RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 DDTLA6NHG4 134 aaPredicted RBP15.35■□□□□ 0.05
CSMD1-205ENST00000519623 SLURP2P0DP57 97 aa15.35■□□□□ 0.05
CSMD1-205ENST00000519623 RHBDL3P58872 404 aa15.35■□□□□ 0.05
CSMD1-205ENST00000519623 GORABQ5T7V8 394 aa15.35■□□□□ 0.05
CSMD1-205ENST00000519623 C17orf99Q6UX52 265 aa15.35■□□□□ 0.05
CSMD1-205ENST00000519623 ANKRD23Q86SG2 305 aa15.35■□□□□ 0.05
CSMD1-205ENST00000519623 ARMC5Q96C12 935 aa15.35■□□□□ 0.05
CSMD1-205ENST00000519623 NSUN4Q96CB9 384 aaKnown RBP15.35■□□□□ 0.05
CSMD1-205ENST00000519623 POTEFA5A3E0 1075 aa15.34■□□□□ 0.05
CSMD1-205ENST00000519623 CXCL11O14625 94 aa15.34■□□□□ 0.05
CSMD1-205ENST00000519623 ZBTB7BO15156 539 aaPredicted RBP15.34■□□□□ 0.05
CSMD1-205ENST00000519623 RLBP1P12271 317 aa15.34■□□□□ 0.05
CSMD1-205ENST00000519623 MCAMP43121 646 aa15.34■□□□□ 0.05
CSMD1-205ENST00000519623 ARHGEF6Q15052 776 aa15.34■□□□□ 0.05
CSMD1-205ENST00000519623 ARHGAP39Q9C0H5 1083 aa15.34■□□□□ 0.05
CSMD1-205ENST00000519623 GPR108Q9NPR9 543 aa15.34■□□□□ 0.05
CSMD1-205ENST00000519623 PDHXO00330 501 aa15.33■□□□□ 0.04
CSMD1-205ENST00000519623 NPM3O75607 178 aaKnown RBP15.33■□□□□ 0.04
CSMD1-205ENST00000519623 LDHCP07864 332 aa15.33■□□□□ 0.04
CSMD1-205ENST00000519623 UQCRFS1P1P0C7P4 283 aa15.33■□□□□ 0.04
CSMD1-205ENST00000519623 LACTBP83111 547 aaPredicted RBP15.33■□□□□ 0.04
CSMD1-205ENST00000519623 ZSCAN29Q8IWY8 852 aaPredicted RBP15.33■□□□□ 0.04
CSMD1-205ENST00000519623 CENPFP49454 3210 aa15.33■□□□□ 0.04
CSMD1-205ENST00000519623 DOCK2Q92608 1830 aa15.32■□□□□ 0.04
CSMD1-205ENST00000519623 MAP4K4O95819 1239 aaPredicted RBP15.32■□□□□ 0.04
CSMD1-205ENST00000519623 PTPRAP18433 802 aa15.32■□□□□ 0.04
CSMD1-205ENST00000519623 GSTO1P78417 241 aa15.32■□□□□ 0.04
CSMD1-205ENST00000519623 PICALMQ13492 652 aa15.32■□□□□ 0.04
CSMD1-205ENST00000519623 GPAT2Q6NUI2 795 aa15.32■□□□□ 0.04
CSMD1-205ENST00000519623 SCYL3Q8IZE3 742 aa15.32■□□□□ 0.04
CSMD1-205ENST00000519623 C1orf115Q9H7X2 142 aa15.32■□□□□ 0.04
CSMD1-205ENST00000519623 NOP58Q9Y2X3 529 aaKnown RBP15.32■□□□□ 0.04
CSMD1-205ENST00000519623 PTCH2Q9Y6C5 1203 aa15.32■□□□□ 0.04
CSMD1-205ENST00000519623 ZHX2Q9Y6X8 837 aa15.32■□□□□ 0.04
CSMD1-205ENST00000519623 ADGRA2Q96PE1 1338 aa15.32■□□□□ 0.04
CSMD1-205ENST00000519623 TBC1D12O60347 775 aa15.31■□□□□ 0.04
CSMD1-205ENST00000519623 CTNND1O60716 968 aaKnown RBP15.31■□□□□ 0.04
CSMD1-205ENST00000519623 SURF6O75683 361 aaKnown RBP15.31■□□□□ 0.04
CSMD1-205ENST00000519623 CTGFP29279 349 aa15.31■□□□□ 0.04
CSMD1-205ENST00000519623 TNNI3KQ59H18 835 aa15.31■□□□□ 0.04
CSMD1-205ENST00000519623 ZNF333Q96JL9 665 aa15.31■□□□□ 0.04
CSMD1-205ENST00000519623 DBNDD2Q9BQY9 259 aa15.31■□□□□ 0.04
CSMD1-205ENST00000519623 RAI14Q9P0K7 980 aa15.31■□□□□ 0.04
CSMD1-205ENST00000519623 CPA4Q9UI42 421 aa15.31■□□□□ 0.04
CSMD1-205ENST00000519623 AFG3L2Q9Y4W6 797 aa15.31■□□□□ 0.04
CSMD1-205ENST00000519623 FPGT-TNNI3KV9GXZ4 949 aa15.31■□□□□ 0.04
CSMD1-205ENST00000519623 ZSWIM8A7E2V4 1837 aa15.31■□□□□ 0.04
CSMD1-205ENST00000519623 KIF22Q14807 665 aa15.3■□□□□ 0.04
CSMD1-205ENST00000519623 ITPRIPQ8IWB1 547 aa15.3■□□□□ 0.04
CSMD1-205ENST00000519623 FTSJ3Q8IY81 847 aaKnown RBP15.3■□□□□ 0.04
CSMD1-205ENST00000519623 PICK1Q9NRD5 415 aa15.3■□□□□ 0.04
CSMD1-205ENST00000519623 SNRKQ9NRH2 765 aa15.3■□□□□ 0.04
CSMD1-205ENST00000519623 LRP2BPQ9P2M1 347 aa15.3■□□□□ 0.04
CSMD1-205ENST00000519623 A0A0G2JLL6 359 aaPredicted RBP15.29■□□□□ 0.04
CSMD1-205ENST00000519623 GNRH1P01148 92 aa15.29■□□□□ 0.04
CSMD1-205ENST00000519623 EN2P19622 333 aaPredicted RBP15.29■□□□□ 0.04
CSMD1-205ENST00000519623 CCDC158Q5M9N0 1113 aa15.29■□□□□ 0.04
CSMD1-205ENST00000519623 PRPF38BQ5VTL8 546 aaKnown RBP15.29■□□□□ 0.04
CSMD1-205ENST00000519623 FASTKD5Q7L8L6 764 aaKnown RBP15.29■□□□□ 0.04
CSMD1-205ENST00000519623 PRRT2Q7Z6L0 340 aaPredicted RBP15.29■□□□□ 0.04
CSMD1-205ENST00000519623 ZNF512BQ96KM6 892 aaPredicted RBP15.29■□□□□ 0.04
CSMD1-205ENST00000519623 PHIPQ8WWQ0 1821 aa15.29■□□□□ 0.04
CSMD1-205ENST00000519623 RBBP6Q7Z6E9 1792 aaKnown RBP15.29■□□□□ 0.04
CSMD1-205ENST00000519623 ZBED9Q6R2W3 1325 aa15.28■□□□□ 0.04
CSMD1-205ENST00000519623 SLC34A2O95436 690 aa15.28■□□□□ 0.04
CSMD1-205ENST00000519623 CYP2E1P05181 493 aaPredicted RBP15.28■□□□□ 0.04
CSMD1-205ENST00000519623 OS9Q13438 667 aaPredicted RBP15.28■□□□□ 0.04
CSMD1-205ENST00000519623 SLC9C1Q4G0N8 1177 aa15.28■□□□□ 0.04
CSMD1-205ENST00000519623 TTC39AQ5SRH9 613 aa15.28■□□□□ 0.04
CSMD1-205ENST00000519623 NBPF11Q86T75 865 aa15.28■□□□□ 0.04
CSMD1-205ENST00000519623 TRIM47Q96LD4 638 aa15.28■□□□□ 0.04
CSMD1-205ENST00000519623 OSBPL5Q9H0X9 879 aaPredicted RBP15.28■□□□□ 0.04
CSMD1-205ENST00000519623 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.28■□□□□ 0.04
CSMD1-205ENST00000519623 FAM196BA6NMK8 535 aa15.27■□□□□ 0.04
CSMD1-205ENST00000519623 ECM2O94769 699 aaPredicted RBP15.27■□□□□ 0.04
CSMD1-205ENST00000519623 CYP2C8P10632 490 aa15.27■□□□□ 0.04
CSMD1-205ENST00000519623 BCRP11274 1271 aa15.27■□□□□ 0.04
CSMD1-205ENST00000519623 PSMC4P43686 418 aa15.27■□□□□ 0.04
CSMD1-205ENST00000519623 PRMT2P55345 433 aa15.27■□□□□ 0.04
CSMD1-205ENST00000519623 PPP4CP60510 307 aa15.27■□□□□ 0.04
CSMD1-205ENST00000519623 RRP1BQ14684 758 aaKnown RBP15.27■□□□□ 0.04
CSMD1-205ENST00000519623 TEX11Q8IYF3 940 aa15.27■□□□□ 0.04
CSMD1-205ENST00000519623 SH3RF3Q8TEJ3 882 aaPredicted RBP15.27■□□□□ 0.04
CSMD1-205ENST00000519623 EAF2Q96CJ1 260 aaPredicted RBP15.27■□□□□ 0.04
CSMD1-205ENST00000519623 PARK7Q99497 189 aaKnown RBP15.27■□□□□ 0.04
CSMD1-205ENST00000519623 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.27■□□□□ 0.04
CSMD1-205ENST00000519623 DBNLQ9UJU6 430 aaKnown RBP15.27■□□□□ 0.04
CSMD1-205ENST00000519623 PTPRFP10586 1907 aa15.27■□□□□ 0.03
CSMD1-205ENST00000519623 MYO5AQ9Y4I1 1855 aaKnown RBP15.27■□□□□ 0.03
CSMD1-205ENST00000519623 COL2A1P02458 1487 aaPredicted RBP15.27■□□□□ 0.03
CSMD1-205ENST00000519623 ZAP70P43403 619 aa15.26■□□□□ 0.03
CSMD1-205ENST00000519623 NAA16Q6N069 864 aaPredicted RBP15.26■□□□□ 0.03
CSMD1-205ENST00000519623 CEP85Q6P2H3 762 aa15.26■□□□□ 0.03
CSMD1-205ENST00000519623 ADGRA1Q86SQ6 560 aa15.26■□□□□ 0.03
CSMD1-205ENST00000519623 CCDC84Q86UT8 332 aaPredicted RBP15.26■□□□□ 0.03
CSMD1-205ENST00000519623 PANK1Q8TE04 598 aa15.26■□□□□ 0.03
CSMD1-205ENST00000519623 SH3TC2Q8TF17 1288 aa15.26■□□□□ 0.03
CSMD1-205ENST00000519623 TMEM106CQ9BVX2 250 aa15.26■□□□□ 0.03
CSMD1-205ENST00000519623 CCDC8Q9H0W5 538 aaPredicted RBP15.26■□□□□ 0.03
CSMD1-205ENST00000519623 TLR7Q9NYK1 1049 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms