RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 MPHOSPH8Q99549 860 aa21.95■■□□□ 1.1
SMPD1-210ENST00000534405 DNAJC5Q9H3Z4 198 aa21.95■■□□□ 1.1
SMPD1-210ENST00000534405 ANKRD65E5RJM6 399 aa21.95■■□□□ 1.1
SMPD1-210ENST00000534405 CCDC57Q2TAC2 916 aa21.95■■□□□ 1.1
SMPD1-210ENST00000534405 NAA16Q6N069 864 aaPredicted RBP21.95■■□□□ 1.1
SMPD1-210ENST00000534405 XAGE2Q96GT9 111 aa21.95■■□□□ 1.1
SMPD1-210ENST00000534405 ANO10Q9NW15 660 aa21.95■■□□□ 1.1
SMPD1-210ENST00000534405 RAI14Q9P0K7 980 aa21.95■■□□□ 1.1
SMPD1-210ENST00000534405 TOGARAM1Q9Y4F4 1720 aa21.94■■□□□ 1.1
SMPD1-210ENST00000534405 CFAP45Q9UL16 551 aa21.94■■□□□ 1.1
SMPD1-210ENST00000534405 SPEF2Q9C093 1822 aa21.94■■□□□ 1.1
SMPD1-210ENST00000534405 MYH15Q9Y2K3 1946 aa21.94■■□□□ 1.1
SMPD1-210ENST00000534405 TXLNAP40222 546 aa21.94■■□□□ 1.1
SMPD1-210ENST00000534405 PPP2R3AQ06190 1150 aa21.94■■□□□ 1.1
SMPD1-210ENST00000534405 GNL2Q13823 731 aaKnown RBP21.94■■□□□ 1.1
SMPD1-210ENST00000534405 NBPF20Q3BBV1 942 aa21.94■■□□□ 1.1
SMPD1-210ENST00000534405 TICAM2Q86XR7 235 aa21.94■■□□□ 1.1
SMPD1-210ENST00000534405 MICALL1Q8N3F8 863 aa21.94■■□□□ 1.1
SMPD1-210ENST00000534405 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.94■■□□□ 1.1
SMPD1-210ENST00000534405 TACO1Q9BSH4 297 aaKnown RBP21.94■■□□□ 1.1
SMPD1-210ENST00000534405 NWD2Q9ULI1 1742 aa21.93■■□□□ 1.1
SMPD1-210ENST00000534405 GUCY1B3Q02153 619 aa21.93■■□□□ 1.1
SMPD1-210ENST00000534405 SYNE4Q8N205 404 aa21.93■■□□□ 1.1
SMPD1-210ENST00000534405 FAN1Q9Y2M0 1017 aa21.93■■□□□ 1.1
SMPD1-210ENST00000534405 EIF3JO75822 258 aaKnown RBP21.92■■□□□ 1.1
SMPD1-210ENST00000534405 USP8P40818 1118 aa21.92■■□□□ 1.1
SMPD1-210ENST00000534405 PI16Q6UXB8 463 aa21.92■■□□□ 1.1
SMPD1-210ENST00000534405 HDXQ7Z353 690 aa21.92■■□□□ 1.1
SMPD1-210ENST00000534405 TMC6Q7Z403 805 aa21.92■■□□□ 1.1
SMPD1-210ENST00000534405 ILDR1Q86SU0 546 aaPredicted RBP21.92■■□□□ 1.1
SMPD1-210ENST00000534405 GOLGA1Q92805 767 aa21.92■■□□□ 1.1
SMPD1-210ENST00000534405 USP28Q96RU2 1077 aa21.92■■□□□ 1.1
SMPD1-210ENST00000534405 MRFAP1Q9Y605 127 aa21.92■■□□□ 1.1
SMPD1-210ENST00000534405 SOS2Q07890 1332 aaPredicted RBP21.92■■□□□ 1.1
SMPD1-210ENST00000534405 PPP1R12AO14974 1030 aaPredicted RBP21.92■■□□□ 1.1
SMPD1-210ENST00000534405 HAND2P61296 217 aa21.92■■□□□ 1.1
SMPD1-210ENST00000534405 TTC39AQ5SRH9 613 aa21.92■■□□□ 1.1
SMPD1-210ENST00000534405 CEP57L1Q8IYX8 460 aa21.92■■□□□ 1.1
SMPD1-210ENST00000534405 AOPEPQ8N6M6 819 aa21.92■■□□□ 1.1
SMPD1-210ENST00000534405 GOLPH3LQ9H4A5 285 aa21.92■■□□□ 1.1
SMPD1-210ENST00000534405 RCOR1Q9UKL0 485 aa21.92■■□□□ 1.1
SMPD1-210ENST00000534405 FDPSP14324 419 aaKnown RBP21.91■■□□□ 1.1
SMPD1-210ENST00000534405 DNAJC10Q8IXB1 793 aa21.91■■□□□ 1.1
SMPD1-210ENST00000534405 KAT2BQ92831 832 aa21.91■■□□□ 1.1
SMPD1-210ENST00000534405 FAM212AQ96EL1 285 aa21.91■■□□□ 1.1
SMPD1-210ENST00000534405 ZNF274Q96GC6 653 aaPredicted RBP21.91■■□□□ 1.1
SMPD1-210ENST00000534405 ASAP1Q9ULH1 1129 aa21.91■■□□□ 1.1
SMPD1-210ENST00000534405 MNAT1P51948 309 aa21.91■■□□□ 1.1
SMPD1-210ENST00000534405 BEND6Q5SZJ8 279 aaPredicted RBP21.91■■□□□ 1.1
SMPD1-210ENST00000534405 ZAP70P43403 619 aa21.9■■□□□ 1.1
SMPD1-210ENST00000534405 WASHC4Q2M389 1173 aa21.9■■□□□ 1.1
SMPD1-210ENST00000534405 C21orf2O43822 256 aa21.9■■□□□ 1.1
SMPD1-210ENST00000534405 ERLIN2O94905 339 aa21.9■■□□□ 1.1
SMPD1-210ENST00000534405 HNRNPH1P31943 449 aaKnown RBP21.9■■□□□ 1.1
SMPD1-210ENST00000534405 NAT10Q9H0A0 1025 aaKnown RBP21.9■■□□□ 1.1
SMPD1-210ENST00000534405 PUS7LQ9H0K6 701 aaKnown RBP21.9■■□□□ 1.1
SMPD1-210ENST00000534405 TMOD3Q9NYL9 352 aa21.9■■□□□ 1.1
SMPD1-210ENST00000534405 CARMIL3Q8ND23 1372 aa21.9■■□□□ 1.1
SMPD1-210ENST00000534405 PCCAP05165 728 aaPredicted RBP21.89■■□□□ 1.1
SMPD1-210ENST00000534405 USP5P45974 858 aa21.89■■□□□ 1.1
SMPD1-210ENST00000534405 TRIM28Q13263 835 aaKnown RBP21.89■■□□□ 1.1
SMPD1-210ENST00000534405 FCHSD1Q86WN1 690 aa21.89■■□□□ 1.1
SMPD1-210ENST00000534405 FAM71BQ8TC56 605 aa21.89■■□□□ 1.1
SMPD1-210ENST00000534405 XPO4Q9C0E2 1151 aaKnown RBP21.89■■□□□ 1.1
SMPD1-210ENST00000534405 FGAP02671 866 aa21.89■■□□□ 1.09
SMPD1-210ENST00000534405 CSF1RP07333 972 aa21.89■■□□□ 1.09
SMPD1-210ENST00000534405 LRCH2Q5VUJ6 765 aa21.89■■□□□ 1.09
SMPD1-210ENST00000534405 CCAR1Q8IX12 1150 aaKnown RBP21.89■■□□□ 1.09
SMPD1-210ENST00000534405 MCM6Q14566 821 aa21.88■■□□□ 1.09
SMPD1-210ENST00000534405 CNNM3Q8NE01 707 aa21.88■■□□□ 1.09
SMPD1-210ENST00000534405 STAG1Q8WVM7 1258 aa21.88■■□□□ 1.09
SMPD1-210ENST00000534405 A1CFQ9NQ94 594 aaKnown RBP21.88■■□□□ 1.09
SMPD1-210ENST00000534405 N4BP1O75113 896 aaKnown RBP21.88■■□□□ 1.09
SMPD1-210ENST00000534405 KCNV1Q6PIU1 500 aa21.88■■□□□ 1.09
SMPD1-210ENST00000534405 PIGBQ92521 554 aa21.88■■□□□ 1.09
SMPD1-210ENST00000534405 PLA2G12BQ9BX93 195 aa21.88■■□□□ 1.09
SMPD1-210ENST00000534405 RIC1Q4ADV7 1423 aa21.87■■□□□ 1.09
SMPD1-210ENST00000534405 ZBTB38Q8NAP3 1195 aaPredicted RBP21.87■■□□□ 1.09
SMPD1-210ENST00000534405 ABCA3Q99758 1704 aa21.87■■□□□ 1.09
SMPD1-210ENST00000534405 VWA3AA6NCI4 1184 aa21.87■■□□□ 1.09
SMPD1-210ENST00000534405 IFIT5Q13325 482 aaKnown RBP21.87■■□□□ 1.09
SMPD1-210ENST00000534405 HLFQ16534 295 aa21.87■■□□□ 1.09
SMPD1-210ENST00000534405 OTUD7BQ6GQQ9 843 aa21.87■■□□□ 1.09
SMPD1-210ENST00000534405 FBXL16Q8N461 479 aa21.87■■□□□ 1.09
SMPD1-210ENST00000534405 FBXO3Q9UK99 471 aa21.87■■□□□ 1.09
SMPD1-210ENST00000534405 A0A087WWV3 80 aa21.86■■□□□ 1.09
SMPD1-210ENST00000534405 ZSCAN12O43309 604 aa21.86■■□□□ 1.09
SMPD1-210ENST00000534405 EVA1CP58658 441 aa21.86■■□□□ 1.09
SMPD1-210ENST00000534405 SGSM3Q96HU1 749 aa21.86■■□□□ 1.09
SMPD1-210ENST00000534405 IFNKQ9P0W0 207 aa21.86■■□□□ 1.09
SMPD1-210ENST00000534405 SLAIN2Q9P270 581 aa21.86■■□□□ 1.09
SMPD1-210ENST00000534405 RAB21Q9UL25 225 aa21.86■■□□□ 1.09
SMPD1-210ENST00000534405 L1RE1Q9UN81 338 aa21.86■■□□□ 1.09
SMPD1-210ENST00000534405 GPTP24298 496 aa21.86■■□□□ 1.09
SMPD1-210ENST00000534405 ANTXR2P58335 489 aa21.86■■□□□ 1.09
SMPD1-210ENST00000534405 KIF6Q6ZMV9 814 aa21.86■■□□□ 1.09
SMPD1-210ENST00000534405 RAB11FIP4Q86YS3 637 aa21.86■■□□□ 1.09
SMPD1-210ENST00000534405 MB21D2Q8IYB1 491 aaPredicted RBP21.86■■□□□ 1.09
SMPD1-210ENST00000534405 ENGASEQ8NFI3 743 aa21.86■■□□□ 1.09
SMPD1-210ENST00000534405 IMMTQ16891 758 aaKnown RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms