RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 ZSCAN29Q8IWY8 852 aaPredicted RBP25.69■■□□□ 1.7
TSPAN4-219ENST00000530404 NEUROD6Q96NK8 337 aa25.69■■□□□ 1.7
TSPAN4-219ENST00000530404 IDI2Q9BXS1 227 aa25.69■■□□□ 1.7
TSPAN4-219ENST00000530404 DDTLA6NHG4 134 aaPredicted RBP25.68■■□□□ 1.7
TSPAN4-219ENST00000530404 PHF20L1A8MW92 1017 aa25.68■■□□□ 1.7
TSPAN4-219ENST00000530404 BCAR3O75815 825 aa25.68■■□□□ 1.7
TSPAN4-219ENST00000530404 PI16Q6UXB8 463 aa25.68■■□□□ 1.7
TSPAN4-219ENST00000530404 FRAT1Q92837 279 aaPredicted RBP25.68■■□□□ 1.7
TSPAN4-219ENST00000530404 ENTPD3O75355 529 aa25.67■■□□□ 1.7
TSPAN4-219ENST00000530404 TRIM27P14373 513 aa25.67■■□□□ 1.7
TSPAN4-219ENST00000530404 PSMC4P43686 418 aa25.67■■□□□ 1.7
TSPAN4-219ENST00000530404 MTX1Q13505 466 aa25.67■■□□□ 1.7
TSPAN4-219ENST00000530404 CLUAP1Q96AJ1 413 aa25.67■■□□□ 1.7
TSPAN4-219ENST00000530404 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.67■■□□□ 1.7
TSPAN4-219ENST00000530404 AKAP2Q9Y2D5 859 aa25.67■■□□□ 1.7
TSPAN4-219ENST00000530404 MAST2Q6P0Q8 1798 aa25.67■■□□□ 1.7
TSPAN4-219ENST00000530404 MROH7-TTC4A0A0A0MT08 1334 aa25.66■■□□□ 1.7
TSPAN4-219ENST00000530404 PDS5AQ29RF7 1337 aaKnown RBP25.66■■□□□ 1.7
TSPAN4-219ENST00000530404 FOCADQ5VW36 1801 aa25.66■■□□□ 1.7
TSPAN4-219ENST00000530404 ZBTB22O15209 634 aa25.66■■□□□ 1.7
TSPAN4-219ENST00000530404 MECOMQ03112 1051 aa25.66■■□□□ 1.7
TSPAN4-219ENST00000530404 MVPQ14764 893 aaKnown RBP25.66■■□□□ 1.7
TSPAN4-219ENST00000530404 GPAT2Q6NUI2 795 aa25.66■■□□□ 1.7
TSPAN4-219ENST00000530404 ERICH6Q7L0X2 663 aa25.66■■□□□ 1.7
TSPAN4-219ENST00000530404 SCYL3Q8IZE3 742 aa25.66■■□□□ 1.7
TSPAN4-219ENST00000530404 ZNF384Q8TF68 577 aa25.66■■□□□ 1.7
TSPAN4-219ENST00000530404 TRIM47Q96LD4 638 aa25.66■■□□□ 1.7
TSPAN4-219ENST00000530404 SIPA1L1O43166 1804 aa25.65■■□□□ 1.7
TSPAN4-219ENST00000530404 CYP2C8P10632 490 aa25.65■■□□□ 1.7
TSPAN4-219ENST00000530404 SPTY2D1Q68D10 685 aaPredicted RBP25.65■■□□□ 1.7
TSPAN4-219ENST00000530404 ZHX2Q9Y6X8 837 aa25.65■■□□□ 1.7
TSPAN4-219ENST00000530404 PNMA6EA0A0J9YXQ4 647 aa25.64■■□□□ 1.7
TSPAN4-219ENST00000530404 PTPRAP18433 802 aa25.64■■□□□ 1.7
TSPAN4-219ENST00000530404 OSBPP22059 807 aa25.64■■□□□ 1.7
TSPAN4-219ENST00000530404 TBC1D9Q6ZT07 1266 aa25.64■■□□□ 1.7
TSPAN4-219ENST00000530404 CCDC84Q86UT8 332 aaPredicted RBP25.64■■□□□ 1.7
TSPAN4-219ENST00000530404 SLF2Q8IX21 1173 aa25.64■■□□□ 1.7
TSPAN4-219ENST00000530404 FAM163AQ96GL9 167 aaPredicted RBP25.64■■□□□ 1.7
TSPAN4-219ENST00000530404 PICK1Q9NRD5 415 aa25.64■■□□□ 1.7
TSPAN4-219ENST00000530404 HMG20BQ9P0W2 317 aa25.64■■□□□ 1.7
TSPAN4-219ENST00000530404 CEP290O15078 2479 aa25.63■■□□□ 1.69
TSPAN4-219ENST00000530404 CXCL11O14625 94 aa25.63■■□□□ 1.69
TSPAN4-219ENST00000530404 FMNL1O95466 1100 aaPredicted RBP25.63■■□□□ 1.69
TSPAN4-219ENST00000530404 GNRH1P01148 92 aa25.63■■□□□ 1.69
TSPAN4-219ENST00000530404 GNAI2P04899 355 aa25.63■■□□□ 1.69
TSPAN4-219ENST00000530404 ATF7IPQ6VMQ6 1270 aa25.63■■□□□ 1.69
TSPAN4-219ENST00000530404 GADL1Q6ZQY3 521 aa25.63■■□□□ 1.69
TSPAN4-219ENST00000530404 SRRDQ9UH36 339 aa25.63■■□□□ 1.69
TSPAN4-219ENST00000530404 LOC285556D6RIA3 1793 aa25.62■■□□□ 1.69
TSPAN4-219ENST00000530404 FAM196BA6NMK8 535 aa25.62■■□□□ 1.69
TSPAN4-219ENST00000530404 RHBDL3P58872 404 aa25.62■■□□□ 1.69
TSPAN4-219ENST00000530404 MTFR1Q15390 333 aa25.62■■□□□ 1.69
TSPAN4-219ENST00000530404 GORABQ5T7V8 394 aa25.62■■□□□ 1.69
TSPAN4-219ENST00000530404 PARK7Q99497 189 aaKnown RBP25.62■■□□□ 1.69
TSPAN4-219ENST00000530404 AFG3L2Q9Y4W6 797 aa25.62■■□□□ 1.69
TSPAN4-219ENST00000530404 GPR75-ASB3A0A0A6YYF3 556 aa25.61■■□□□ 1.69
TSPAN4-219ENST00000530404 A0A0G2JLL6 359 aaPredicted RBP25.61■■□□□ 1.69
TSPAN4-219ENST00000530404 IPO8O15397 1037 aaKnown RBP25.61■■□□□ 1.69
TSPAN4-219ENST00000530404 PRMT2P55345 433 aa25.61■■□□□ 1.69
TSPAN4-219ENST00000530404 PRRT2Q7Z6L0 340 aaPredicted RBP25.61■■□□□ 1.69
TSPAN4-219ENST00000530404 SPATA5Q8NB90 893 aa25.61■■□□□ 1.69
TSPAN4-219ENST00000530404 MYPNQ86TC9 1320 aa25.61■■□□□ 1.69
TSPAN4-219ENST00000530404 BCRP11274 1271 aa25.6■■□□□ 1.69
TSPAN4-219ENST00000530404 MAP3K10Q02779 954 aa25.6■■□□□ 1.69
TSPAN4-219ENST00000530404 RAET1EQ8TD07 263 aa25.6■■□□□ 1.69
TSPAN4-219ENST00000530404 ARID4AP29374 1257 aaPredicted RBP25.59■■□□□ 1.69
TSPAN4-219ENST00000530404 MCAMP43121 646 aa25.59■■□□□ 1.69
TSPAN4-219ENST00000530404 G3BP1Q13283 466 aaKnown RBP eCLIP25.59■■□□□ 1.69
TSPAN4-219ENST00000530404 TMEM57Q8N5G2 664 aa25.59■■□□□ 1.69
TSPAN4-219ENST00000530404 NSUN4Q96CB9 384 aaKnown RBP25.59■■□□□ 1.69
TSPAN4-219ENST00000530404 GCC1Q96CN9 775 aa25.59■■□□□ 1.69
TSPAN4-219ENST00000530404 RAI14Q9P0K7 980 aa25.59■■□□□ 1.69
TSPAN4-219ENST00000530404 TRIM75PA6NK02 468 aa25.58■■□□□ 1.69
TSPAN4-219ENST00000530404 HOXD10P28358 340 aa25.58■■□□□ 1.69
TSPAN4-219ENST00000530404 FASTKD5Q7L8L6 764 aaKnown RBP25.58■■□□□ 1.69
TSPAN4-219ENST00000530404 MYH1P12882 1939 aa25.58■■□□□ 1.69
TSPAN4-219ENST00000530404 CTNND1O60716 968 aaKnown RBP25.57■■□□□ 1.68
TSPAN4-219ENST00000530404 GRK4P32298 578 aa25.57■■□□□ 1.68
TSPAN4-219ENST00000530404 PRKCZQ05513 592 aa25.57■■□□□ 1.68
TSPAN4-219ENST00000530404 GABRQQ9UN88 632 aa25.57■■□□□ 1.68
TSPAN4-219ENST00000530404 HABP4Q5JVS0 413 aaKnown RBP25.56■■□□□ 1.68
TSPAN4-219ENST00000530404 SHISA4Q96DD7 197 aa25.56■■□□□ 1.68
TSPAN4-219ENST00000530404 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.56■■□□□ 1.681e-7■■■■■ 39.7
TSPAN4-219ENST00000530404 SNRKQ9NRH2 765 aa25.56■■□□□ 1.68
TSPAN4-219ENST00000530404 PCDH10Q9P2E7 1040 aa25.56■■□□□ 1.68
TSPAN4-219ENST00000530404 LDHCP07864 332 aa25.55■■□□□ 1.68
TSPAN4-219ENST00000530404 FCGRTP55899 365 aa25.55■■□□□ 1.68
TSPAN4-219ENST00000530404 GSTO1P78417 241 aa25.55■■□□□ 1.68
TSPAN4-219ENST00000530404 C1orf115Q9H7X2 142 aa25.55■■□□□ 1.68
TSPAN4-219ENST00000530404 OSBPL5Q9H0X9 879 aaPredicted RBP25.54■■□□□ 1.68
TSPAN4-219ENST00000530404 LRP2BPQ9P2M1 347 aa25.54■■□□□ 1.68
TSPAN4-219ENST00000530404 BIN2Q9UBW5 565 aaPredicted RBP25.54■■□□□ 1.68
TSPAN4-219ENST00000530404 TREML2Q5T2D2 321 aa25.53■■□□□ 1.68
TSPAN4-219ENST00000530404 ZKSCAN2Q63HK3 967 aa25.53■■□□□ 1.68
TSPAN4-219ENST00000530404 TEX11Q8IYF3 940 aa25.53■■□□□ 1.68
TSPAN4-219ENST00000530404 SH3RF3Q8TEJ3 882 aaPredicted RBP25.53■■□□□ 1.68
TSPAN4-219ENST00000530404 TBC1D12O60347 775 aa25.52■■□□□ 1.68
TSPAN4-219ENST00000530404 UQCRFS1P1P0C7P4 283 aa25.52■■□□□ 1.68
TSPAN4-219ENST00000530404 CCL5P13501 91 aa25.52■■□□□ 1.68
TSPAN4-219ENST00000530404 RRP1BQ14684 758 aaKnown RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms