RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 SEC31AO94979 1220 aaKnown RBP13.85□□□□□ -0.19
FGFR1-227ENST00000526570 PRPF4BQ13523 1007 aaKnown RBP13.85□□□□□ -0.19
FGFR1-227ENST00000526570 IQCA1Q86XH1 822 aa13.85□□□□□ -0.19
FGFR1-227ENST00000526570 NUF2Q9BZD4 464 aa13.85□□□□□ -0.19
FGFR1-227ENST00000526570 PIK3C2GO75747 1445 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 DYTNA2CJ06 578 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 ATP8B1O43520 1251 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 CYLC1P35663 651 aaPredicted RBP13.84□□□□□ -0.19
FGFR1-227ENST00000526570 ZNF76P36508 570 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 GNGT1P63211 74 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 LMBR1LQ6UX01 489 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 LCA5Q86VQ0 697 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 FBXO18Q8NFZ0 1043 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 STK38LQ9Y2H1 464 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 ALDH1L1O75891 902 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 FAM98CQ17RN3 349 aaKnown RBP13.84□□□□□ -0.19
FGFR1-227ENST00000526570 BAG1Q99933 345 aaPredicted RBP13.84□□□□□ -0.19
FGFR1-227ENST00000526570 RASAL2Q9UJF2 1139 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 ERCC6L2Q5T890 1561 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 MGEA5O60502 916 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 CCT5P48643 541 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 NCBP1Q09161 790 aaKnown RBP13.84□□□□□ -0.19
FGFR1-227ENST00000526570 SLC4A8Q2Y0W8 1093 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 RBM26Q5T8P6 1007 aaKnown RBP13.84□□□□□ -0.19
FGFR1-227ENST00000526570 IFT81Q8WYA0 676 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 WASF1Q92558 559 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 DTNBP1Q96EV8 351 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 SCOCQ9UIL1 159 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 FAN1Q9Y2M0 1017 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 TLDC2A0PJX2 215 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 LMOD1P29536 600 aaPredicted RBP13.84□□□□□ -0.19
FGFR1-227ENST00000526570 NAA16Q6N069 864 aaPredicted RBP13.84□□□□□ -0.19
FGFR1-227ENST00000526570 CXorf38Q8TB03 319 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 EXOC4Q96A65 974 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 ZHX3Q9H4I2 956 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 ARHGEF10O15013 1369 aa13.84□□□□□ -0.19
FGFR1-227ENST00000526570 GADD45BO75293 160 aaPredicted RBP13.83□□□□□ -0.19
FGFR1-227ENST00000526570 KIF2CQ99661 725 aa13.83□□□□□ -0.19
FGFR1-227ENST00000526570 YIPF3Q9GZM5 350 aa13.83□□□□□ -0.19
FGFR1-227ENST00000526570 PALMDQ9NP74 551 aa13.83□□□□□ -0.19
FGFR1-227ENST00000526570 KDM5DQ9BY66 1539 aa13.83□□□□□ -0.19
FGFR1-227ENST00000526570 TTC36A6NLP5 189 aa13.83□□□□□ -0.2
FGFR1-227ENST00000526570 EFCAB8A8MWE9 144 aa13.83□□□□□ -0.2
FGFR1-227ENST00000526570 CHUKO15111 745 aa13.83□□□□□ -0.2
FGFR1-227ENST00000526570 IL13P35225 146 aa13.83□□□□□ -0.2
FGFR1-227ENST00000526570 LRMPQ12912 555 aa13.83□□□□□ -0.2
FGFR1-227ENST00000526570 IFI16Q16666 785 aaKnown RBP13.83□□□□□ -0.2
FGFR1-227ENST00000526570 GKAP1Q5VSY0 366 aaPredicted RBP13.83□□□□□ -0.2
FGFR1-227ENST00000526570 ANTXR1Q9H6X2 564 aa13.83□□□□□ -0.2
FGFR1-227ENST00000526570 PDE11AQ9HCR9 933 aa13.83□□□□□ -0.2
FGFR1-227ENST00000526570 KCNK9Q9NPC2 374 aa13.83□□□□□ -0.2
FGFR1-227ENST00000526570 FAM71BQ8TC56 605 aa13.83□□□□□ -0.2
FGFR1-227ENST00000526570 CDCA7Q9BWT1 371 aaPredicted RBP13.83□□□□□ -0.2
FGFR1-227ENST00000526570 HSP90AA4PQ58FG1 418 aa13.83□□□□□ -0.2
FGFR1-227ENST00000526570 RHPN1Q8TCX5 695 aa13.83□□□□□ -0.2
FGFR1-227ENST00000526570 GPT2Q8TD30 523 aa13.83□□□□□ -0.2
FGFR1-227ENST00000526570 INTS4Q96HW7 963 aaKnown RBP13.83□□□□□ -0.2
FGFR1-227ENST00000526570 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.83□□□□□ -0.2
FGFR1-227ENST00000526570 SEC63Q9UGP8 760 aaKnown RBP13.83□□□□□ -0.2
FGFR1-227ENST00000526570 WWC3Q9ULE0 1092 aa13.83□□□□□ -0.2
FGFR1-227ENST00000526570 CLTAP09496 248 aa13.83□□□□□ -0.2
FGFR1-227ENST00000526570 POLD1P28340 1107 aa13.83□□□□□ -0.2
FGFR1-227ENST00000526570 TTC19Q6DKK2 380 aaPredicted RBP13.83□□□□□ -0.2
FGFR1-227ENST00000526570 SELENOOQ9BVL4 669 aa13.83□□□□□ -0.2
FGFR1-227ENST00000526570 NYXQ9GZU5 481 aa13.83□□□□□ -0.2
FGFR1-227ENST00000526570 CEP131Q9UPN4 1083 aa13.83□□□□□ -0.2
FGFR1-227ENST00000526570 GNPATO15228 680 aa13.82□□□□□ -0.2
FGFR1-227ENST00000526570 ZNF131P52739 623 aa13.82□□□□□ -0.2
FGFR1-227ENST00000526570 PRPF31Q8WWY3 499 aaKnown RBP13.82□□□□□ -0.2
FGFR1-227ENST00000526570 IQSEC3Q9UPP2 1182 aaPredicted RBP13.82□□□□□ -0.2
FGFR1-227ENST00000526570 GCC2Q8IWJ2 1684 aa13.82□□□□□ -0.2
FGFR1-227ENST00000526570 GFAPP14136 432 aa13.82□□□□□ -0.2
FGFR1-227ENST00000526570 ATP2A2P16615 1042 aaKnown RBP13.82□□□□□ -0.2
FGFR1-227ENST00000526570 RASSF2P50749 326 aa13.82□□□□□ -0.2
FGFR1-227ENST00000526570 CWF19L2Q2TBE0 894 aaKnown RBP13.82□□□□□ -0.2
FGFR1-227ENST00000526570 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.82□□□□□ -0.2
FGFR1-227ENST00000526570 PLEKHA4Q9H4M7 779 aa13.82□□□□□ -0.2
FGFR1-227ENST00000526570 PARP3Q9Y6F1 533 aa13.82□□□□□ -0.2
FGFR1-227ENST00000526570 SCINQ9Y6U3 715 aa13.82□□□□□ -0.2
FGFR1-227ENST00000526570 LDHCP07864 332 aa13.82□□□□□ -0.2
FGFR1-227ENST00000526570 HNRNPCP07910 306 aaKnown RBP eCLIP13.82□□□□□ -0.23e-10■■■■■ 30.4
FGFR1-227ENST00000526570 SDSP20132 328 aa13.82□□□□□ -0.2
FGFR1-227ENST00000526570 ZSCAN16Q9H4T2 348 aaPredicted RBP13.82□□□□□ -0.2
FGFR1-227ENST00000526570 NKIRAS1Q9NYS0 192 aa13.82□□□□□ -0.2
FGFR1-227ENST00000526570 IBTKQ9P2D0 1353 aaPredicted RBP13.82□□□□□ -0.2
FGFR1-227ENST00000526570 CHCHD3Q9NX63 227 aaKnown RBP13.82□□□□□ -0.2
FGFR1-227ENST00000526570 EFCAB6Q5THR3 1501 aa13.81□□□□□ -0.2
FGFR1-227ENST00000526570 EIF3CLB5ME19 914 aaKnown RBP13.81□□□□□ -0.2
FGFR1-227ENST00000526570 KRT86O43790 486 aa13.81□□□□□ -0.2
FGFR1-227ENST00000526570 UQCRFS1P1P0C7P4 283 aa13.81□□□□□ -0.2
FGFR1-227ENST00000526570 SDCCAG8Q86SQ7 713 aaPredicted RBP13.81□□□□□ -0.2
FGFR1-227ENST00000526570 EIF3CQ99613 913 aaKnown RBP13.81□□□□□ -0.2
FGFR1-227ENST00000526570 CAPS2Q9BXY5 557 aa13.81□□□□□ -0.2
FGFR1-227ENST00000526570 USP16Q9Y5T5 823 aa13.81□□□□□ -0.2
FGFR1-227ENST00000526570 NOP2P46087 812 aaKnown RBP13.81□□□□□ -0.2
FGFR1-227ENST00000526570 FBXO38Q6PIJ6 1188 aa13.81□□□□□ -0.2
FGFR1-227ENST00000526570 PER1O15534 1290 aaPredicted RBP13.81□□□□□ -0.2
FGFR1-227ENST00000526570 TRIM21P19474 475 aaKnown RBP13.81□□□□□ -0.2
FGFR1-227ENST00000526570 SMC1BQ8NDV3 1235 aa13.81□□□□□ -0.2
FGFR1-227ENST00000526570 USP21Q9UK80 565 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms