RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 PTCH2Q9Y6C5 1203 aa24.24■■□□□ 1.47
PABPC1-215ENST00000520804 PDHXO00330 501 aa24.23■■□□□ 1.47
PABPC1-215ENST00000520804 ARID4AP29374 1257 aaPredicted RBP24.23■■□□□ 1.47
PABPC1-215ENST00000520804 HNRNPUQ00839 825 aaKnown RBP eCLIP24.23■■□□□ 1.47
PABPC1-215ENST00000520804 MOGSQ13724 837 aa24.23■■□□□ 1.47
PABPC1-215ENST00000520804 KIF22Q14807 665 aa24.23■■□□□ 1.47
PABPC1-215ENST00000520804 C17orf99Q6UX52 265 aa24.23■■□□□ 1.47
PABPC1-215ENST00000520804 PI16Q6UXB8 463 aa24.23■■□□□ 1.47
PABPC1-215ENST00000520804 ARHGAP39Q9C0H5 1083 aa24.23■■□□□ 1.47
PABPC1-215ENST00000520804 ZSWIM8A7E2V4 1837 aa24.22■■□□□ 1.47
PABPC1-215ENST00000520804 DDTLA6NHG4 134 aaPredicted RBP24.22■■□□□ 1.47
PABPC1-215ENST00000520804 CXCL11O14625 94 aa24.22■■□□□ 1.47
PABPC1-215ENST00000520804 RHBDL3P58872 404 aa24.22■■□□□ 1.47
PABPC1-215ENST00000520804 PICALMQ13492 652 aa24.22■■□□□ 1.47
PABPC1-215ENST00000520804 SCYL3Q8IZE3 742 aa24.22■■□□□ 1.47
PABPC1-215ENST00000520804 ZNF333Q96JL9 665 aa24.22■■□□□ 1.47
PABPC1-215ENST00000520804 CENPFP49454 3210 aa24.21■■□□□ 1.47
PABPC1-215ENST00000520804 GSTO1P78417 241 aa24.21■■□□□ 1.47
PABPC1-215ENST00000520804 POLA2Q14181 598 aa24.21■■□□□ 1.47
PABPC1-215ENST00000520804 SLC9C1Q4G0N8 1177 aa24.21■■□□□ 1.47
PABPC1-215ENST00000520804 TBC1D9Q6ZT07 1266 aa24.21■■□□□ 1.47
PABPC1-215ENST00000520804 MIER1Q8N108 512 aa24.21■■□□□ 1.47
PABPC1-215ENST00000520804 NSUN4Q96CB9 384 aaKnown RBP24.21■■□□□ 1.47
PABPC1-215ENST00000520804 PICK1Q9NRD5 415 aa24.21■■□□□ 1.47
PABPC1-215ENST00000520804 ADGRA2Q96PE1 1338 aa24.2■■□□□ 1.46
PABPC1-215ENST00000520804 NPM3O75607 178 aaKnown RBP24.2■■□□□ 1.46
PABPC1-215ENST00000520804 GNRH1P01148 92 aa24.2■■□□□ 1.46
PABPC1-215ENST00000520804 LDHCP07864 332 aa24.2■■□□□ 1.46
PABPC1-215ENST00000520804 UQCRFS1P1P0C7P4 283 aa24.2■■□□□ 1.46
PABPC1-215ENST00000520804 MCAMP43121 646 aa24.2■■□□□ 1.46
PABPC1-215ENST00000520804 NBPF11Q86T75 865 aa24.2■■□□□ 1.46
PABPC1-215ENST00000520804 CPA4Q9UI42 421 aa24.2■■□□□ 1.46
PABPC1-215ENST00000520804 MAP4K4O95819 1239 aaPredicted RBP24.19■■□□□ 1.46
PABPC1-215ENST00000520804 SLURP2P0DP57 97 aa24.19■■□□□ 1.46
PABPC1-215ENST00000520804 PTPRAP18433 802 aa24.19■■□□□ 1.46
PABPC1-215ENST00000520804 ATP8B2P98198 1209 aa24.19■■□□□ 1.46
PABPC1-215ENST00000520804 SSH3Q8TE77 659 aa24.19■■□□□ 1.46
PABPC1-215ENST00000520804 GPR108Q9NPR9 543 aa24.19■■□□□ 1.46
PABPC1-215ENST00000520804 RAI14Q9P0K7 980 aa24.19■■□□□ 1.46
PABPC1-215ENST00000520804 ZHX2Q9Y6X8 837 aa24.19■■□□□ 1.46
PABPC1-215ENST00000520804 PRMT2P55345 433 aa24.18■■□□□ 1.46
PABPC1-215ENST00000520804 GPAT2Q6NUI2 795 aa24.18■■□□□ 1.46
PABPC1-215ENST00000520804 AFG3L2Q9Y4W6 797 aa24.18■■□□□ 1.46
PABPC1-215ENST00000520804 A0A0G2JLL6 359 aaPredicted RBP24.17■■□□□ 1.46
PABPC1-215ENST00000520804 CTNND1O60716 968 aaKnown RBP24.17■■□□□ 1.46
PABPC1-215ENST00000520804 EN2P19622 333 aaPredicted RBP24.17■■□□□ 1.46
PABPC1-215ENST00000520804 TNNI3KQ59H18 835 aa24.17■■□□□ 1.46
PABPC1-215ENST00000520804 PRRT2Q7Z6L0 340 aaPredicted RBP24.17■■□□□ 1.46
PABPC1-215ENST00000520804 FTSJ3Q8IY81 847 aaKnown RBP24.17■■□□□ 1.46
PABPC1-215ENST00000520804 PARK7Q99497 189 aaKnown RBP24.17■■□□□ 1.46
PABPC1-215ENST00000520804 TMEM106CQ9BVX2 250 aa24.17■■□□□ 1.46
PABPC1-215ENST00000520804 FPGT-TNNI3KV9GXZ4 949 aa24.17■■□□□ 1.46
PABPC1-215ENST00000520804 DOCK1Q14185 1865 aa24.17■■□□□ 1.46
PABPC1-215ENST00000520804 TBC1D12O60347 775 aa24.16■■□□□ 1.46
PABPC1-215ENST00000520804 CTGFP29279 349 aa24.16■■□□□ 1.46
PABPC1-215ENST00000520804 FASTKD5Q7L8L6 764 aaKnown RBP24.16■■□□□ 1.46
PABPC1-215ENST00000520804 C1orf115Q9H7X2 142 aa24.16■■□□□ 1.46
PABPC1-215ENST00000520804 LRP2BPQ9P2M1 347 aa24.16■■□□□ 1.46
PABPC1-215ENST00000520804 SURF6O75683 361 aaKnown RBP24.15■■□□□ 1.46
PABPC1-215ENST00000520804 ECM2O94769 699 aaPredicted RBP24.15■■□□□ 1.46
PABPC1-215ENST00000520804 PSMC4P43686 418 aa24.15■■□□□ 1.46
PABPC1-215ENST00000520804 OS9Q13438 667 aaPredicted RBP24.15■■□□□ 1.46
PABPC1-215ENST00000520804 DBNDD2Q9BQY9 259 aa24.15■■□□□ 1.46
PABPC1-215ENST00000520804 PHIPQ8WWQ0 1821 aa24.14■■□□□ 1.46
PABPC1-215ENST00000520804 COL2A1P02458 1487 aaPredicted RBP24.14■■□□□ 1.46
PABPC1-215ENST00000520804 KIAA0100Q14667 2235 aaKnown RBP24.14■■□□□ 1.46
PABPC1-215ENST00000520804 BRCA2P51587 3418 aa24.14■■□□□ 1.46
PABPC1-215ENST00000520804 ZBTB7BO15156 539 aaPredicted RBP24.14■■□□□ 1.45
PABPC1-215ENST00000520804 CYP2C8P10632 490 aa24.14■■□□□ 1.45
PABPC1-215ENST00000520804 RLBP1P12271 317 aa24.14■■□□□ 1.45
PABPC1-215ENST00000520804 CCDC158Q5M9N0 1113 aa24.14■■□□□ 1.45
PABPC1-215ENST00000520804 TTC39AQ5SRH9 613 aa24.14■■□□□ 1.45
PABPC1-215ENST00000520804 ITPRIPQ8IWB1 547 aa24.14■■□□□ 1.45
PABPC1-215ENST00000520804 SH3TC2Q8TF17 1288 aa24.14■■□□□ 1.45
PABPC1-215ENST00000520804 TRIM47Q96LD4 638 aa24.14■■□□□ 1.45
PABPC1-215ENST00000520804 OSBPL5Q9H0X9 879 aaPredicted RBP24.14■■□□□ 1.45
PABPC1-215ENST00000520804 BCRP11274 1271 aa24.13■■□□□ 1.45
PABPC1-215ENST00000520804 DIEXFQ68CQ4 756 aaKnown RBP24.13■■□□□ 1.45
PABPC1-215ENST00000520804 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.13■■□□□ 1.45
PABPC1-215ENST00000520804 SNRKQ9NRH2 765 aa24.13■■□□□ 1.45
PABPC1-215ENST00000520804 SRRDQ9UH36 339 aa24.13■■□□□ 1.45
PABPC1-215ENST00000520804 NOP58Q9Y2X3 529 aaKnown RBP24.13■■□□□ 1.45
PABPC1-215ENST00000520804 PTPRFP10586 1907 aa24.13■■□□□ 1.45
PABPC1-215ENST00000520804 FMNL1O95466 1100 aaPredicted RBP24.12■■□□□ 1.45
PABPC1-215ENST00000520804 OSBPP22059 807 aa24.12■■□□□ 1.45
PABPC1-215ENST00000520804 HOXD10P28358 340 aa24.12■■□□□ 1.45
PABPC1-215ENST00000520804 SLC4A8Q2Y0W8 1093 aa24.12■■□□□ 1.45
PABPC1-215ENST00000520804 GADL1Q6ZQY3 521 aa24.12■■□□□ 1.45
PABPC1-215ENST00000520804 TEX11Q8IYF3 940 aa24.12■■□□□ 1.45
PABPC1-215ENST00000520804 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.12■■□□□ 1.45
PABPC1-215ENST00000520804 SLC45A1Q9Y2W3 748 aa24.12■■□□□ 1.45
PABPC1-215ENST00000520804 MAST2Q6P0Q8 1798 aa24.11■■□□□ 1.45
PABPC1-215ENST00000520804 FAM196BA6NMK8 535 aa24.11■■□□□ 1.45
PABPC1-215ENST00000520804 NAA16Q6N069 864 aaPredicted RBP24.11■■□□□ 1.45
PABPC1-215ENST00000520804 SH3RF3Q8TEJ3 882 aaPredicted RBP24.11■■□□□ 1.45
PABPC1-215ENST00000520804 ZNF512BQ96KM6 892 aaPredicted RBP24.11■■□□□ 1.45
PABPC1-215ENST00000520804 NOL10Q9BSC4 688 aaKnown RBP24.11■■□□□ 1.45
PABPC1-215ENST00000520804 TRIM75PA6NK02 468 aa24.1■■□□□ 1.45
PABPC1-215ENST00000520804 MYCP01106 439 aaPredicted RBP24.1■■□□□ 1.45
PABPC1-215ENST00000520804 CYP2E1P05181 493 aaPredicted RBP24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms