RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 FBXO3Q9UK99 471 aa16.69■□□□□ 0.26
DDX41-210ENST00000509576 GABRQQ9UN88 632 aa16.69■□□□□ 0.26
DDX41-210ENST00000509576 COLQQ9Y215 455 aaPredicted RBP16.69■□□□□ 0.26
DDX41-210ENST00000509576 LAMA3Q16787 3333 aa16.68■□□□□ 0.26
DDX41-210ENST00000509576 PSMC4P43686 418 aa16.68■□□□□ 0.26
DDX41-210ENST00000509576 PI16Q6UXB8 463 aa16.68■□□□□ 0.26
DDX41-210ENST00000509576 TMEM106CQ9BVX2 250 aa16.68■□□□□ 0.26
DDX41-210ENST00000509576 IDI2Q9BXS1 227 aa16.68■□□□□ 0.26
DDX41-210ENST00000509576 IL15P40933 162 aaPredicted RBP16.67■□□□□ 0.26
DDX41-210ENST00000509576 RHBDL3P58872 404 aa16.67■□□□□ 0.26
DDX41-210ENST00000509576 RRP1BQ14684 758 aaKnown RBP16.67■□□□□ 0.26
DDX41-210ENST00000509576 SLC4A8Q2Y0W8 1093 aa16.67■□□□□ 0.26
DDX41-210ENST00000509576 HOOK2Q96ED9 719 aa16.67■□□□□ 0.26
DDX41-210ENST00000509576 DENND2AQ9ULE3 1009 aa16.67■□□□□ 0.26
DDX41-210ENST00000509576 AFG3L2Q9Y4W6 797 aa16.67■□□□□ 0.26
DDX41-210ENST00000509576 A0A0G2JLL6 359 aaPredicted RBP16.66■□□□□ 0.26
DDX41-210ENST00000509576 FAM196BA6NMK8 535 aa16.66■□□□□ 0.26
DDX41-210ENST00000509576 H0YGN5 161 aa16.66■□□□□ 0.26
DDX41-210ENST00000509576 PTPRAP18433 802 aa16.66■□□□□ 0.26
DDX41-210ENST00000509576 ZEB1P37275 1124 aaPredicted RBP16.66■□□□□ 0.26
DDX41-210ENST00000509576 RARSP54136 660 aaKnown RBP16.66■□□□□ 0.26
DDX41-210ENST00000509576 PRKCZQ05513 592 aa16.66■□□□□ 0.26
DDX41-210ENST00000509576 TFCP2Q12800 502 aa16.66■□□□□ 0.26
DDX41-210ENST00000509576 PRRT2Q7Z6L0 340 aaPredicted RBP16.66■□□□□ 0.26
DDX41-210ENST00000509576 NBPF11Q86T75 865 aa16.66■□□□□ 0.26
DDX41-210ENST00000509576 GCC1Q96CN9 775 aa16.66■□□□□ 0.26
DDX41-210ENST00000509576 MAST2Q6P0Q8 1798 aa16.66■□□□□ 0.26
DDX41-210ENST00000509576 A0A1B0GUL7 405 aa16.65■□□□□ 0.26
DDX41-210ENST00000509576 SEMA3EO15041 775 aa16.65■□□□□ 0.26
DDX41-210ENST00000509576 ENTPD3O75355 529 aa16.65■□□□□ 0.26
DDX41-210ENST00000509576 SCYL3Q8IZE3 742 aa16.65■□□□□ 0.26
DDX41-210ENST00000509576 XAGE2Q96GT9 111 aa16.65■□□□□ 0.26
DDX41-210ENST00000509576 ZHX2Q9Y6X8 837 aa16.65■□□□□ 0.26
DDX41-210ENST00000509576 MYPNQ86TC9 1320 aa16.65■□□□□ 0.26
DDX41-210ENST00000509576 CXCL11O14625 94 aa16.64■□□□□ 0.25
DDX41-210ENST00000509576 GNRH1P01148 92 aa16.64■□□□□ 0.25
DDX41-210ENST00000509576 BTDP43251 543 aa16.64■□□□□ 0.25
DDX41-210ENST00000509576 MECOMQ03112 1051 aa16.64■□□□□ 0.25
DDX41-210ENST00000509576 MTX1Q13505 466 aa16.64■□□□□ 0.25
DDX41-210ENST00000509576 FAM163AQ96GL9 167 aaPredicted RBP16.64■□□□□ 0.25
DDX41-210ENST00000509576 MROH7-TTC4A0A0A0MT08 1334 aa16.64■□□□□ 0.25
DDX41-210ENST00000509576 PDS5AQ29RF7 1337 aaKnown RBP16.64■□□□□ 0.25
DDX41-210ENST00000509576 CCL5P13501 91 aa16.63■□□□□ 0.25
DDX41-210ENST00000509576 GRK4P32298 578 aa16.63■□□□□ 0.25
DDX41-210ENST00000509576 PRMT2P55345 433 aa16.63■□□□□ 0.25
DDX41-210ENST00000509576 PICALMQ13492 652 aa16.63■□□□□ 0.25
DDX41-210ENST00000509576 KIF22Q14807 665 aa16.63■□□□□ 0.25
DDX41-210ENST00000509576 ARHGEF6Q15052 776 aa16.63■□□□□ 0.25
DDX41-210ENST00000509576 TBC1D9Q6ZT07 1266 aa16.63■□□□□ 0.25
DDX41-210ENST00000509576 GNL3LQ9NVN8 582 aaKnown RBP16.63■□□□□ 0.25
DDX41-210ENST00000509576 HMG20BQ9P0W2 317 aa16.63■□□□□ 0.25
DDX41-210ENST00000509576 ABCF2Q9UG63 623 aa16.63■□□□□ 0.25
DDX41-210ENST00000509576 GPR75-ASB3A0A0A6YYF3 556 aa16.62■□□□□ 0.25
DDX41-210ENST00000509576 PNMA6EA0A0J9YXQ4 647 aa16.62■□□□□ 0.25
DDX41-210ENST00000509576 FMNL1O95466 1100 aaPredicted RBP16.62■□□□□ 0.25
DDX41-210ENST00000509576 TREML2Q5T2D2 321 aa16.62■□□□□ 0.25
DDX41-210ENST00000509576 API5Q9BZZ5 524 aaKnown RBP16.62■□□□□ 0.25
DDX41-210ENST00000509576 UNC93B1Q9H1C4 597 aa16.62■□□□□ 0.25
DDX41-210ENST00000509576 SRGAP3O43295 1099 aa16.61■□□□□ 0.25
DDX41-210ENST00000509576 GJA8P48165 433 aa16.61■□□□□ 0.25
DDX41-210ENST00000509576 JAG1P78504 1218 aa16.61■□□□□ 0.25
DDX41-210ENST00000509576 SHROOM1Q2M3G4 852 aaPredicted RBP16.61■□□□□ 0.25
DDX41-210ENST00000509576 PARK7Q99497 189 aaKnown RBP16.61■□□□□ 0.25
DDX41-210ENST00000509576 PRO3102Q9H379 93 aa16.61■□□□□ 0.25
DDX41-210ENST00000509576 CT47B1P0C2W7 299 aaPredicted RBP16.6■□□□□ 0.25
DDX41-210ENST00000509576 TRIM27P14373 513 aa16.6■□□□□ 0.25
DDX41-210ENST00000509576 ELNP15502 786 aa16.6■□□□□ 0.25
DDX41-210ENST00000509576 MCAMP43121 646 aa16.6■□□□□ 0.25
DDX41-210ENST00000509576 GADL1Q6ZQY3 521 aa16.6■□□□□ 0.25
DDX41-210ENST00000509576 DZIP1Q86YF9 867 aaKnown RBP16.6■□□□□ 0.25
DDX41-210ENST00000509576 RAET1EQ8TD07 263 aa16.6■□□□□ 0.25
DDX41-210ENST00000509576 NSUN4Q96CB9 384 aaKnown RBP16.6■□□□□ 0.25
DDX41-210ENST00000509576 COL2A1P02458 1487 aaPredicted RBP16.6■□□□□ 0.25
DDX41-210ENST00000509576 TRIM75PA6NK02 468 aa16.59■□□□□ 0.25
DDX41-210ENST00000509576 GJB1P08034 283 aa16.59■□□□□ 0.25
DDX41-210ENST00000509576 FLT3LGP49771 235 aa16.59■□□□□ 0.25
DDX41-210ENST00000509576 COL6A3P12111 3177 aa16.59■□□□□ 0.25
DDX41-210ENST00000509576 MYH1P12882 1939 aa16.58■□□□□ 0.25
DDX41-210ENST00000509576 PEX10O60683 326 aa16.58■□□□□ 0.24
DDX41-210ENST00000509576 CTNND1O60716 968 aaKnown RBP16.58■□□□□ 0.24
DDX41-210ENST00000509576 BCAR3O75815 825 aa16.58■□□□□ 0.24
DDX41-210ENST00000509576 ARID4AP29374 1257 aaPredicted RBP16.58■□□□□ 0.24
DDX41-210ENST00000509576 CHRDL2Q6WN34 429 aa16.58■□□□□ 0.24
DDX41-210ENST00000509576 ADGRA1Q86SQ6 560 aa16.58■□□□□ 0.24
DDX41-210ENST00000509576 ZSCAN29Q8IWY8 852 aaPredicted RBP16.58■□□□□ 0.24
DDX41-210ENST00000509576 ZGPATQ8N5A5 531 aaKnown RBP16.58■□□□□ 0.24
DDX41-210ENST00000509576 RBM27Q9P2N5 1060 aaKnown RBP16.58■□□□□ 0.24
DDX41-210ENST00000509576 FCGRTP55899 365 aa16.57■□□□□ 0.24
DDX41-210ENST00000509576 SPATA5Q8NB90 893 aa16.57■□□□□ 0.24
DDX41-210ENST00000509576 U2AF1L4Q8WU68 220 aaKnown RBP16.57■□□□□ 0.24
DDX41-210ENST00000509576 ARHGAP45Q92619 1136 aa16.57■□□□□ 0.24
DDX41-210ENST00000509576 RNF208Q9H0X6 261 aa16.57■□□□□ 0.24
DDX41-210ENST00000509576 DNAJC18Q9H819 358 aa16.57■□□□□ 0.24
DDX41-210ENST00000509576 PICK1Q9NRD5 415 aa16.57■□□□□ 0.24
DDX41-210ENST00000509576 SLC45A1Q9Y2W3 748 aa16.57■□□□□ 0.24
DDX41-210ENST00000509576 FRMPD3Q5JV73 1810 aa16.56■□□□□ 0.24
DDX41-210ENST00000509576 DDX60LQ5H9U9 1706 aaKnown RBP16.56■□□□□ 0.24
DDX41-210ENST00000509576 ADCY3O60266 1144 aa16.56■□□□□ 0.24
DDX41-210ENST00000509576 TBC1D12O60347 775 aa16.56■□□□□ 0.24
DDX41-210ENST00000509576 NPM3O75607 178 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms