RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 KCNH4Q9UQ05 1017 aa17.98■□□□□ 0.47
HMGCL-208ENST00000509389 PTCH2Q9Y6C5 1203 aa17.98■□□□□ 0.47
HMGCL-208ENST00000509389 ENTPD3O75355 529 aa17.97■□□□□ 0.47
HMGCL-208ENST00000509389 ATRNL1Q5VV63 1379 aa17.97■□□□□ 0.47
HMGCL-208ENST00000509389 SPTY2D1Q68D10 685 aaPredicted RBP17.97■□□□□ 0.47
HMGCL-208ENST00000509389 ANKRD23Q86SG2 305 aa17.97■□□□□ 0.47
HMGCL-208ENST00000509389 FAM163AQ96GL9 167 aaPredicted RBP17.97■□□□□ 0.47
HMGCL-208ENST00000509389 ARHGAP39Q9C0H5 1083 aa17.97■□□□□ 0.47
HMGCL-208ENST00000509389 ZBTB40Q9NUA8 1239 aa17.97■□□□□ 0.47
HMGCL-208ENST00000509389 RFX7Q2KHR2 1363 aa17.96■□□□□ 0.47
HMGCL-208ENST00000509389 GNAI2P04899 355 aa17.96■□□□□ 0.47
HMGCL-208ENST00000509389 LACTBP83111 547 aaPredicted RBP17.96■□□□□ 0.47
HMGCL-208ENST00000509389 SH3BP5LQ7L8J4 393 aa17.96■□□□□ 0.47
HMGCL-208ENST00000509389 SLF2Q8IX21 1173 aa17.96■□□□□ 0.47
HMGCL-208ENST00000509389 ZNF333Q96JL9 665 aa17.96■□□□□ 0.47
HMGCL-208ENST00000509389 NEUROD6Q96NK8 337 aa17.96■□□□□ 0.47
HMGCL-208ENST00000509389 CENPFP49454 3210 aa17.96■□□□□ 0.46
HMGCL-208ENST00000509389 PHF20L1A8MW92 1017 aa17.95■□□□□ 0.46
HMGCL-208ENST00000509389 PDHXO00330 501 aa17.95■□□□□ 0.46
HMGCL-208ENST00000509389 ZBTB7BO15156 539 aaPredicted RBP17.95■□□□□ 0.46
HMGCL-208ENST00000509389 MOGSQ13724 837 aa17.95■□□□□ 0.46
HMGCL-208ENST00000509389 KIF22Q14807 665 aa17.95■□□□□ 0.46
HMGCL-208ENST00000509389 C17orf99Q6UX52 265 aa17.95■□□□□ 0.46
HMGCL-208ENST00000509389 ITPRIPQ8IWB1 547 aa17.95■□□□□ 0.46
HMGCL-208ENST00000509389 MROH7-TTC4A0A0A0MT08 1334 aa17.94■□□□□ 0.46
HMGCL-208ENST00000509389 PNMA6EA0A0J9YXQ4 647 aa17.94■□□□□ 0.46
HMGCL-208ENST00000509389 EN2P19622 333 aaPredicted RBP17.94■□□□□ 0.46
HMGCL-208ENST00000509389 BTDP43251 543 aa17.94■□□□□ 0.46
HMGCL-208ENST00000509389 MECOMQ03112 1051 aa17.94■□□□□ 0.46
HMGCL-208ENST00000509389 SLC9C1Q4G0N8 1177 aa17.94■□□□□ 0.46
HMGCL-208ENST00000509389 B4GALNT3Q6L9W6 998 aa17.94■□□□□ 0.46
HMGCL-208ENST00000509389 ERICH6Q7L0X2 663 aa17.94■□□□□ 0.46
HMGCL-208ENST00000509389 ZNF384Q8TF68 577 aa17.94■□□□□ 0.46
HMGCL-208ENST00000509389 DDX4Q9NQI0 724 aaKnown RBP17.94■□□□□ 0.46
HMGCL-208ENST00000509389 HMG20BQ9P0W2 317 aa17.94■□□□□ 0.46
HMGCL-208ENST00000509389 CPA4Q9UI42 421 aa17.94■□□□□ 0.46
HMGCL-208ENST00000509389 ADGRA2Q96PE1 1338 aa17.93■□□□□ 0.46
HMGCL-208ENST00000509389 DDTLA6NHG4 134 aaPredicted RBP17.93■□□□□ 0.46
HMGCL-208ENST00000509389 MAP3K10Q02779 954 aa17.93■□□□□ 0.46
HMGCL-208ENST00000509389 G3BP1Q13283 466 aaKnown RBP eCLIP17.93■□□□□ 0.46
HMGCL-208ENST00000509389 NBPF11Q86T75 865 aa17.93■□□□□ 0.46
HMGCL-208ENST00000509389 ZSCAN29Q8IWY8 852 aaPredicted RBP17.93■□□□□ 0.46
HMGCL-208ENST00000509389 SCYL3Q8IZE3 742 aa17.93■□□□□ 0.46
HMGCL-208ENST00000509389 CCDC136Q96JN2 1154 aa17.93■□□□□ 0.46
HMGCL-208ENST00000509389 TMEM106CQ9BVX2 250 aa17.93■□□□□ 0.46
HMGCL-208ENST00000509389 CHMP4BQ9H444 224 aaKnown RBP17.93■□□□□ 0.46
HMGCL-208ENST00000509389 GPR75-ASB3A0A0A6YYF3 556 aa17.92■□□□□ 0.46
HMGCL-208ENST00000509389 CXCL11O14625 94 aa17.92■□□□□ 0.46
HMGCL-208ENST00000509389 GNRH1P01148 92 aa17.92■□□□□ 0.46
HMGCL-208ENST00000509389 SLURP2P0DP57 97 aa17.92■□□□□ 0.46
HMGCL-208ENST00000509389 CTGFP29279 349 aa17.92■□□□□ 0.46
HMGCL-208ENST00000509389 RHBDL3P58872 404 aa17.92■□□□□ 0.46
HMGCL-208ENST00000509389 PICALMQ13492 652 aa17.92■□□□□ 0.46
HMGCL-208ENST00000509389 GORABQ5T7V8 394 aa17.92■□□□□ 0.46
HMGCL-208ENST00000509389 PI16Q6UXB8 463 aa17.92■□□□□ 0.46
HMGCL-208ENST00000509389 SPATA5Q8NB90 893 aa17.92■□□□□ 0.46
HMGCL-208ENST00000509389 ECM2O94769 699 aaPredicted RBP17.91■□□□□ 0.46
HMGCL-208ENST00000509389 PTPRAP18433 802 aa17.91■□□□□ 0.46
HMGCL-208ENST00000509389 ARID4AP29374 1257 aaPredicted RBP17.91■□□□□ 0.46
HMGCL-208ENST00000509389 GPAT2Q6NUI2 795 aa17.91■□□□□ 0.46
HMGCL-208ENST00000509389 TBC1D9Q6ZT07 1266 aa17.91■□□□□ 0.46
HMGCL-208ENST00000509389 PICK1Q9NRD5 415 aa17.91■□□□□ 0.46
HMGCL-208ENST00000509389 ZHX2Q9Y6X8 837 aa17.91■□□□□ 0.46
HMGCL-208ENST00000509389 DOCK1Q14185 1865 aa17.91■□□□□ 0.46
HMGCL-208ENST00000509389 PHIPQ8WWQ0 1821 aa17.91■□□□□ 0.46
HMGCL-208ENST00000509389 PRMT2P55345 433 aa17.91■□□□□ 0.46
HMGCL-208ENST00000509389 SH3TC2Q8TF17 1288 aa17.91■□□□□ 0.46
HMGCL-208ENST00000509389 NSUN4Q96CB9 384 aaKnown RBP17.91■□□□□ 0.46
HMGCL-208ENST00000509389 PCDHB15Q9Y5E8 787 aa17.91■□□□□ 0.46
HMGCL-208ENST00000509389 PTPRFP10586 1907 aa17.9■□□□□ 0.46
HMGCL-208ENST00000509389 LDHCP07864 332 aa17.9■□□□□ 0.46
HMGCL-208ENST00000509389 MCAMP43121 646 aa17.9■□□□□ 0.46
HMGCL-208ENST00000509389 PSMC4P43686 418 aa17.9■□□□□ 0.46
HMGCL-208ENST00000509389 GSTO1P78417 241 aa17.9■□□□□ 0.46
HMGCL-208ENST00000509389 TRIM47Q96LD4 638 aa17.9■□□□□ 0.46
HMGCL-208ENST00000509389 AFG3L2Q9Y4W6 797 aa17.9■□□□□ 0.46
HMGCL-208ENST00000509389 A0A0G2JLL6 359 aaPredicted RBP17.89■□□□□ 0.45
HMGCL-208ENST00000509389 CTNND1O60716 968 aaKnown RBP17.89■□□□□ 0.45
HMGCL-208ENST00000509389 NPM3O75607 178 aaKnown RBP17.89■□□□□ 0.45
HMGCL-208ENST00000509389 MYCP01106 439 aaPredicted RBP17.89■□□□□ 0.45
HMGCL-208ENST00000509389 CYP2C8P10632 490 aa17.89■□□□□ 0.45
HMGCL-208ENST00000509389 POLA2Q14181 598 aa17.89■□□□□ 0.45
HMGCL-208ENST00000509389 SLC4A8Q2Y0W8 1093 aa17.89■□□□□ 0.45
HMGCL-208ENST00000509389 PRRT2Q7Z6L0 340 aaPredicted RBP17.89■□□□□ 0.45
HMGCL-208ENST00000509389 PARK7Q99497 189 aaKnown RBP17.89■□□□□ 0.45
HMGCL-208ENST00000509389 RAI14Q9P0K7 980 aa17.89■□□□□ 0.45
HMGCL-208ENST00000509389 SRRDQ9UH36 339 aa17.89■□□□□ 0.45
HMGCL-208ENST00000509389 BRCA2P51587 3418 aa17.88■□□□□ 0.45
HMGCL-208ENST00000509389 MKI67P46013 3256 aaKnown RBP17.88■□□□□ 0.45
HMGCL-208ENST00000509389 TBC1D12O60347 775 aa17.88■□□□□ 0.45
HMGCL-208ENST00000509389 FMNL1O95466 1100 aaPredicted RBP17.88■□□□□ 0.45
HMGCL-208ENST00000509389 MAP4K4O95819 1239 aaPredicted RBP17.88■□□□□ 0.45
HMGCL-208ENST00000509389 UQCRFS1P1P0C7P4 283 aa17.88■□□□□ 0.45
HMGCL-208ENST00000509389 BCRP11274 1271 aa17.88■□□□□ 0.45
HMGCL-208ENST00000509389 OSBPP22059 807 aa17.88■□□□□ 0.45
HMGCL-208ENST00000509389 FASTKD5Q7L8L6 764 aaKnown RBP17.88■□□□□ 0.45
HMGCL-208ENST00000509389 MGAMO43451 1857 aa17.88■□□□□ 0.45
HMGCL-208ENST00000509389 HOXD10P28358 340 aa17.87■□□□□ 0.45
HMGCL-208ENST00000509389 ATP8B2P98198 1209 aa17.87■□□□□ 0.45
HMGCL-208ENST00000509389 HDAC1Q13547 482 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms