RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 DDTLA6NHG4 134 aaPredicted RBP21.14■□□□□ 0.97
RPUSD4-207ENST00000532800 PICALMQ13492 652 aa21.14■□□□□ 0.97
RPUSD4-207ENST00000532800 MVPQ14764 893 aaKnown RBP21.14■□□□□ 0.97
RPUSD4-207ENST00000532800 PI16Q6UXB8 463 aa21.14■□□□□ 0.97
RPUSD4-207ENST00000532800 ZSCAN29Q8IWY8 852 aaPredicted RBP21.14■□□□□ 0.97
RPUSD4-207ENST00000532800 ZNF384Q8TF68 577 aa21.14■□□□□ 0.97
RPUSD4-207ENST00000532800 CLUAP1Q96AJ1 413 aa21.14■□□□□ 0.97
RPUSD4-207ENST00000532800 NEUROD6Q96NK8 337 aa21.14■□□□□ 0.97
RPUSD4-207ENST00000532800 TMEM106CQ9BVX2 250 aa21.14■□□□□ 0.97
RPUSD4-207ENST00000532800 PTPRFP10586 1907 aa21.14■□□□□ 0.97
RPUSD4-207ENST00000532800 PNMA6EA0A0J9YXQ4 647 aa21.13■□□□□ 0.97
RPUSD4-207ENST00000532800 MECOMQ03112 1051 aa21.13■□□□□ 0.97
RPUSD4-207ENST00000532800 ATF7IPQ6VMQ6 1270 aa21.13■□□□□ 0.97
RPUSD4-207ENST00000532800 NBPF11Q86T75 865 aa21.13■□□□□ 0.97
RPUSD4-207ENST00000532800 SCYL3Q8IZE3 742 aa21.13■□□□□ 0.97
RPUSD4-207ENST00000532800 FAM163AQ96GL9 167 aaPredicted RBP21.13■□□□□ 0.97
RPUSD4-207ENST00000532800 HMG20BQ9P0W2 317 aa21.13■□□□□ 0.97
RPUSD4-207ENST00000532800 PHIPQ8WWQ0 1821 aa21.13■□□□□ 0.97
RPUSD4-207ENST00000532800 IPO8O15397 1037 aaKnown RBP21.12■□□□□ 0.97
RPUSD4-207ENST00000532800 GNAI2P04899 355 aa21.12■□□□□ 0.97
RPUSD4-207ENST00000532800 SPTY2D1Q68D10 685 aaPredicted RBP21.12■□□□□ 0.97
RPUSD4-207ENST00000532800 GPAT2Q6NUI2 795 aa21.12■□□□□ 0.97
RPUSD4-207ENST00000532800 ERICH6Q7L0X2 663 aa21.12■□□□□ 0.97
RPUSD4-207ENST00000532800 SLF2Q8IX21 1173 aa21.12■□□□□ 0.97
RPUSD4-207ENST00000532800 TRIM47Q96LD4 638 aa21.12■□□□□ 0.97
RPUSD4-207ENST00000532800 PTPRAP18433 802 aa21.11■□□□□ 0.97
RPUSD4-207ENST00000532800 PSMC4P43686 418 aa21.11■□□□□ 0.97
RPUSD4-207ENST00000532800 RHBDL3P58872 404 aa21.11■□□□□ 0.97
RPUSD4-207ENST00000532800 SLC4A8Q2Y0W8 1093 aa21.11■□□□□ 0.97
RPUSD4-207ENST00000532800 TBC1D9Q6ZT07 1266 aa21.11■□□□□ 0.97
RPUSD4-207ENST00000532800 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.11■□□□□ 0.97
RPUSD4-207ENST00000532800 ZHX2Q9Y6X8 837 aa21.11■□□□□ 0.97
RPUSD4-207ENST00000532800 MGAMO43451 1857 aa21.1■□□□□ 0.97
RPUSD4-207ENST00000532800 GPR75-ASB3A0A0A6YYF3 556 aa21.1■□□□□ 0.97
RPUSD4-207ENST00000532800 CXCL11O14625 94 aa21.1■□□□□ 0.97
RPUSD4-207ENST00000532800 GNRH1P01148 92 aa21.1■□□□□ 0.97
RPUSD4-207ENST00000532800 CYP2C8P10632 490 aa21.1■□□□□ 0.97
RPUSD4-207ENST00000532800 MAP3K10Q02779 954 aa21.1■□□□□ 0.97
RPUSD4-207ENST00000532800 SPATA5Q8NB90 893 aa21.1■□□□□ 0.97
RPUSD4-207ENST00000532800 PICK1Q9NRD5 415 aa21.1■□□□□ 0.97
RPUSD4-207ENST00000532800 A0A0G2JLL6 359 aaPredicted RBP21.09■□□□□ 0.97
RPUSD4-207ENST00000532800 OSBPP22059 807 aa21.09■□□□□ 0.97
RPUSD4-207ENST00000532800 ARID4AP29374 1257 aaPredicted RBP21.09■□□□□ 0.97
RPUSD4-207ENST00000532800 PRRT2Q7Z6L0 340 aaPredicted RBP21.09■□□□□ 0.97
RPUSD4-207ENST00000532800 CCDC84Q86UT8 332 aaPredicted RBP21.09■□□□□ 0.97
RPUSD4-207ENST00000532800 TMEM57Q8N5G2 664 aa21.09■□□□□ 0.97
RPUSD4-207ENST00000532800 PARK7Q99497 189 aaKnown RBP21.09■□□□□ 0.97
RPUSD4-207ENST00000532800 SRRDQ9UH36 339 aa21.09■□□□□ 0.97
RPUSD4-207ENST00000532800 FAM196BA6NMK8 535 aa21.08■□□□□ 0.97
RPUSD4-207ENST00000532800 MCAMP43121 646 aa21.08■□□□□ 0.97
RPUSD4-207ENST00000532800 PRMT2P55345 433 aa21.08■□□□□ 0.97
RPUSD4-207ENST00000532800 GORABQ5T7V8 394 aa21.08■□□□□ 0.97
RPUSD4-207ENST00000532800 NSUN4Q96CB9 384 aaKnown RBP21.08■□□□□ 0.97
RPUSD4-207ENST00000532800 AFG3L2Q9Y4W6 797 aa21.08■□□□□ 0.97
RPUSD4-207ENST00000532800 FMNL1O95466 1100 aaPredicted RBP21.07■□□□□ 0.96
RPUSD4-207ENST00000532800 BCRP11274 1271 aa21.07■□□□□ 0.96
RPUSD4-207ENST00000532800 G3BP1Q13283 466 aaKnown RBP eCLIP21.07■□□□□ 0.96
RPUSD4-207ENST00000532800 GADL1Q6ZQY3 521 aa21.07■□□□□ 0.96
RPUSD4-207ENST00000532800 ATAD5Q96QE3 1844 aa21.06■□□□□ 0.96
RPUSD4-207ENST00000532800 MAST2Q6P0Q8 1798 aa21.06■□□□□ 0.96
RPUSD4-207ENST00000532800 MTFR1Q15390 333 aa21.06■□□□□ 0.96
RPUSD4-207ENST00000532800 RAI14Q9P0K7 980 aa21.06■□□□□ 0.96
RPUSD4-207ENST00000532800 MYPNQ86TC9 1320 aa21.05■□□□□ 0.96
RPUSD4-207ENST00000532800 TRIM75PA6NK02 468 aa21.05■□□□□ 0.96
RPUSD4-207ENST00000532800 CTNND1O60716 968 aaKnown RBP21.05■□□□□ 0.96
RPUSD4-207ENST00000532800 FASTKD5Q7L8L6 764 aaKnown RBP21.05■□□□□ 0.96
RPUSD4-207ENST00000532800 RAET1EQ8TD07 263 aa21.05■□□□□ 0.96
RPUSD4-207ENST00000532800 HOXD10P28358 340 aa21.04■□□□□ 0.96
RPUSD4-207ENST00000532800 GSTO1P78417 241 aa21.04■□□□□ 0.96
RPUSD4-207ENST00000532800 PRKCZQ05513 592 aa21.04■□□□□ 0.96
RPUSD4-207ENST00000532800 ZKSCAN2Q63HK3 967 aa21.04■□□□□ 0.96
RPUSD4-207ENST00000532800 GCC1Q96CN9 775 aa21.04■□□□□ 0.96
RPUSD4-207ENST00000532800 C1orf115Q9H7X2 142 aa21.04■□□□□ 0.96
RPUSD4-207ENST00000532800 MYO5AQ9Y4I1 1855 aaKnown RBP21.04■□□□□ 0.96
RPUSD4-207ENST00000532800 SIPA1L1O43166 1804 aa21.04■□□□□ 0.96
RPUSD4-207ENST00000532800 COL2A1P02458 1487 aaPredicted RBP21.03■□□□□ 0.96
RPUSD4-207ENST00000532800 TBC1D12O60347 775 aa21.03■□□□□ 0.96
RPUSD4-207ENST00000532800 NPM3O75607 178 aaKnown RBP21.03■□□□□ 0.96
RPUSD4-207ENST00000532800 LDHCP07864 332 aa21.03■□□□□ 0.96
RPUSD4-207ENST00000532800 GRK4P32298 578 aa21.03■□□□□ 0.96
RPUSD4-207ENST00000532800 POLA2Q14181 598 aa21.03■□□□□ 0.96
RPUSD4-207ENST00000532800 SHISA4Q96DD7 197 aa21.03■□□□□ 0.96
RPUSD4-207ENST00000532800 OSBPL5Q9H0X9 879 aaPredicted RBP21.03■□□□□ 0.96
RPUSD4-207ENST00000532800 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.03■□□□□ 0.96
RPUSD4-207ENST00000532800 SNRKQ9NRH2 765 aa21.03■□□□□ 0.96
RPUSD4-207ENST00000532800 LRP2BPQ9P2M1 347 aa21.03■□□□□ 0.96
RPUSD4-207ENST00000532800 CDK5RAP2Q96SN8 1893 aa21.03■□□□□ 0.96
RPUSD4-207ENST00000532800 UQCRFS1P1P0C7P4 283 aa21.02■□□□□ 0.96
RPUSD4-207ENST00000532800 FCGRTP55899 365 aa21.02■□□□□ 0.96
RPUSD4-207ENST00000532800 TNNI3KQ59H18 835 aa21.02■□□□□ 0.96
RPUSD4-207ENST00000532800 TEX11Q8IYF3 940 aa21.02■□□□□ 0.96
RPUSD4-207ENST00000532800 SH3RF3Q8TEJ3 882 aaPredicted RBP21.02■□□□□ 0.96
RPUSD4-207ENST00000532800 DBNDD2Q9BQY9 259 aa21.02■□□□□ 0.96
RPUSD4-207ENST00000532800 GABRQQ9UN88 632 aa21.02■□□□□ 0.96
RPUSD4-207ENST00000532800 FPGT-TNNI3KV9GXZ4 949 aa21.02■□□□□ 0.96
RPUSD4-207ENST00000532800 LOC285556D6RIA3 1793 aa21.02■□□□□ 0.96
RPUSD4-207ENST00000532800 RRP1BQ14684 758 aaKnown RBP21.01■□□□□ 0.95
RPUSD4-207ENST00000532800 SSH3Q8TE77 659 aa21.01■□□□□ 0.95
RPUSD4-207ENST00000532800 SLC45A1Q9Y2W3 748 aa21.01■□□□□ 0.95
RPUSD4-207ENST00000532800 MAP4K4O95819 1239 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms