RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 ARMC5Q96C12 935 aa19.46■□□□□ 0.71
CPSF1-205ENST00000531042 DDTLA6NHG4 134 aaPredicted RBP19.45■□□□□ 0.7
CPSF1-205ENST00000531042 RHBDL3P58872 404 aa19.45■□□□□ 0.7
CPSF1-205ENST00000531042 ATP8B2P98198 1209 aa19.45■□□□□ 0.7
CPSF1-205ENST00000531042 MOGSQ13724 837 aa19.45■□□□□ 0.7
CPSF1-205ENST00000531042 TBC1D9Q6ZT07 1266 aa19.45■□□□□ 0.7
CPSF1-205ENST00000531042 ZSCAN29Q8IWY8 852 aaPredicted RBP19.45■□□□□ 0.7
CPSF1-205ENST00000531042 SSH3Q8TE77 659 aa19.45■□□□□ 0.7
CPSF1-205ENST00000531042 NSUN4Q96CB9 384 aaKnown RBP19.45■□□□□ 0.7
CPSF1-205ENST00000531042 RBBP6Q7Z6E9 1792 aaKnown RBP19.44■□□□□ 0.7
CPSF1-205ENST00000531042 PDHXO00330 501 aa19.44■□□□□ 0.7
CPSF1-205ENST00000531042 LDHCP07864 332 aa19.44■□□□□ 0.7
CPSF1-205ENST00000531042 UQCRFS1P1P0C7P4 283 aa19.44■□□□□ 0.7
CPSF1-205ENST00000531042 MCAMP43121 646 aa19.44■□□□□ 0.7
CPSF1-205ENST00000531042 GSTO1P78417 241 aa19.44■□□□□ 0.7
CPSF1-205ENST00000531042 PICALMQ13492 652 aa19.44■□□□□ 0.7
CPSF1-205ENST00000531042 SCYL3Q8IZE3 742 aa19.44■□□□□ 0.7
CPSF1-205ENST00000531042 GPR108Q9NPR9 543 aa19.44■□□□□ 0.7
CPSF1-205ENST00000531042 ZSWIM8A7E2V4 1837 aa19.44■□□□□ 0.7
CPSF1-205ENST00000531042 POTEFA5A3E0 1075 aa19.43■□□□□ 0.7
CPSF1-205ENST00000531042 CXCL11O14625 94 aa19.43■□□□□ 0.7
CPSF1-205ENST00000531042 NPM3O75607 178 aaKnown RBP19.43■□□□□ 0.7
CPSF1-205ENST00000531042 LACTBP83111 547 aaPredicted RBP19.43■□□□□ 0.7
CPSF1-205ENST00000531042 KIF22Q14807 665 aa19.43■□□□□ 0.7
CPSF1-205ENST00000531042 C17orf99Q6UX52 265 aa19.43■□□□□ 0.7
CPSF1-205ENST00000531042 FTSJ3Q8IY81 847 aaKnown RBP19.43■□□□□ 0.7
CPSF1-205ENST00000531042 ARHGAP39Q9C0H5 1083 aa19.43■□□□□ 0.7
CPSF1-205ENST00000531042 PTCH2Q9Y6C5 1203 aa19.43■□□□□ 0.7
CPSF1-205ENST00000531042 ZBTB7BO15156 539 aaPredicted RBP19.42■□□□□ 0.7
CPSF1-205ENST00000531042 MAP4K4O95819 1239 aaPredicted RBP19.42■□□□□ 0.7
CPSF1-205ENST00000531042 SLURP2P0DP57 97 aa19.42■□□□□ 0.7
CPSF1-205ENST00000531042 RLBP1P12271 317 aa19.42■□□□□ 0.7
CPSF1-205ENST00000531042 TNNI3KQ59H18 835 aa19.42■□□□□ 0.7
CPSF1-205ENST00000531042 C1orf115Q9H7X2 142 aa19.42■□□□□ 0.7
CPSF1-205ENST00000531042 PICK1Q9NRD5 415 aa19.42■□□□□ 0.7
CPSF1-205ENST00000531042 RAI14Q9P0K7 980 aa19.42■□□□□ 0.7
CPSF1-205ENST00000531042 ZHX2Q9Y6X8 837 aa19.42■□□□□ 0.7
CPSF1-205ENST00000531042 FPGT-TNNI3KV9GXZ4 949 aa19.42■□□□□ 0.7
CPSF1-205ENST00000531042 DOCK1Q14185 1865 aa19.41■□□□□ 0.7
CPSF1-205ENST00000531042 SURF6O75683 361 aaKnown RBP19.41■□□□□ 0.7
CPSF1-205ENST00000531042 PTPRAP18433 802 aa19.41■□□□□ 0.7
CPSF1-205ENST00000531042 OS9Q13438 667 aaPredicted RBP19.41■□□□□ 0.7
CPSF1-205ENST00000531042 GPAT2Q6NUI2 795 aa19.41■□□□□ 0.7
CPSF1-205ENST00000531042 ITPRIPQ8IWB1 547 aa19.41■□□□□ 0.7
CPSF1-205ENST00000531042 LRP2BPQ9P2M1 347 aa19.41■□□□□ 0.7
CPSF1-205ENST00000531042 CPA4Q9UI42 421 aa19.41■□□□□ 0.7
CPSF1-205ENST00000531042 ADGRA2Q96PE1 1338 aa19.41■□□□□ 0.7
CPSF1-205ENST00000531042 TBC1D12O60347 775 aa19.4■□□□□ 0.7
CPSF1-205ENST00000531042 CTNND1O60716 968 aaKnown RBP19.4■□□□□ 0.7
CPSF1-205ENST00000531042 GNRH1P01148 92 aa19.4■□□□□ 0.7
CPSF1-205ENST00000531042 SLC9C1Q4G0N8 1177 aa19.4■□□□□ 0.7
CPSF1-205ENST00000531042 TTC39AQ5SRH9 613 aa19.4■□□□□ 0.7
CPSF1-205ENST00000531042 PRPF38BQ5VTL8 546 aaKnown RBP19.4■□□□□ 0.7
CPSF1-205ENST00000531042 NBPF11Q86T75 865 aa19.4■□□□□ 0.7
CPSF1-205ENST00000531042 ZNF333Q96JL9 665 aa19.4■□□□□ 0.7
CPSF1-205ENST00000531042 DBNDD2Q9BQY9 259 aa19.4■□□□□ 0.7
CPSF1-205ENST00000531042 NOP58Q9Y2X3 529 aaKnown RBP19.4■□□□□ 0.7
CPSF1-205ENST00000531042 AFG3L2Q9Y4W6 797 aa19.4■□□□□ 0.7
CPSF1-205ENST00000531042 PHIPQ8WWQ0 1821 aa19.39■□□□□ 0.7
CPSF1-205ENST00000531042 A0A0G2JLL6 359 aaPredicted RBP19.39■□□□□ 0.69
CPSF1-205ENST00000531042 CCDC158Q5M9N0 1113 aa19.39■□□□□ 0.69
CPSF1-205ENST00000531042 PRRT2Q7Z6L0 340 aaPredicted RBP19.39■□□□□ 0.69
CPSF1-205ENST00000531042 SNRKQ9NRH2 765 aa19.39■□□□□ 0.69
CPSF1-205ENST00000531042 ZBED9Q6R2W3 1325 aa19.39■□□□□ 0.69
CPSF1-205ENST00000531042 BRCA2P51587 3418 aa19.39■□□□□ 0.69
CPSF1-205ENST00000531042 COL2A1P02458 1487 aaPredicted RBP19.38■□□□□ 0.69
CPSF1-205ENST00000531042 PTPRFP10586 1907 aa19.38■□□□□ 0.69
CPSF1-205ENST00000531042 CTGFP29279 349 aa19.38■□□□□ 0.69
CPSF1-205ENST00000531042 FASTKD5Q7L8L6 764 aaKnown RBP19.38■□□□□ 0.69
CPSF1-205ENST00000531042 OSBPL5Q9H0X9 879 aaPredicted RBP19.38■□□□□ 0.69
CPSF1-205ENST00000531042 MKI67P46013 3256 aaKnown RBP19.38■□□□□ 0.69
CPSF1-205ENST00000531042 MAST2Q6P0Q8 1798 aa19.37■□□□□ 0.69
CPSF1-205ENST00000531042 SLC34A2O95436 690 aa19.37■□□□□ 0.69
CPSF1-205ENST00000531042 EN2P19622 333 aaPredicted RBP19.37■□□□□ 0.69
CPSF1-205ENST00000531042 PSMC4P43686 418 aa19.37■□□□□ 0.69
CPSF1-205ENST00000531042 PRMT2P55345 433 aa19.37■□□□□ 0.69
CPSF1-205ENST00000531042 TEX11Q8IYF3 940 aa19.37■□□□□ 0.69
CPSF1-205ENST00000531042 ZNF512BQ96KM6 892 aaPredicted RBP19.37■□□□□ 0.69
CPSF1-205ENST00000531042 PARK7Q99497 189 aaKnown RBP19.37■□□□□ 0.69
CPSF1-205ENST00000531042 TMEM106CQ9BVX2 250 aa19.37■□□□□ 0.69
CPSF1-205ENST00000531042 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.37■□□□□ 0.693e-7■■□□□ 13.9
CPSF1-205ENST00000531042 KIAA0100Q14667 2235 aaKnown RBP19.36■□□□□ 0.69
CPSF1-205ENST00000531042 FAM196BA6NMK8 535 aa19.36■□□□□ 0.69
CPSF1-205ENST00000531042 ECM2O94769 699 aaPredicted RBP19.36■□□□□ 0.69
CPSF1-205ENST00000531042 CYP2E1P05181 493 aaPredicted RBP19.36■□□□□ 0.69
CPSF1-205ENST00000531042 CYP2C8P10632 490 aa19.36■□□□□ 0.69
CPSF1-205ENST00000531042 NAA16Q6N069 864 aaPredicted RBP19.36■□□□□ 0.69
CPSF1-205ENST00000531042 SH3RF3Q8TEJ3 882 aaPredicted RBP19.36■□□□□ 0.69
CPSF1-205ENST00000531042 TRIM47Q96LD4 638 aa19.36■□□□□ 0.69
CPSF1-205ENST00000531042 NOL10Q9BSC4 688 aaKnown RBP19.36■□□□□ 0.69
CPSF1-205ENST00000531042 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.36■□□□□ 0.69
CPSF1-205ENST00000531042 MYO5AQ9Y4I1 1855 aaKnown RBP19.36■□□□□ 0.69
CPSF1-205ENST00000531042 BCRP11274 1271 aa19.35■□□□□ 0.69
CPSF1-205ENST00000531042 CEP85Q6P2H3 762 aa19.35■□□□□ 0.69
CPSF1-205ENST00000531042 GADL1Q6ZQY3 521 aa19.35■□□□□ 0.69
CPSF1-205ENST00000531042 SH3TC2Q8TF17 1288 aa19.35■□□□□ 0.69
CPSF1-205ENST00000531042 AATFQ9NY61 560 aaKnown RBP eCLIP19.35■□□□□ 0.694e-12■■■■■ 31.9
CPSF1-205ENST00000531042 SRRDQ9UH36 339 aa19.35■□□□□ 0.69
CPSF1-205ENST00000531042 DBNLQ9UJU6 430 aaKnown RBP19.35■□□□□ 0.69
CPSF1-205ENST00000531042 SLC45A1Q9Y2W3 748 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms