RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 UQCRFS1P1P0C7P4 283 aa20.73■□□□□ 0.91
CPSF1-207ENST00000531727 GSTO1P78417 241 aa20.73■□□□□ 0.91
CPSF1-207ENST00000531727 MAP3K10Q02779 954 aa20.73■□□□□ 0.91
CPSF1-207ENST00000531727 PICALMQ13492 652 aa20.73■□□□□ 0.91
CPSF1-207ENST00000531727 SSH3Q8TE77 659 aa20.73■□□□□ 0.91
CPSF1-207ENST00000531727 NSUN4Q96CB9 384 aaKnown RBP20.73■□□□□ 0.91
CPSF1-207ENST00000531727 ZSWIM8A7E2V4 1837 aa20.73■□□□□ 0.91
CPSF1-207ENST00000531727 DDTLA6NHG4 134 aaPredicted RBP20.72■□□□□ 0.91
CPSF1-207ENST00000531727 LDHCP07864 332 aa20.72■□□□□ 0.91
CPSF1-207ENST00000531727 MCAMP43121 646 aa20.72■□□□□ 0.91
CPSF1-207ENST00000531727 RHBDL3P58872 404 aa20.72■□□□□ 0.91
CPSF1-207ENST00000531727 ATP8B2P98198 1209 aa20.72■□□□□ 0.91
CPSF1-207ENST00000531727 MOGSQ13724 837 aa20.72■□□□□ 0.91
CPSF1-207ENST00000531727 TBC1D9Q6ZT07 1266 aa20.72■□□□□ 0.91
CPSF1-207ENST00000531727 FTSJ3Q8IY81 847 aaKnown RBP20.72■□□□□ 0.91
CPSF1-207ENST00000531727 SCYL3Q8IZE3 742 aa20.72■□□□□ 0.91
CPSF1-207ENST00000531727 GPR108Q9NPR9 543 aa20.72■□□□□ 0.91
CPSF1-207ENST00000531727 DOCK1Q14185 1865 aa20.72■□□□□ 0.91
CPSF1-207ENST00000531727 PDHXO00330 501 aa20.71■□□□□ 0.91
CPSF1-207ENST00000531727 CXCL11O14625 94 aa20.71■□□□□ 0.91
CPSF1-207ENST00000531727 NPM3O75607 178 aaKnown RBP20.71■□□□□ 0.91
CPSF1-207ENST00000531727 MAP4K4O95819 1239 aaPredicted RBP20.71■□□□□ 0.91
CPSF1-207ENST00000531727 LACTBP83111 547 aaPredicted RBP20.71■□□□□ 0.91
CPSF1-207ENST00000531727 KIF22Q14807 665 aa20.71■□□□□ 0.91
CPSF1-207ENST00000531727 PICK1Q9NRD5 415 aa20.71■□□□□ 0.91
CPSF1-207ENST00000531727 CENPFP49454 3210 aa20.7■□□□□ 0.9
CPSF1-207ENST00000531727 MAST2Q6P0Q8 1798 aa20.7■□□□□ 0.9
CPSF1-207ENST00000531727 POTEFA5A3E0 1075 aa20.7■□□□□ 0.9
CPSF1-207ENST00000531727 OS9Q13438 667 aaPredicted RBP20.7■□□□□ 0.9
CPSF1-207ENST00000531727 TNNI3KQ59H18 835 aa20.7■□□□□ 0.9
CPSF1-207ENST00000531727 C17orf99Q6UX52 265 aa20.7■□□□□ 0.9
CPSF1-207ENST00000531727 ITPRIPQ8IWB1 547 aa20.7■□□□□ 0.9
CPSF1-207ENST00000531727 ARHGAP39Q9C0H5 1083 aa20.7■□□□□ 0.9
CPSF1-207ENST00000531727 C1orf115Q9H7X2 142 aa20.7■□□□□ 0.9
CPSF1-207ENST00000531727 RAI14Q9P0K7 980 aa20.7■□□□□ 0.9
CPSF1-207ENST00000531727 PTCH2Q9Y6C5 1203 aa20.7■□□□□ 0.9
CPSF1-207ENST00000531727 FPGT-TNNI3KV9GXZ4 949 aa20.7■□□□□ 0.9
CPSF1-207ENST00000531727 COL2A1P02458 1487 aaPredicted RBP20.69■□□□□ 0.9
CPSF1-207ENST00000531727 ZBTB7BO15156 539 aaPredicted RBP20.69■□□□□ 0.9
CPSF1-207ENST00000531727 RLBP1P12271 317 aa20.69■□□□□ 0.9
CPSF1-207ENST00000531727 PTPRAP18433 802 aa20.69■□□□□ 0.9
CPSF1-207ENST00000531727 SLC9C1Q4G0N8 1177 aa20.69■□□□□ 0.9
CPSF1-207ENST00000531727 PRPF38BQ5VTL8 546 aaKnown RBP20.69■□□□□ 0.9
CPSF1-207ENST00000531727 CPA4Q9UI42 421 aa20.69■□□□□ 0.9
CPSF1-207ENST00000531727 ZHX2Q9Y6X8 837 aa20.69■□□□□ 0.9
CPSF1-207ENST00000531727 ADGRA2Q96PE1 1338 aa20.69■□□□□ 0.9
CPSF1-207ENST00000531727 PHIPQ8WWQ0 1821 aa20.69■□□□□ 0.9
CPSF1-207ENST00000531727 SURF6O75683 361 aaKnown RBP20.68■□□□□ 0.9
CPSF1-207ENST00000531727 GNRH1P01148 92 aa20.68■□□□□ 0.9
CPSF1-207ENST00000531727 SLURP2P0DP57 97 aa20.68■□□□□ 0.9
CPSF1-207ENST00000531727 TTC39AQ5SRH9 613 aa20.68■□□□□ 0.9
CPSF1-207ENST00000531727 GPAT2Q6NUI2 795 aa20.68■□□□□ 0.9
CPSF1-207ENST00000531727 NBPF11Q86T75 865 aa20.68■□□□□ 0.9
CPSF1-207ENST00000531727 ZNF333Q96JL9 665 aa20.68■□□□□ 0.9
CPSF1-207ENST00000531727 DBNDD2Q9BQY9 259 aa20.68■□□□□ 0.9
CPSF1-207ENST00000531727 LRP2BPQ9P2M1 347 aa20.68■□□□□ 0.9
CPSF1-207ENST00000531727 ZBED9Q6R2W3 1325 aa20.68■□□□□ 0.9
CPSF1-207ENST00000531727 A0A0G2JLL6 359 aaPredicted RBP20.67■□□□□ 0.9
CPSF1-207ENST00000531727 TBC1D12O60347 775 aa20.67■□□□□ 0.9
CPSF1-207ENST00000531727 CTNND1O60716 968 aaKnown RBP20.67■□□□□ 0.9
CPSF1-207ENST00000531727 CCDC158Q5M9N0 1113 aa20.67■□□□□ 0.9
CPSF1-207ENST00000531727 PRRT2Q7Z6L0 340 aaPredicted RBP20.67■□□□□ 0.9
CPSF1-207ENST00000531727 NOP58Q9Y2X3 529 aaKnown RBP20.67■□□□□ 0.9
CPSF1-207ENST00000531727 AFG3L2Q9Y4W6 797 aa20.67■□□□□ 0.9
CPSF1-207ENST00000531727 PDE4DIPQ5VU43 2346 aa20.67■□□□□ 0.9
CPSF1-207ENST00000531727 PTPRFP10586 1907 aa20.66■□□□□ 0.9
CPSF1-207ENST00000531727 PRMT2P55345 433 aa20.66■□□□□ 0.9
CPSF1-207ENST00000531727 FASTKD5Q7L8L6 764 aaKnown RBP20.66■□□□□ 0.9
CPSF1-207ENST00000531727 PARK7Q99497 189 aaKnown RBP20.66■□□□□ 0.9
CPSF1-207ENST00000531727 OSBPL5Q9H0X9 879 aaPredicted RBP20.66■□□□□ 0.9
CPSF1-207ENST00000531727 SNRKQ9NRH2 765 aa20.66■□□□□ 0.9
CPSF1-207ENST00000531727 SLC34A2O95436 690 aa20.65■□□□□ 0.9
CPSF1-207ENST00000531727 TEX11Q8IYF3 940 aa20.65■□□□□ 0.9
CPSF1-207ENST00000531727 ZNF512BQ96KM6 892 aaPredicted RBP20.65■□□□□ 0.9
CPSF1-207ENST00000531727 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.65■□□□□ 0.9
CPSF1-207ENST00000531727 CTGFP29279 349 aa20.64■□□□□ 0.89
CPSF1-207ENST00000531727 PSMC4P43686 418 aa20.64■□□□□ 0.89
CPSF1-207ENST00000531727 NAA16Q6N069 864 aaPredicted RBP20.64■□□□□ 0.89
CPSF1-207ENST00000531727 GADL1Q6ZQY3 521 aa20.64■□□□□ 0.89
CPSF1-207ENST00000531727 TRIM47Q96LD4 638 aa20.64■□□□□ 0.89
CPSF1-207ENST00000531727 NOL10Q9BSC4 688 aaKnown RBP20.64■□□□□ 0.89
CPSF1-207ENST00000531727 TMEM106CQ9BVX2 250 aa20.64■□□□□ 0.89
CPSF1-207ENST00000531727 ATAD5Q96QE3 1844 aa20.63■□□□□ 0.89
CPSF1-207ENST00000531727 FAM196BA6NMK8 535 aa20.63■□□□□ 0.89
CPSF1-207ENST00000531727 ECM2O94769 699 aaPredicted RBP20.63■□□□□ 0.89
CPSF1-207ENST00000531727 CYP2E1P05181 493 aaPredicted RBP20.63■□□□□ 0.89
CPSF1-207ENST00000531727 CYP2C8P10632 490 aa20.63■□□□□ 0.89
CPSF1-207ENST00000531727 EN2P19622 333 aaPredicted RBP20.63■□□□□ 0.89
CPSF1-207ENST00000531727 SH3RF3Q8TEJ3 882 aaPredicted RBP20.63■□□□□ 0.89
CPSF1-207ENST00000531727 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.63■□□□□ 0.89
CPSF1-207ENST00000531727 SLC45A1Q9Y2W3 748 aa20.63■□□□□ 0.89
CPSF1-207ENST00000531727 CDK5RAP2Q96SN8 1893 aa20.62■□□□□ 0.89
CPSF1-207ENST00000531727 MYO5AQ9Y4I1 1855 aaKnown RBP20.62■□□□□ 0.89
CPSF1-207ENST00000531727 FMNL1O95466 1100 aaPredicted RBP20.62■□□□□ 0.89
CPSF1-207ENST00000531727 BAG3O95817 575 aa20.62■□□□□ 0.89
CPSF1-207ENST00000531727 BCRP11274 1271 aa20.62■□□□□ 0.89
CPSF1-207ENST00000531727 SH3TC2Q8TF17 1288 aa20.62■□□□□ 0.89
CPSF1-207ENST00000531727 SRRDQ9UH36 339 aa20.62■□□□□ 0.89
CPSF1-207ENST00000531727 DBNLQ9UJU6 430 aaKnown RBP20.62■□□□□ 0.89
CPSF1-207ENST00000531727 FOCADQ5VW36 1801 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms