RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 SH3TC2Q8TF17 1288 aa16.56■□□□□ 0.24
POLR2J3-217ENST00000513438 FRAT1Q92837 279 aaPredicted RBP16.56■□□□□ 0.24
POLR2J3-217ENST00000513438 ZSWIM8A7E2V4 1837 aa16.55■□□□□ 0.24
POLR2J3-217ENST00000513438 DDTLA6NHG4 134 aaPredicted RBP16.55■□□□□ 0.24
POLR2J3-217ENST00000513438 GNAI2P04899 355 aa16.55■□□□□ 0.24
POLR2J3-217ENST00000513438 SLURP2P0DP57 97 aa16.55■□□□□ 0.24
POLR2J3-217ENST00000513438 TRIM27P14373 513 aa16.55■□□□□ 0.24
POLR2J3-217ENST00000513438 CTGFP29279 349 aa16.55■□□□□ 0.24
POLR2J3-217ENST00000513438 BTDP43251 543 aa16.55■□□□□ 0.24
POLR2J3-217ENST00000513438 PSMC4P43686 418 aa16.55■□□□□ 0.24
POLR2J3-217ENST00000513438 MAP3K10Q02779 954 aa16.55■□□□□ 0.24
POLR2J3-217ENST00000513438 MECOMQ03112 1051 aa16.55■□□□□ 0.24
POLR2J3-217ENST00000513438 GPAT2Q6NUI2 795 aa16.55■□□□□ 0.24
POLR2J3-217ENST00000513438 ERICH6Q7L0X2 663 aa16.55■□□□□ 0.24
POLR2J3-217ENST00000513438 CLUAP1Q96AJ1 413 aa16.55■□□□□ 0.24
POLR2J3-217ENST00000513438 DDX4Q9NQI0 724 aaKnown RBP16.55■□□□□ 0.24
POLR2J3-217ENST00000513438 ZHX2Q9Y6X8 837 aa16.55■□□□□ 0.24
POLR2J3-217ENST00000513438 ATRNL1Q5VV63 1379 aa16.54■□□□□ 0.24
POLR2J3-217ENST00000513438 PRMT2P55345 433 aa16.54■□□□□ 0.24
POLR2J3-217ENST00000513438 PICALMQ13492 652 aa16.54■□□□□ 0.24
POLR2J3-217ENST00000513438 GORABQ5T7V8 394 aa16.54■□□□□ 0.24
POLR2J3-217ENST00000513438 ATF7IPQ6VMQ6 1270 aa16.54■□□□□ 0.24
POLR2J3-217ENST00000513438 SCYL3Q8IZE3 742 aa16.54■□□□□ 0.24
POLR2J3-217ENST00000513438 PICK1Q9NRD5 415 aa16.54■□□□□ 0.24
POLR2J3-217ENST00000513438 HMG20BQ9P0W2 317 aa16.54■□□□□ 0.24
POLR2J3-217ENST00000513438 MROH7-TTC4A0A0A0MT08 1334 aa16.53■□□□□ 0.24
POLR2J3-217ENST00000513438 ADGRA2Q96PE1 1338 aa16.53■□□□□ 0.24
POLR2J3-217ENST00000513438 GPR75-ASB3A0A0A6YYF3 556 aa16.53■□□□□ 0.24
POLR2J3-217ENST00000513438 PNMA6EA0A0J9YXQ4 647 aa16.53■□□□□ 0.24
POLR2J3-217ENST00000513438 FMNL1O95466 1100 aaPredicted RBP16.53■□□□□ 0.24
POLR2J3-217ENST00000513438 PTPRAP18433 802 aa16.53■□□□□ 0.24
POLR2J3-217ENST00000513438 HOXD10P28358 340 aa16.53■□□□□ 0.24
POLR2J3-217ENST00000513438 G3BP1Q13283 466 aaKnown RBP eCLIP16.53■□□□□ 0.24
POLR2J3-217ENST00000513438 TBC1D9Q6ZT07 1266 aa16.53■□□□□ 0.24
POLR2J3-217ENST00000513438 ZNF384Q8TF68 577 aa16.53■□□□□ 0.24
POLR2J3-217ENST00000513438 TRIM47Q96LD4 638 aa16.53■□□□□ 0.24
POLR2J3-217ENST00000513438 SRRDQ9UH36 339 aa16.53■□□□□ 0.24
POLR2J3-217ENST00000513438 LDHCP07864 332 aa16.52■□□□□ 0.24
POLR2J3-217ENST00000513438 CYP2C8P10632 490 aa16.52■□□□□ 0.24
POLR2J3-217ENST00000513438 OSBPP22059 807 aa16.52■□□□□ 0.24
POLR2J3-217ENST00000513438 RHBDL3P58872 404 aa16.52■□□□□ 0.24
POLR2J3-217ENST00000513438 PI16Q6UXB8 463 aa16.52■□□□□ 0.24
POLR2J3-217ENST00000513438 FASTKD5Q7L8L6 764 aaKnown RBP16.52■□□□□ 0.24
POLR2J3-217ENST00000513438 SPATA5Q8NB90 893 aa16.52■□□□□ 0.24
POLR2J3-217ENST00000513438 AFG3L2Q9Y4W6 797 aa16.52■□□□□ 0.24
POLR2J3-217ENST00000513438 RFX7Q2KHR2 1363 aa16.51■□□□□ 0.23
POLR2J3-217ENST00000513438 A0A0G2JLL6 359 aaPredicted RBP16.51■□□□□ 0.23
POLR2J3-217ENST00000513438 CTNND1O60716 968 aaKnown RBP16.51■□□□□ 0.23
POLR2J3-217ENST00000513438 GADL1Q6ZQY3 521 aa16.51■□□□□ 0.23
POLR2J3-217ENST00000513438 PRRT2Q7Z6L0 340 aaPredicted RBP16.51■□□□□ 0.23
POLR2J3-217ENST00000513438 NSUN4Q96CB9 384 aaKnown RBP16.51■□□□□ 0.23
POLR2J3-217ENST00000513438 PARK7Q99497 189 aaKnown RBP16.51■□□□□ 0.23
POLR2J3-217ENST00000513438 RAI14Q9P0K7 980 aa16.51■□□□□ 0.23
POLR2J3-217ENST00000513438 BRCA2P51587 3418 aa16.51■□□□□ 0.23
POLR2J3-217ENST00000513438 DOCK2Q92608 1830 aa16.5■□□□□ 0.23
POLR2J3-217ENST00000513438 BCRP11274 1271 aa16.5■□□□□ 0.23
POLR2J3-217ENST00000513438 ARID4AP29374 1257 aaPredicted RBP16.5■□□□□ 0.23
POLR2J3-217ENST00000513438 GSTO1P78417 241 aa16.5■□□□□ 0.23
POLR2J3-217ENST00000513438 MTFR1Q15390 333 aa16.5■□□□□ 0.23
POLR2J3-217ENST00000513438 TMEM57Q8N5G2 664 aa16.5■□□□□ 0.23
POLR2J3-217ENST00000513438 RAET1EQ8TD07 263 aa16.5■□□□□ 0.23
POLR2J3-217ENST00000513438 TBC1D12O60347 775 aa16.49■□□□□ 0.23
POLR2J3-217ENST00000513438 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
POLR2J3-217ENST00000513438 GRK4P32298 578 aa16.49■□□□□ 0.23
POLR2J3-217ENST00000513438 MCAMP43121 646 aa16.49■□□□□ 0.23
POLR2J3-217ENST00000513438 CCDC84Q86UT8 332 aaPredicted RBP16.49■□□□□ 0.23
POLR2J3-217ENST00000513438 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.49■□□□□ 0.23
POLR2J3-217ENST00000513438 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.49■□□□□ 0.23
POLR2J3-217ENST00000513438 COLQQ9Y215 455 aaPredicted RBP16.49■□□□□ 0.23
POLR2J3-217ENST00000513438 MYPNQ86TC9 1320 aa16.48■□□□□ 0.23
POLR2J3-217ENST00000513438 TRIM75PA6NK02 468 aa16.48■□□□□ 0.23
POLR2J3-217ENST00000513438 FAM196BA6NMK8 535 aa16.48■□□□□ 0.23
POLR2J3-217ENST00000513438 MAP4K4O95819 1239 aaPredicted RBP16.48■□□□□ 0.23
POLR2J3-217ENST00000513438 UQCRFS1P1P0C7P4 283 aa16.48■□□□□ 0.23
POLR2J3-217ENST00000513438 FXR1P51114 621 aaKnown RBP eCLIP16.48■□□□□ 0.23
POLR2J3-217ENST00000513438 FCGRTP55899 365 aa16.48■□□□□ 0.23
POLR2J3-217ENST00000513438 ZKSCAN2Q63HK3 967 aa16.48■□□□□ 0.23
POLR2J3-217ENST00000513438 LRP2BPQ9P2M1 347 aa16.48■□□□□ 0.23
POLR2J3-217ENST00000513438 ATP8B2P98198 1209 aa16.47■□□□□ 0.23
POLR2J3-217ENST00000513438 SNRKQ9NRH2 765 aa16.47■□□□□ 0.23
POLR2J3-217ENST00000513438 BIN2Q9UBW5 565 aaPredicted RBP16.47■□□□□ 0.23
POLR2J3-217ENST00000513438 GABRQQ9UN88 632 aa16.47■□□□□ 0.23
POLR2J3-217ENST00000513438 SLC45A1Q9Y2W3 748 aa16.47■□□□□ 0.23
POLR2J3-217ENST00000513438 H0YGN5 161 aa16.46■□□□□ 0.23
POLR2J3-217ENST00000513438 PRKCZQ05513 592 aa16.46■□□□□ 0.23
POLR2J3-217ENST00000513438 POLA2Q14181 598 aa16.46■□□□□ 0.23
POLR2J3-217ENST00000513438 TEX11Q8IYF3 940 aa16.46■□□□□ 0.23
POLR2J3-217ENST00000513438 DPF3Q92784 378 aa16.46■□□□□ 0.23
POLR2J3-217ENST00000513438 OSBPL5Q9H0X9 879 aaPredicted RBP16.46■□□□□ 0.23
POLR2J3-217ENST00000513438 GPR108Q9NPR9 543 aa16.46■□□□□ 0.23
POLR2J3-217ENST00000513438 SURF6O75683 361 aaKnown RBP16.45■□□□□ 0.22
POLR2J3-217ENST00000513438 CCL5P13501 91 aa16.45■□□□□ 0.22
POLR2J3-217ENST00000513438 SPP2Q13103 211 aa16.45■□□□□ 0.22
POLR2J3-217ENST00000513438 OS9Q13438 667 aaPredicted RBP16.45■□□□□ 0.22
POLR2J3-217ENST00000513438 TNNI3KQ59H18 835 aa16.45■□□□□ 0.22
POLR2J3-217ENST00000513438 CCDC158Q5M9N0 1113 aa16.45■□□□□ 0.22
POLR2J3-217ENST00000513438 TTC39AQ5SRH9 613 aa16.45■□□□□ 0.22
POLR2J3-217ENST00000513438 SSH3Q8TE77 659 aa16.45■□□□□ 0.22
POLR2J3-217ENST00000513438 SH3RF3Q8TEJ3 882 aaPredicted RBP16.45■□□□□ 0.22
POLR2J3-217ENST00000513438 DBNDD2Q9BQY9 259 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms