RNA–Protein interactions for RNA: ENST00000512234.1

SQSTM1-214, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 1,722 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-214ENST00000512234 FAM151AQ8WW52 585 aa18.56■□□□□ 0.56
SQSTM1-214ENST00000512234 OSBP2Q969R2 916 aa18.56■□□□□ 0.56
SQSTM1-214ENST00000512234 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.56■□□□□ 0.56
SQSTM1-214ENST00000512234 ANGEL1Q9UNK9 670 aaKnown RBP18.56■□□□□ 0.56
SQSTM1-214ENST00000512234 GSPT1P15170 499 aaKnown RBP18.55■□□□□ 0.56
SQSTM1-214ENST00000512234 FAM83AQ86UY5 434 aa18.55■□□□□ 0.56
SQSTM1-214ENST00000512234 SDR42E1Q8WUS8 393 aa18.55■□□□□ 0.56
SQSTM1-214ENST00000512234 TLL2Q9Y6L7 1015 aa18.55■□□□□ 0.56
SQSTM1-214ENST00000512234 M0R2C6 588 aa18.54■□□□□ 0.56
SQSTM1-214ENST00000512234 RNF113AO15541 343 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-214ENST00000512234 USP2O75604 605 aaPredicted RBP18.54■□□□□ 0.56
SQSTM1-214ENST00000512234 FKBP1CQ5VVH2 108 aa18.54■□□□□ 0.56
SQSTM1-214ENST00000512234 DNAJC5GQ8N7S2 189 aa18.54■□□□□ 0.56
SQSTM1-214ENST00000512234 CLMNQ96JQ2 1002 aa18.54■□□□□ 0.56
SQSTM1-214ENST00000512234 OSBPL3Q9H4L5 887 aa18.54■□□□□ 0.56
SQSTM1-214ENST00000512234 PALD1Q9ULE6 856 aa18.54■□□□□ 0.56
SQSTM1-214ENST00000512234 SMIM22K7EJ46 135 aa18.54■□□□□ 0.56
SQSTM1-214ENST00000512234 CCDC129Q6ZRS4 1044 aa18.54■□□□□ 0.56
SQSTM1-214ENST00000512234 PPP2R3BQ9Y5P8 575 aa18.54■□□□□ 0.56
SQSTM1-214ENST00000512234 FLT1P17948 1338 aa18.53■□□□□ 0.56
SQSTM1-214ENST00000512234 NF2P35240 595 aa18.53■□□□□ 0.56
SQSTM1-214ENST00000512234 MKRN3Q13064 507 aaKnown RBP18.53■□□□□ 0.56
SQSTM1-214ENST00000512234 UBE3CQ15386 1083 aa18.53■□□□□ 0.56
SQSTM1-214ENST00000512234 CSRNP1Q96S65 589 aa18.53■□□□□ 0.56
SQSTM1-214ENST00000512234 ZIC5Q96T25 663 aa18.53■□□□□ 0.56
SQSTM1-214ENST00000512234 OSBPL5Q9H0X9 879 aaPredicted RBP18.53■□□□□ 0.56
SQSTM1-214ENST00000512234 PPP4R2Q9NY27 417 aa18.53■□□□□ 0.56
SQSTM1-214ENST00000512234 USP5P45974 858 aa18.52■□□□□ 0.56
SQSTM1-214ENST00000512234 VEGFBP49765 207 aa18.52■□□□□ 0.56
SQSTM1-214ENST00000512234 DEFB115Q30KQ5 88 aa18.52■□□□□ 0.56
SQSTM1-214ENST00000512234 SUPT20HL1Q3ZLR7 823 aa18.52■□□□□ 0.56
SQSTM1-214ENST00000512234 EVI5LQ96CN4 794 aa18.52■□□□□ 0.56
SQSTM1-214ENST00000512234 FAM227BQ96M60 508 aa18.52■□□□□ 0.56
SQSTM1-214ENST00000512234 AK9Q5TCS8 1911 aa18.52■□□□□ 0.56
SQSTM1-214ENST00000512234 AOC2O75106 756 aa18.52■□□□□ 0.55
SQSTM1-214ENST00000512234 ENTPD3O75355 529 aa18.52■□□□□ 0.55
SQSTM1-214ENST00000512234 TTC22Q5TAA0 569 aa18.52■□□□□ 0.55
SQSTM1-214ENST00000512234 CYP2D6P10635 497 aa18.51■□□□□ 0.55
SQSTM1-214ENST00000512234 ZSCAN25Q6NSZ9 544 aa18.51■□□□□ 0.55
SQSTM1-214ENST00000512234 ZKSCAN4Q969J2 545 aaPredicted RBP18.51■□□□□ 0.55
SQSTM1-214ENST00000512234 CDK5RAP2Q96SN8 1893 aa18.5■□□□□ 0.55
SQSTM1-214ENST00000512234 CYP2D7A0A087X1C5 515 aa18.5■□□□□ 0.55
SQSTM1-214ENST00000512234 RASSF10A6NK89 507 aa18.5■□□□□ 0.55
SQSTM1-214ENST00000512234 PLCG2P16885 1265 aa18.5■□□□□ 0.55
SQSTM1-214ENST00000512234 CNKSR2Q8WXI2 1034 aa18.5■□□□□ 0.55
SQSTM1-214ENST00000512234 APPBP2Q92624 585 aa18.5■□□□□ 0.55
SQSTM1-214ENST00000512234 AIDAQ96BJ3 306 aa18.5■□□□□ 0.55
SQSTM1-214ENST00000512234 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.5■□□□□ 0.55
SQSTM1-214ENST00000512234 MYH7P12883 1935 aa18.5■□□□□ 0.55
SQSTM1-214ENST00000512234 A0A0D9SFI3 127 aa18.49■□□□□ 0.55
SQSTM1-214ENST00000512234 PPP1R12BO60237 982 aaPredicted RBP18.49■□□□□ 0.55
SQSTM1-214ENST00000512234 SDSP20132 328 aa18.49■□□□□ 0.55
SQSTM1-214ENST00000512234 INPP5BP32019 993 aa18.49■□□□□ 0.55
SQSTM1-214ENST00000512234 ZNF157P51786 506 aaPredicted RBP18.49■□□□□ 0.55
SQSTM1-214ENST00000512234 NMIQ13287 307 aaPredicted RBP18.49■□□□□ 0.55
SQSTM1-214ENST00000512234 STRBPQ96SI9 672 aaKnown RBP18.49■□□□□ 0.55
SQSTM1-214ENST00000512234 SLC4A4Q9Y6R1 1079 aa18.49■□□□□ 0.55
SQSTM1-214ENST00000512234 GPAA1O43292 621 aa18.49■□□□□ 0.55
SQSTM1-214ENST00000512234 RRP1BQ14684 758 aaKnown RBP18.49■□□□□ 0.55
SQSTM1-214ENST00000512234 SHROOM1Q2M3G4 852 aaPredicted RBP18.49■□□□□ 0.55
SQSTM1-214ENST00000512234 ZMYM1Q5SVZ6 1142 aa18.49■□□□□ 0.55
SQSTM1-214ENST00000512234 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.49■□□□□ 0.55
SQSTM1-214ENST00000512234 ARMC9Q7Z3E5 817 aa18.49■□□□□ 0.55
SQSTM1-214ENST00000512234 CAPNS2Q96L46 248 aa18.49■□□□□ 0.55
SQSTM1-214ENST00000512234 CRNKL1Q9BZJ0 848 aaKnown RBP18.49■□□□□ 0.55
SQSTM1-214ENST00000512234 ATRNL1Q5VV63 1379 aa18.48■□□□□ 0.55
SQSTM1-214ENST00000512234 PLCD1P51178 756 aa18.48■□□□□ 0.55
SQSTM1-214ENST00000512234 LDLRAD1Q5T700 205 aa18.48■□□□□ 0.55
SQSTM1-214ENST00000512234 RGMBQ6NW40 437 aa18.48■□□□□ 0.55
SQSTM1-214ENST00000512234 KLRG1Q96E93 195 aa18.48■□□□□ 0.55
SQSTM1-214ENST00000512234 WRNIP1Q96S55 665 aa18.48■□□□□ 0.55
SQSTM1-214ENST00000512234 ELP3Q9H9T3 547 aa18.48■□□□□ 0.55
SQSTM1-214ENST00000512234 DCP1AQ9NPI6 582 aaPredicted RBP18.48■□□□□ 0.55
SQSTM1-214ENST00000512234 VPS53Q5VIR6 699 aa18.47■□□□□ 0.55
SQSTM1-214ENST00000512234 CCDC84Q86UT8 332 aaPredicted RBP18.47■□□□□ 0.55
SQSTM1-214ENST00000512234 STK11IPQ8N1F8 1099 aa18.47■□□□□ 0.55
SQSTM1-214ENST00000512234 PAPPA2Q9BXP8 1791 aa18.47■□□□□ 0.55
SQSTM1-214ENST00000512234 MCM9Q9NXL9 1143 aa18.47■□□□□ 0.55
SQSTM1-214ENST00000512234 RPAP1Q9BWH6 1393 aaPredicted RBP18.46■□□□□ 0.55
SQSTM1-214ENST00000512234 WDR33Q9C0J8 1336 aaKnown RBP18.46■□□□□ 0.55
SQSTM1-214ENST00000512234 ZNF589Q86UQ0 364 aaPredicted RBP18.46■□□□□ 0.55
SQSTM1-214ENST00000512234 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.46■□□□□ 0.55
SQSTM1-214ENST00000512234 IL25Q9H293 177 aa18.46■□□□□ 0.55
SQSTM1-214ENST00000512234 DNAJC18Q9H819 358 aa18.46■□□□□ 0.55
SQSTM1-214ENST00000512234 FAM155AB1AL88 458 aaPredicted RBP18.46■□□□□ 0.55
SQSTM1-214ENST00000512234 IGSF3O75054 1194 aa18.46■□□□□ 0.55
SQSTM1-214ENST00000512234 ZFYP08048 801 aaPredicted RBP18.46■□□□□ 0.55
SQSTM1-214ENST00000512234 IREB2P48200 963 aaKnown RBP18.46■□□□□ 0.55
SQSTM1-214ENST00000512234 FKBP1BP68106 108 aa18.46■□□□□ 0.55
SQSTM1-214ENST00000512234 VGLL4Q14135 290 aa18.46■□□□□ 0.55
SQSTM1-214ENST00000512234 CWC27Q6UX04 472 aaKnown RBP18.46■□□□□ 0.55
SQSTM1-214ENST00000512234 DYNLL2Q96FJ2 89 aa18.46■□□□□ 0.55
SQSTM1-214ENST00000512234 GSG1L2A8MUP6 293 aa18.45■□□□□ 0.54
SQSTM1-214ENST00000512234 PHF20L1A8MW92 1017 aa18.45■□□□□ 0.54
SQSTM1-214ENST00000512234 FOXP2O15409 715 aa18.45■□□□□ 0.54
SQSTM1-214ENST00000512234 NPM3O75607 178 aaKnown RBP18.45■□□□□ 0.54
SQSTM1-214ENST00000512234 GJA5P36382 358 aa18.45■□□□□ 0.54
SQSTM1-214ENST00000512234 JAG1P78504 1218 aa18.45■□□□□ 0.54
SQSTM1-214ENST00000512234 MAP3K11Q16584 847 aa18.45■□□□□ 0.54
SQSTM1-214ENST00000512234 RASAL3Q86YV0 1011 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms