RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 PICALMQ13492 652 aa28.26■■■□□ 2.11
PKP3-210ENST00000533249 FRAT1Q92837 279 aaPredicted RBP28.26■■■□□ 2.11
PKP3-210ENST00000533249 MKI67P46013 3256 aaKnown RBP28.26■■■□□ 2.11
PKP3-210ENST00000533249 ADGRA2Q96PE1 1338 aa28.25■■■□□ 2.11
PKP3-210ENST00000533249 CTGFP29279 349 aa28.25■■■□□ 2.11
PKP3-210ENST00000533249 PSMC4P43686 418 aa28.25■■■□□ 2.11
PKP3-210ENST00000533249 SCYL3Q8IZE3 742 aa28.25■■■□□ 2.11
PKP3-210ENST00000533249 DDX4Q9NQI0 724 aaKnown RBP28.25■■■□□ 2.11
PKP3-210ENST00000533249 PICK1Q9NRD5 415 aa28.25■■■□□ 2.11
PKP3-210ENST00000533249 ZHX2Q9Y6X8 837 aa28.25■■■□□ 2.11
PKP3-210ENST00000533249 MROH7-TTC4A0A0A0MT08 1334 aa28.24■■■□□ 2.11
PKP3-210ENST00000533249 DDTLA6NHG4 134 aaPredicted RBP28.24■■■□□ 2.11
PKP3-210ENST00000533249 CXCL11O14625 94 aa28.24■■■□□ 2.11
PKP3-210ENST00000533249 IPO8O15397 1037 aaKnown RBP28.24■■■□□ 2.11
PKP3-210ENST00000533249 SLURP2P0DP57 97 aa28.24■■■□□ 2.11
PKP3-210ENST00000533249 TRIM27P14373 513 aa28.24■■■□□ 2.11
PKP3-210ENST00000533249 PRMT2P55345 433 aa28.24■■■□□ 2.11
PKP3-210ENST00000533249 MECOMQ03112 1051 aa28.24■■■□□ 2.11
PKP3-210ENST00000533249 ERICH6Q7L0X2 663 aa28.24■■■□□ 2.11
PKP3-210ENST00000533249 FAM163AQ96GL9 167 aaPredicted RBP28.24■■■□□ 2.11
PKP3-210ENST00000533249 TRIM47Q96LD4 638 aa28.24■■■□□ 2.11
PKP3-210ENST00000533249 GORABQ5T7V8 394 aa28.23■■■□□ 2.11
PKP3-210ENST00000533249 GPAT2Q6NUI2 795 aa28.23■■■□□ 2.11
PKP3-210ENST00000533249 CLUAP1Q96AJ1 413 aa28.23■■■□□ 2.11
PKP3-210ENST00000533249 GCC1Q96CN9 775 aa28.23■■■□□ 2.11
PKP3-210ENST00000533249 PARK7Q99497 189 aaKnown RBP28.23■■■□□ 2.11
PKP3-210ENST00000533249 BRCA2P51587 3418 aa28.23■■■□□ 2.11
PKP3-210ENST00000533249 BCAR3O75815 825 aa28.22■■■□□ 2.11
PKP3-210ENST00000533249 FMNL1O95466 1100 aaPredicted RBP28.22■■■□□ 2.11
PKP3-210ENST00000533249 GNAI2P04899 355 aa28.22■■■□□ 2.11
PKP3-210ENST00000533249 CYP2C8P10632 490 aa28.22■■■□□ 2.11
PKP3-210ENST00000533249 PTPRAP18433 802 aa28.22■■■□□ 2.11
PKP3-210ENST00000533249 PI16Q6UXB8 463 aa28.22■■■□□ 2.11
PKP3-210ENST00000533249 ATF7IPQ6VMQ6 1270 aa28.22■■■□□ 2.11
PKP3-210ENST00000533249 HMG20BQ9P0W2 317 aa28.22■■■□□ 2.11
PKP3-210ENST00000533249 SRRDQ9UH36 339 aa28.22■■■□□ 2.11
PKP3-210ENST00000533249 OSBPP22059 807 aa28.21■■■□□ 2.11
PKP3-210ENST00000533249 PNMA6EA0A0J9YXQ4 647 aa28.2■■■□□ 2.1
PKP3-210ENST00000533249 HOXD10P28358 340 aa28.2■■■□□ 2.1
PKP3-210ENST00000533249 GADL1Q6ZQY3 521 aa28.2■■■□□ 2.1
PKP3-210ENST00000533249 TBC1D9Q6ZT07 1266 aa28.2■■■□□ 2.1
PKP3-210ENST00000533249 ZNF384Q8TF68 577 aa28.2■■■□□ 2.1
PKP3-210ENST00000533249 GPR75-ASB3A0A0A6YYF3 556 aa28.19■■■□□ 2.1
PKP3-210ENST00000533249 A0A0G2JLL6 359 aaPredicted RBP28.19■■■□□ 2.1
PKP3-210ENST00000533249 RHBDL3P58872 404 aa28.19■■■□□ 2.1
PKP3-210ENST00000533249 MAP3K10Q02779 954 aa28.19■■■□□ 2.1
PKP3-210ENST00000533249 G3BP1Q13283 466 aaKnown RBP eCLIP28.19■■■□□ 2.1
PKP3-210ENST00000533249 FASTKD5Q7L8L6 764 aaKnown RBP28.19■■■□□ 2.1
PKP3-210ENST00000533249 PRRT2Q7Z6L0 340 aaPredicted RBP28.19■■■□□ 2.1
PKP3-210ENST00000533249 SPATA5Q8NB90 893 aa28.19■■■□□ 2.1
PKP3-210ENST00000533249 RAET1EQ8TD07 263 aa28.19■■■□□ 2.1
PKP3-210ENST00000533249 PCDH10Q9P2E7 1040 aa28.19■■■□□ 2.1
PKP3-210ENST00000533249 DOCK1Q14185 1865 aa28.19■■■□□ 2.1
PKP3-210ENST00000533249 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.18■■■□□ 2.1
PKP3-210ENST00000533249 AFG3L2Q9Y4W6 797 aa28.18■■■□□ 2.1
PKP3-210ENST00000533249 MYPNQ86TC9 1320 aa28.18■■■□□ 2.1
PKP3-210ENST00000533249 CTNND1O60716 968 aaKnown RBP28.17■■■□□ 2.1
PKP3-210ENST00000533249 BCRP11274 1271 aa28.17■■■□□ 2.1
PKP3-210ENST00000533249 MTFR1Q15390 333 aa28.17■■■□□ 2.1
PKP3-210ENST00000533249 CCDC84Q86UT8 332 aaPredicted RBP28.17■■■□□ 2.1
PKP3-210ENST00000533249 RAI14Q9P0K7 980 aa28.17■■■□□ 2.1
PKP3-210ENST00000533249 TRIM75PA6NK02 468 aa28.16■■■□□ 2.1
PKP3-210ENST00000533249 LDHCP07864 332 aa28.16■■■□□ 2.1
PKP3-210ENST00000533249 GSTO1P78417 241 aa28.16■■■□□ 2.1
PKP3-210ENST00000533249 NSUN4Q96CB9 384 aaKnown RBP28.16■■■□□ 2.1
PKP3-210ENST00000533249 FAM196BA6NMK8 535 aa28.15■■■□□ 2.1
PKP3-210ENST00000533249 ARID4AP29374 1257 aaPredicted RBP28.15■■■□□ 2.1
PKP3-210ENST00000533249 GRK4P32298 578 aa28.15■■■□□ 2.1
PKP3-210ENST00000533249 FCGRTP55899 365 aa28.15■■■□□ 2.1
PKP3-210ENST00000533249 PTPRFP10586 1907 aa28.15■■■□□ 2.1
PKP3-210ENST00000533249 PHIPQ8WWQ0 1821 aa28.15■■■□□ 2.1
PKP3-210ENST00000533249 MCAMP43121 646 aa28.14■■■□□ 2.1
PKP3-210ENST00000533249 PRKCZQ05513 592 aa28.14■■■□□ 2.1
PKP3-210ENST00000533249 HABP4Q5JVS0 413 aaKnown RBP28.14■■■□□ 2.1
PKP3-210ENST00000533249 TMEM57Q8N5G2 664 aa28.14■■■□□ 2.1
PKP3-210ENST00000533249 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.14■■■□□ 2.1
PKP3-210ENST00000533249 MGAMO43451 1857 aa28.14■■■□□ 2.1
PKP3-210ENST00000533249 LRP2BPQ9P2M1 347 aa28.13■■■□□ 2.09
PKP3-210ENST00000533249 BIN2Q9UBW5 565 aaPredicted RBP28.13■■■□□ 2.09
PKP3-210ENST00000533249 TBC1D12O60347 775 aa28.12■■■□□ 2.09
PKP3-210ENST00000533249 NPM3O75607 178 aaKnown RBP28.12■■■□□ 2.09
PKP3-210ENST00000533249 UQCRFS1P1P0C7P4 283 aa28.12■■■□□ 2.09
PKP3-210ENST00000533249 ZKSCAN2Q63HK3 967 aa28.11■■■□□ 2.09
PKP3-210ENST00000533249 SMCR8Q8TEV9 937 aaPredicted RBP28.11■■■□□ 2.09
PKP3-210ENST00000533249 SNRKQ9NRH2 765 aa28.11■■■□□ 2.09
PKP3-210ENST00000533249 SLC45A1Q9Y2W3 748 aa28.11■■■□□ 2.09
PKP3-210ENST00000533249 MAP4K4O95819 1239 aaPredicted RBP28.1■■■□□ 2.09
PKP3-210ENST00000533249 OS9Q13438 667 aaPredicted RBP28.1■■■□□ 2.09
PKP3-210ENST00000533249 TEX11Q8IYF3 940 aa28.1■■■□□ 2.09
PKP3-210ENST00000533249 SHISA4Q96DD7 197 aa28.1■■■□□ 2.09
PKP3-210ENST00000533249 OSBPL5Q9H0X9 879 aaPredicted RBP28.1■■■□□ 2.09
PKP3-210ENST00000533249 GABRQQ9UN88 632 aa28.1■■■□□ 2.09
PKP3-210ENST00000533249 CCL5P13501 91 aa28.09■■■□□ 2.09
PKP3-210ENST00000533249 TTC39AQ5SRH9 613 aa28.08■■■□□ 2.09
PKP3-210ENST00000533249 SH3RF3Q8TEJ3 882 aaPredicted RBP28.08■■■□□ 2.09
PKP3-210ENST00000533249 NOL10Q9BSC4 688 aaKnown RBP28.08■■■□□ 2.09
PKP3-210ENST00000533249 AGTPBP1Q9UPW5 1226 aa28.08■■■□□ 2.09
PKP3-210ENST00000533249 COL2A1P02458 1487 aaPredicted RBP28.08■■■□□ 2.09
PKP3-210ENST00000533249 UBXN2AP68543 259 aa28.07■■■□□ 2.08
PKP3-210ENST00000533249 POLA2Q14181 598 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms