RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 CPA4Q9UI42 421 aa18.94■□□□□ 0.62
TPM3-219ENST00000509409 KCNH4Q9UQ05 1017 aa18.94■□□□□ 0.62
TPM3-219ENST00000509409 ZHX2Q9Y6X8 837 aa18.94■□□□□ 0.62
TPM3-219ENST00000509409 GPR75-ASB3A0A0A6YYF3 556 aa18.93■□□□□ 0.62
TPM3-219ENST00000509409 POTEFA5A3E0 1075 aa18.93■□□□□ 0.62
TPM3-219ENST00000509409 DDTLA6NHG4 134 aaPredicted RBP18.93■□□□□ 0.62
TPM3-219ENST00000509409 PHF20L1A8MW92 1017 aa18.93■□□□□ 0.62
TPM3-219ENST00000509409 CXCL11O14625 94 aa18.93■□□□□ 0.62
TPM3-219ENST00000509409 SURF6O75683 361 aaKnown RBP18.93■□□□□ 0.62
TPM3-219ENST00000509409 SLC9C1Q4G0N8 1177 aa18.93■□□□□ 0.62
TPM3-219ENST00000509409 TTC39AQ5SRH9 613 aa18.93■□□□□ 0.62
TPM3-219ENST00000509409 SH3BP5LQ7L8J4 393 aa18.93■□□□□ 0.62
TPM3-219ENST00000509409 ITPRIPQ8IWB1 547 aa18.93■□□□□ 0.62
TPM3-219ENST00000509409 SCYL3Q8IZE3 742 aa18.93■□□□□ 0.62
TPM3-219ENST00000509409 ARMC5Q96C12 935 aa18.93■□□□□ 0.62
TPM3-219ENST00000509409 ARHGAP39Q9C0H5 1083 aa18.93■□□□□ 0.62
TPM3-219ENST00000509409 C1orf115Q9H7X2 142 aa18.93■□□□□ 0.62
TPM3-219ENST00000509409 PTCH2Q9Y6C5 1203 aa18.93■□□□□ 0.62
TPM3-219ENST00000509409 MYH13Q9UKX3 1938 aa18.93■□□□□ 0.62
TPM3-219ENST00000509409 ARID4AP29374 1257 aaPredicted RBP18.92■□□□□ 0.62
TPM3-219ENST00000509409 LACTBP83111 547 aaPredicted RBP18.92■□□□□ 0.62
TPM3-219ENST00000509409 CCDC158Q5M9N0 1113 aa18.92■□□□□ 0.62
TPM3-219ENST00000509409 NSUN4Q96CB9 384 aaKnown RBP18.92■□□□□ 0.62
TPM3-219ENST00000509409 AK9Q5TCS8 1911 aa18.92■□□□□ 0.62
TPM3-219ENST00000509409 SLURP2P0DP57 97 aa18.91■□□□□ 0.62
TPM3-219ENST00000509409 PTPRAP18433 802 aa18.91■□□□□ 0.62
TPM3-219ENST00000509409 MCAMP43121 646 aa18.91■□□□□ 0.62
TPM3-219ENST00000509409 RHBDL3P58872 404 aa18.91■□□□□ 0.62
TPM3-219ENST00000509409 POLA2Q14181 598 aa18.91■□□□□ 0.62
TPM3-219ENST00000509409 C17orf99Q6UX52 265 aa18.91■□□□□ 0.62
TPM3-219ENST00000509409 NOL10Q9BSC4 688 aaKnown RBP18.91■□□□□ 0.62
TPM3-219ENST00000509409 SNRKQ9NRH2 765 aa18.91■□□□□ 0.62
TPM3-219ENST00000509409 TNRC18O15417 2968 aaPredicted RBP18.91■□□□□ 0.62
TPM3-219ENST00000509409 FMNL1O95466 1100 aaPredicted RBP18.9■□□□□ 0.62
TPM3-219ENST00000509409 MAP4K4O95819 1239 aaPredicted RBP18.9■□□□□ 0.62
TPM3-219ENST00000509409 MYCP01106 439 aaPredicted RBP18.9■□□□□ 0.62
TPM3-219ENST00000509409 SLC4A8Q2Y0W8 1093 aa18.9■□□□□ 0.62
TPM3-219ENST00000509409 TNNI3KQ59H18 835 aa18.9■□□□□ 0.62
TPM3-219ENST00000509409 PRPF38BQ5VTL8 546 aaKnown RBP18.9■□□□□ 0.62
TPM3-219ENST00000509409 GADL1Q6ZQY3 521 aa18.9■□□□□ 0.62
TPM3-219ENST00000509409 FASTKD5Q7L8L6 764 aaKnown RBP18.9■□□□□ 0.62
TPM3-219ENST00000509409 SSH3Q8TE77 659 aa18.9■□□□□ 0.62
TPM3-219ENST00000509409 ZNF384Q8TF68 577 aa18.9■□□□□ 0.62
TPM3-219ENST00000509409 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.9■□□□□ 0.62
TPM3-219ENST00000509409 GPR108Q9NPR9 543 aa18.9■□□□□ 0.62
TPM3-219ENST00000509409 FPGT-TNNI3KV9GXZ4 949 aa18.9■□□□□ 0.62
TPM3-219ENST00000509409 CTNND1O60716 968 aaKnown RBP18.89■□□□□ 0.61
TPM3-219ENST00000509409 GNRH1P01148 92 aa18.89■□□□□ 0.61
TPM3-219ENST00000509409 EN2P19622 333 aaPredicted RBP18.89■□□□□ 0.61
TPM3-219ENST00000509409 HOXD10P28358 340 aa18.89■□□□□ 0.61
TPM3-219ENST00000509409 PSMC4P43686 418 aa18.89■□□□□ 0.61
TPM3-219ENST00000509409 MAP3K10Q02779 954 aa18.89■□□□□ 0.61
TPM3-219ENST00000509409 MOGSQ13724 837 aa18.89■□□□□ 0.61
TPM3-219ENST00000509409 TEX11Q8IYF3 940 aa18.89■□□□□ 0.61
TPM3-219ENST00000509409 ZNF333Q96JL9 665 aa18.89■□□□□ 0.61
TPM3-219ENST00000509409 PARK7Q99497 189 aaKnown RBP18.89■□□□□ 0.61
TPM3-219ENST00000509409 DBNDD2Q9BQY9 259 aa18.89■□□□□ 0.61
TPM3-219ENST00000509409 LAMB1P07942 1786 aa18.88■□□□□ 0.61
TPM3-219ENST00000509409 ZBTB7BO15156 539 aaPredicted RBP18.88■□□□□ 0.61
TPM3-219ENST00000509409 PRMT2P55345 433 aa18.88■□□□□ 0.61
TPM3-219ENST00000509409 NAA16Q6N069 864 aaPredicted RBP18.88■□□□□ 0.61
TPM3-219ENST00000509409 GPAT2Q6NUI2 795 aa18.88■□□□□ 0.61
TPM3-219ENST00000509409 AFG3L2Q9Y4W6 797 aa18.88■□□□□ 0.61
TPM3-219ENST00000509409 ATRNL1Q5VV63 1379 aa18.88■□□□□ 0.61
TPM3-219ENST00000509409 A0A0G2JLL6 359 aaPredicted RBP18.87■□□□□ 0.61
TPM3-219ENST00000509409 TBC1D12O60347 775 aa18.87■□□□□ 0.61
TPM3-219ENST00000509409 NPM3O75607 178 aaKnown RBP18.87■□□□□ 0.61
TPM3-219ENST00000509409 BAG3O95817 575 aa18.87■□□□□ 0.61
TPM3-219ENST00000509409 CYP2C8P10632 490 aa18.87■□□□□ 0.61
TPM3-219ENST00000509409 RLBP1P12271 317 aa18.87■□□□□ 0.61
TPM3-219ENST00000509409 PRRT2Q7Z6L0 340 aaPredicted RBP18.87■□□□□ 0.61
TPM3-219ENST00000509409 SH3TC2Q8TF17 1288 aa18.87■□□□□ 0.61
TPM3-219ENST00000509409 MYH2Q9UKX2 1941 aa18.87■□□□□ 0.61
TPM3-219ENST00000509409 PDE4DIPQ5VU43 2346 aa18.86■□□□□ 0.61
TPM3-219ENST00000509409 RFX7Q2KHR2 1363 aa18.86■□□□□ 0.61
TPM3-219ENST00000509409 TRIM75PA6NK02 468 aa18.86■□□□□ 0.61
TPM3-219ENST00000509409 FAM196BA6NMK8 535 aa18.86■□□□□ 0.61
TPM3-219ENST00000509409 RAET1EQ8TD07 263 aa18.86■□□□□ 0.61
TPM3-219ENST00000509409 SH3RF3Q8TEJ3 882 aaPredicted RBP18.86■□□□□ 0.61
TPM3-219ENST00000509409 CCDC8Q9H0W5 538 aaPredicted RBP18.86■□□□□ 0.61
TPM3-219ENST00000509409 OSBPL5Q9H0X9 879 aaPredicted RBP18.86■□□□□ 0.61
TPM3-219ENST00000509409 AATFQ9NY61 560 aaKnown RBP eCLIP18.86■□□□□ 0.61
TPM3-219ENST00000509409 CCDC84Q86UT8 332 aaPredicted RBP18.85■□□□□ 0.61
TPM3-219ENST00000509409 TRIM47Q96LD4 638 aa18.85■□□□□ 0.61
TPM3-219ENST00000509409 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.85■□□□□ 0.61
TPM3-219ENST00000509409 SRRDQ9UH36 339 aa18.85■□□□□ 0.61
TPM3-219ENST00000509409 NOP58Q9Y2X3 529 aaKnown RBP18.85■□□□□ 0.61
TPM3-219ENST00000509409 SLC34A2O95436 690 aa18.84■□□□□ 0.61
TPM3-219ENST00000509409 CYP2E1P05181 493 aaPredicted RBP18.84■□□□□ 0.61
TPM3-219ENST00000509409 PLCG2P16885 1265 aa18.84■□□□□ 0.61
TPM3-219ENST00000509409 OSBPP22059 807 aa18.84■□□□□ 0.61
TPM3-219ENST00000509409 CTGFP29279 349 aa18.84■□□□□ 0.61
TPM3-219ENST00000509409 ZAP70P43403 619 aa18.84■□□□□ 0.61
TPM3-219ENST00000509409 HTTP42858 3142 aa18.83■□□□□ 0.61
TPM3-219ENST00000509409 FCGRTP55899 365 aa18.83■□□□□ 0.6
TPM3-219ENST00000509409 PANK1Q8TE04 598 aa18.83■□□□□ 0.6
TPM3-219ENST00000509409 TGFBRAP1Q8WUH2 860 aa18.83■□□□□ 0.6
TPM3-219ENST00000509409 BIN2Q9UBW5 565 aaPredicted RBP18.83■□□□□ 0.6
TPM3-219ENST00000509409 MYPNQ86TC9 1320 aa18.82■□□□□ 0.6
TPM3-219ENST00000509409 ADGRA2Q96PE1 1338 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms