RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 ARHGAP23Q9P227 1491 aa11.18□□□□□ -0.62
LINC01088-207ENST00000511241 IQGAP1P46940 1657 aa11.17□□□□□ -0.62
LINC01088-207ENST00000511241 PIK3C2BO00750 1634 aa11.17□□□□□ -0.62
LINC01088-207ENST00000511241 SYNMO15061 1565 aa11.17□□□□□ -0.62
LINC01088-207ENST00000511241 CDC27P30260 824 aa11.17□□□□□ -0.62
LINC01088-207ENST00000511241 GDF6Q6KF10 455 aaPredicted RBP11.17□□□□□ -0.62
LINC01088-207ENST00000511241 MUC3BQ9H195 1237 aa11.17□□□□□ -0.62
LINC01088-207ENST00000511241 PPM1HQ9ULR3 514 aa11.17□□□□□ -0.62
LINC01088-207ENST00000511241 LMTK2Q8IWU2 1503 aa11.17□□□□□ -0.62
LINC01088-207ENST00000511241 LRRC7Q96NW7 1537 aa11.17□□□□□ -0.62
LINC01088-207ENST00000511241 METTL12A8MUP2 240 aa11.16□□□□□ -0.62
LINC01088-207ENST00000511241 ARHGEF15O94989 841 aa11.16□□□□□ -0.62
LINC01088-207ENST00000511241 CTSHP09668 335 aa11.16□□□□□ -0.62
LINC01088-207ENST00000511241 SPRED3Q2MJR0 410 aa11.16□□□□□ -0.62
LINC01088-207ENST00000511241 RPS26P11Q5JNZ5 115 aaPredicted RBP11.16□□□□□ -0.62
LINC01088-207ENST00000511241 C3orf58Q8NDZ4 430 aa11.16□□□□□ -0.62
LINC01088-207ENST00000511241 BACH2Q9BYV9 841 aa11.16□□□□□ -0.62
LINC01088-207ENST00000511241 SOX13Q9UN79 622 aa11.16□□□□□ -0.62
LINC01088-207ENST00000511241 ANKRD50Q9ULJ7 1429 aa11.16□□□□□ -0.62
LINC01088-207ENST00000511241 TMEM2Q9UHN6 1383 aa11.16□□□□□ -0.62
LINC01088-207ENST00000511241 SLIT1O75093 1534 aa11.15□□□□□ -0.62
LINC01088-207ENST00000511241 CABP4P57796 275 aa11.15□□□□□ -0.62
LINC01088-207ENST00000511241 TSNAXIP1Q2TAA8 658 aa11.15□□□□□ -0.62
LINC01088-207ENST00000511241 LACRTQ9GZZ8 138 aa11.15□□□□□ -0.62
LINC01088-207ENST00000511241 NOS1P29475 1434 aa11.15□□□□□ -0.62
LINC01088-207ENST00000511241 USP31Q70CQ4 1352 aa11.15□□□□□ -0.63
LINC01088-207ENST00000511241 EFCAB6Q5THR3 1501 aa11.14□□□□□ -0.63
LINC01088-207ENST00000511241 TOM1O60784 492 aa11.14□□□□□ -0.63
LINC01088-207ENST00000511241 RECKO95980 971 aa11.14□□□□□ -0.63
LINC01088-207ENST00000511241 DGKGP49619 791 aa11.14□□□□□ -0.63
LINC01088-207ENST00000511241 TAF1CQ15572 869 aaPredicted RBP11.14□□□□□ -0.63
LINC01088-207ENST00000511241 IL22RA1Q8N6P7 574 aa11.14□□□□□ -0.63
LINC01088-207ENST00000511241 TMEM87AQ8NBN3 555 aa11.14□□□□□ -0.63
LINC01088-207ENST00000511241 SLC26A8Q96RN1 970 aa11.14□□□□□ -0.63
LINC01088-207ENST00000511241 CLEC4MQ9H2X3 399 aaPredicted RBP11.14□□□□□ -0.63
LINC01088-207ENST00000511241 ST13P50502 369 aaKnown RBP11.13□□□□□ -0.63
LINC01088-207ENST00000511241 INSM1Q01101 510 aaPredicted RBP11.13□□□□□ -0.63
LINC01088-207ENST00000511241 MSL1Q68DK7 614 aa11.13□□□□□ -0.63
LINC01088-207ENST00000511241 C8orf86Q6ZUL3 223 aa11.13□□□□□ -0.63
LINC01088-207ENST00000511241 WFDC8Q8IUA0 241 aa11.13□□□□□ -0.63
LINC01088-207ENST00000511241 ZSCAN1Q8NBB4 408 aa11.13□□□□□ -0.63
LINC01088-207ENST00000511241 ZNF576Q9H609 170 aa11.13□□□□□ -0.63
LINC01088-207ENST00000511241 RRAGCQ9HB90 399 aa11.13□□□□□ -0.63
LINC01088-207ENST00000511241 AKAP2Q9Y2D5 859 aa11.13□□□□□ -0.63
LINC01088-207ENST00000511241 PPME1Q9Y570 386 aa11.13□□□□□ -0.63
LINC01088-207ENST00000511241 EID1Q9Y6B2 187 aa11.13□□□□□ -0.63
LINC01088-207ENST00000511241 PIK3R2O00459 728 aa11.12□□□□□ -0.63
LINC01088-207ENST00000511241 HOXB4P17483 251 aaPredicted RBP11.12□□□□□ -0.63
LINC01088-207ENST00000511241 LDLRAD1Q5T700 205 aa11.12□□□□□ -0.63
LINC01088-207ENST00000511241 ADAMTSL4Q6UY14 1074 aa11.12□□□□□ -0.63
LINC01088-207ENST00000511241 VN1R5Q7Z5H4 357 aa11.12□□□□□ -0.63
LINC01088-207ENST00000511241 SCAMP3O14828 347 aaKnown RBP11.11□□□□□ -0.63
LINC01088-207ENST00000511241 NID1P14543 1247 aa11.11□□□□□ -0.63
LINC01088-207ENST00000511241 BAG6P46379 1132 aa11.11□□□□□ -0.63
LINC01088-207ENST00000511241 CEP44Q9C0F1 390 aa11.11□□□□□ -0.63
LINC01088-207ENST00000511241 SH2B1Q9NRF2 756 aaPredicted RBP11.11□□□□□ -0.63
LINC01088-207ENST00000511241 METTL5Q9NRN9 209 aaKnown RBP11.11□□□□□ -0.63
LINC01088-207ENST00000511241 ADGRB3O60242 1522 aa11.1□□□□□ -0.63
LINC01088-207ENST00000511241 H3BRJ5 948 aa11.1□□□□□ -0.63
LINC01088-207ENST00000511241 EIF4EBP3O60516 100 aaPredicted RBP11.1□□□□□ -0.63
LINC01088-207ENST00000511241 LORP23490 312 aaPredicted RBP11.1□□□□□ -0.63
LINC01088-207ENST00000511241 PCDH1Q08174 1060 aa11.1□□□□□ -0.63
LINC01088-207ENST00000511241 COL9A3Q14050 684 aaPredicted RBP11.1□□□□□ -0.63
LINC01088-207ENST00000511241 FAM117BQ6P1L5 589 aa11.1□□□□□ -0.63
LINC01088-207ENST00000511241 WNT8BQ93098 351 aa11.1□□□□□ -0.63
LINC01088-207ENST00000511241 TTF2Q9UNY4 1162 aaKnown RBP11.1□□□□□ -0.63
LINC01088-207ENST00000511241 EPHA1P21709 976 aa11.09□□□□□ -0.63
LINC01088-207ENST00000511241 IKBKEQ14164 716 aa11.09□□□□□ -0.63
LINC01088-207ENST00000511241 SRA1Q9HD15 236 aaKnown RBP11.09□□□□□ -0.63
LINC01088-207ENST00000511241 TET3O43151 1660 aa11.08□□□□□ -0.64
LINC01088-207ENST00000511241 TMEM94Q12767 1356 aa11.08□□□□□ -0.64
LINC01088-207ENST00000511241 ESRRAP11474 423 aaPredicted RBP11.08□□□□□ -0.64
LINC01088-207ENST00000511241 MEI1Q5TIA1 1274 aa11.08□□□□□ -0.64
LINC01088-207ENST00000511241 SV2BQ7L1I2 683 aa11.08□□□□□ -0.64
LINC01088-207ENST00000511241 MAP4K3Q8IVH8 894 aa11.08□□□□□ -0.64
LINC01088-207ENST00000511241 SLC52A1Q9NWF4 448 aa11.08□□□□□ -0.64
LINC01088-207ENST00000511241 MKL2Q9ULH7 1088 aa11.08□□□□□ -0.64
LINC01088-207ENST00000511241 UNC13BO14795 1591 aa11.07□□□□□ -0.64
LINC01088-207ENST00000511241 ROCK1Q13464 1354 aa11.07□□□□□ -0.64
LINC01088-207ENST00000511241 B3GALT4O96024 378 aa11.07□□□□□ -0.64
LINC01088-207ENST00000511241 LINC00114Q6XXX2 140 aa11.07□□□□□ -0.64
LINC01088-207ENST00000511241 DTWD1Q8N5C7 304 aa11.07□□□□□ -0.64
LINC01088-207ENST00000511241 DDX54Q8TDD1 881 aaKnown RBP11.07□□□□□ -0.64
LINC01088-207ENST00000511241 NOC4LQ9BVI4 516 aaKnown RBP11.07□□□□□ -0.64
LINC01088-207ENST00000511241 SOX17Q9H6I2 414 aaPredicted RBP11.07□□□□□ -0.64
LINC01088-207ENST00000511241 SEC31BQ9NQW1 1179 aa11.07□□□□□ -0.64
LINC01088-207ENST00000511241 ZFYVE9O95405 1425 aa11.07□□□□□ -0.64
LINC01088-207ENST00000511241 RIMS2Q9UQ26 1411 aa11.07□□□□□ -0.64
LINC01088-207ENST00000511241 MED1Q15648 1581 aaPredicted RBP11.07□□□□□ -0.64
LINC01088-207ENST00000511241 NUP155O75694 1391 aa11.06□□□□□ -0.64
LINC01088-207ENST00000511241 LINC01387J3KSC0 135 aa11.06□□□□□ -0.64
LINC01088-207ENST00000511241 KCNA6P17658 529 aa11.06□□□□□ -0.64
LINC01088-207ENST00000511241 ARL4DP49703 201 aa11.06□□□□□ -0.64
LINC01088-207ENST00000511241 PPP2R3AQ06190 1150 aa11.06□□□□□ -0.64
LINC01088-207ENST00000511241 ZNF423Q2M1K9 1284 aa11.06□□□□□ -0.64
LINC01088-207ENST00000511241 TRAPPC3LQ5T215 181 aa11.06□□□□□ -0.64
LINC01088-207ENST00000511241 DMRTC2Q8IXT2 367 aaPredicted RBP11.06□□□□□ -0.64
LINC01088-207ENST00000511241 DCAF11Q8TEB1 546 aa11.06□□□□□ -0.64
LINC01088-207ENST00000511241 OSGEPQ9NPF4 335 aa11.06□□□□□ -0.64
LINC01088-207ENST00000511241 TMEM39AQ9NV64 488 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms