
CHD4-204ENST00000535810 DOCK2Q92608 1830 aa10.82□□□□□ -0.68
CHD4-204ENST00000535810 GPR25O00155 361 aa10.82□□□□□ -0.68
CHD4-204ENST00000535810 HAX1O00165 279 aa10.82□□□□□ -0.68
CHD4-204ENST00000535810 LDHCP07864 332 aa10.82□□□□□ -0.68
CHD4-204ENST00000535810 INPP5BP32019 993 aa10.82□□□□□ -0.68
CHD4-204ENST00000535810 ZAP70P43403 619 aa10.82□□□□□ -0.68
CHD4-204ENST00000535810 PICALMQ13492 652 aa10.82□□□□□ -0.68
CHD4-204ENST00000535810 ERO1BQ86YB8 467 aa10.82□□□□□ -0.68
CHD4-204ENST00000535810 BRI3BPQ8WY22 251 aa10.82□□□□□ -0.68
CHD4-204ENST00000535810 IL1RAPL2Q9NP60 686 aa10.82□□□□□ -0.68
CHD4-204ENST00000535810 PIH1D3Q9NQM4 214 aaKnown RBP10.82□□□□□ -0.68
CHD4-204ENST00000535810 ZNF112Q9UJU3 913 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms