RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 GRM1Q13255 1194 aa15.51■□□□□ 0.07
VEGFA-224ENST00000523873 PAXIP1Q6ZW49 1069 aaPredicted RBP15.51■□□□□ 0.07
VEGFA-224ENST00000523873 CENPQQ7L2Z9 268 aaPredicted RBP15.51■□□□□ 0.07
VEGFA-224ENST00000523873 RIOK1Q9BRS2 568 aaKnown RBP15.51■□□□□ 0.07
VEGFA-224ENST00000523873 ARMT1Q9H993 441 aa15.51■□□□□ 0.07
VEGFA-224ENST00000523873 ANGEL1Q9UNK9 670 aaKnown RBP15.51■□□□□ 0.07
VEGFA-224ENST00000523873 RPAP1Q9BWH6 1393 aaPredicted RBP15.5■□□□□ 0.07
VEGFA-224ENST00000523873 DDTLA6NHG4 134 aaPredicted RBP15.5■□□□□ 0.07
VEGFA-224ENST00000523873 ENTPD3O75355 529 aa15.5■□□□□ 0.07
VEGFA-224ENST00000523873 USP2O75604 605 aaPredicted RBP15.5■□□□□ 0.07
VEGFA-224ENST00000523873 SLC4A8Q2Y0W8 1093 aa15.5■□□□□ 0.07
VEGFA-224ENST00000523873 SUPT20HL1Q3ZLR7 823 aa15.5■□□□□ 0.07
VEGFA-224ENST00000523873 ZSCAN29Q8IWY8 852 aaPredicted RBP15.5■□□□□ 0.07
VEGFA-224ENST00000523873 OSBPL5Q9H0X9 879 aaPredicted RBP15.5■□□□□ 0.07
VEGFA-224ENST00000523873 OSBPL3Q9H4L5 887 aa15.5■□□□□ 0.07
VEGFA-224ENST00000523873 FLT1P17948 1338 aa15.49■□□□□ 0.07
VEGFA-224ENST00000523873 DOCK1Q14185 1865 aa15.49■□□□□ 0.07
VEGFA-224ENST00000523873 RASSF10A6NK89 507 aa15.49■□□□□ 0.07
VEGFA-224ENST00000523873 TRIM6-TRIM34B2RNG4 842 aa15.49■□□□□ 0.07
VEGFA-224ENST00000523873 RNF113AO15541 343 aaKnown RBP15.49■□□□□ 0.07
VEGFA-224ENST00000523873 PRKAB2O43741 272 aa15.49■□□□□ 0.07
VEGFA-224ENST00000523873 MBD4O95243 580 aa15.49■□□□□ 0.07
VEGFA-224ENST00000523873 PLCG2P16885 1265 aa15.49■□□□□ 0.07
VEGFA-224ENST00000523873 UBE3CQ15386 1083 aa15.49■□□□□ 0.07
VEGFA-224ENST00000523873 DEFB115Q30KQ5 88 aa15.49■□□□□ 0.07
VEGFA-224ENST00000523873 ZSCAN25Q6NSZ9 544 aa15.49■□□□□ 0.07
VEGFA-224ENST00000523873 CYP4F22Q6NT55 531 aa15.49■□□□□ 0.07
VEGFA-224ENST00000523873 MIGA2Q7L4E1 593 aa15.49■□□□□ 0.07
VEGFA-224ENST00000523873 DNAJC5GQ8N7S2 189 aa15.49■□□□□ 0.07
VEGFA-224ENST00000523873 RILPL2Q969X0 211 aa15.49■□□□□ 0.07
VEGFA-224ENST00000523873 PUS7LQ9H0K6 701 aaKnown RBP15.49■□□□□ 0.07
VEGFA-224ENST00000523873 SAP30BPQ9UHR5 308 aaKnown RBP15.49■□□□□ 0.07
VEGFA-224ENST00000523873 LAMB1P07942 1786 aa15.49■□□□□ 0.07
VEGFA-224ENST00000523873 M0R2C6 588 aa15.48■□□□□ 0.07
VEGFA-224ENST00000523873 USP5P45974 858 aa15.48■□□□□ 0.07
VEGFA-224ENST00000523873 ARMC9Q7Z3E5 817 aa15.48■□□□□ 0.07
VEGFA-224ENST00000523873 SDR42E1Q8WUS8 393 aa15.48■□□□□ 0.07
VEGFA-224ENST00000523873 OSBP2Q969R2 916 aa15.48■□□□□ 0.07
VEGFA-224ENST00000523873 EVI5LQ96CN4 794 aa15.48■□□□□ 0.07
VEGFA-224ENST00000523873 SEC62Q99442 399 aaKnown RBP15.48■□□□□ 0.07
VEGFA-224ENST00000523873 FAM196BA6NMK8 535 aa15.47■□□□□ 0.07
VEGFA-224ENST00000523873 PPP1R12BO60237 982 aaPredicted RBP15.47■□□□□ 0.07
VEGFA-224ENST00000523873 VEGFBP49765 207 aa15.47■□□□□ 0.07
VEGFA-224ENST00000523873 FKBP1BP68106 108 aa15.47■□□□□ 0.07
VEGFA-224ENST00000523873 TTC22Q5TAA0 569 aa15.47■□□□□ 0.07
VEGFA-224ENST00000523873 TMED8Q6PL24 325 aaPredicted RBP15.47■□□□□ 0.07
VEGFA-224ENST00000523873 APPBP2Q92624 585 aa15.47■□□□□ 0.07
VEGFA-224ENST00000523873 KLRG1Q96E93 195 aa15.47■□□□□ 0.07
VEGFA-224ENST00000523873 CSRNP1Q96S65 589 aa15.47■□□□□ 0.07
VEGFA-224ENST00000523873 PHIPQ8WWQ0 1821 aa15.47■□□□□ 0.07
VEGFA-224ENST00000523873 ATRNL1Q5VV63 1379 aa15.47■□□□□ 0.07
VEGFA-224ENST00000523873 THSD7BQ9C0I4 1608 aa15.46■□□□□ 0.07
VEGFA-224ENST00000523873 COL2A1P02458 1487 aaPredicted RBP15.46■□□□□ 0.07
VEGFA-224ENST00000523873 NPM3O75607 178 aaKnown RBP15.46■□□□□ 0.07
VEGFA-224ENST00000523873 GSPT1P15170 499 aaKnown RBP15.46■□□□□ 0.07
VEGFA-224ENST00000523873 RGMBQ6NW40 437 aa15.46■□□□□ 0.07
VEGFA-224ENST00000523873 AIDAQ96BJ3 306 aa15.46■□□□□ 0.07
VEGFA-224ENST00000523873 CLMNQ96JQ2 1002 aa15.46■□□□□ 0.07
VEGFA-224ENST00000523873 CAPNS2Q96L46 248 aa15.46■□□□□ 0.07
VEGFA-224ENST00000523873 PPP4R2Q9NY27 417 aa15.46■□□□□ 0.07
VEGFA-224ENST00000523873 PALD1Q9ULE6 856 aa15.46■□□□□ 0.07
VEGFA-224ENST00000523873 AOC2O75106 756 aa15.45■□□□□ 0.06
VEGFA-224ENST00000523873 ZFYP08048 801 aaPredicted RBP15.45■□□□□ 0.06
VEGFA-224ENST00000523873 IREB2P48200 963 aaKnown RBP15.45■□□□□ 0.06
VEGFA-224ENST00000523873 ZNF157P51786 506 aaPredicted RBP15.45■□□□□ 0.06
VEGFA-224ENST00000523873 EVX2Q03828 476 aa15.45■□□□□ 0.06
VEGFA-224ENST00000523873 MAP3K11Q16584 847 aa15.45■□□□□ 0.06
VEGFA-224ENST00000523873 ZMYM1Q5SVZ6 1142 aa15.45■□□□□ 0.06
VEGFA-224ENST00000523873 LDLRAD1Q5T700 205 aa15.45■□□□□ 0.06
VEGFA-224ENST00000523873 CCDC129Q6ZRS4 1044 aa15.45■□□□□ 0.06
VEGFA-224ENST00000523873 CRNKL1Q9BZJ0 848 aaKnown RBP15.45■□□□□ 0.06
VEGFA-224ENST00000523873 WDR33Q9C0J8 1336 aaKnown RBP15.44■□□□□ 0.06
VEGFA-224ENST00000523873 FAM155AB1AL88 458 aaPredicted RBP15.44■□□□□ 0.06
VEGFA-224ENST00000523873 GPAA1O43292 621 aa15.44■□□□□ 0.06
VEGFA-224ENST00000523873 INPP5BP32019 993 aa15.44■□□□□ 0.06
VEGFA-224ENST00000523873 MKRN3Q13064 507 aaKnown RBP15.44■□□□□ 0.06
VEGFA-224ENST00000523873 DCAF15Q66K64 600 aa15.44■□□□□ 0.06
VEGFA-224ENST00000523873 RASAL3Q86YV0 1011 aa15.44■□□□□ 0.06
VEGFA-224ENST00000523873 CERS3Q8IU89 383 aa15.44■□□□□ 0.06
VEGFA-224ENST00000523873 FAM227BQ96M60 508 aa15.44■□□□□ 0.06
VEGFA-224ENST00000523873 WRNIP1Q96S55 665 aa15.44■□□□□ 0.06
VEGFA-224ENST00000523873 ZIC5Q96T25 663 aa15.44■□□□□ 0.06
VEGFA-224ENST00000523873 ZNF341Q9BYN7 854 aa15.44■□□□□ 0.06
VEGFA-224ENST00000523873 SLC4A4Q9Y6R1 1079 aa15.44■□□□□ 0.06
VEGFA-224ENST00000523873 PTPRFP10586 1907 aa15.44■□□□□ 0.06
VEGFA-224ENST00000523873 A0A0D9SFI3 127 aa15.43■□□□□ 0.06
VEGFA-224ENST00000523873 CYP2D6P10635 497 aa15.43■□□□□ 0.06
VEGFA-224ENST00000523873 SDSP20132 328 aa15.43■□□□□ 0.06
VEGFA-224ENST00000523873 MAP3K9P80192 1104 aa15.43■□□□□ 0.06
VEGFA-224ENST00000523873 NMIQ13287 307 aaPredicted RBP15.43■□□□□ 0.06
VEGFA-224ENST00000523873 LRRFIP1Q32MZ4 808 aaKnown RBP15.43■□□□□ 0.06
VEGFA-224ENST00000523873 ERICH6BQ5W0A0 696 aa15.43■□□□□ 0.06
VEGFA-224ENST00000523873 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.43■□□□□ 0.06
VEGFA-224ENST00000523873 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.43■□□□□ 0.062e-42■□□□□ 11.1
VEGFA-224ENST00000523873 ZKSCAN4Q969J2 545 aaPredicted RBP15.43■□□□□ 0.06
VEGFA-224ENST00000523873 HHIPL1Q96JK4 782 aa15.43■□□□□ 0.06
VEGFA-224ENST00000523873 STRBPQ96SI9 672 aaKnown RBP15.43■□□□□ 0.06
VEGFA-224ENST00000523873 ELP3Q9H9T3 547 aa15.43■□□□□ 0.06
VEGFA-224ENST00000523873 DCP1AQ9NPI6 582 aaPredicted RBP15.43■□□□□ 0.06
VEGFA-224ENST00000523873 CYP2D7A0A087X1C5 515 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms