RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 INPP5BP32019 993 aa13.49□□□□□ -0.25
RNF4-212ENST00000509258 TBC1D9Q6ZT07 1266 aa13.49□□□□□ -0.25
RNF4-212ENST00000509258 SSH3Q8TE77 659 aa13.49□□□□□ -0.25
RNF4-212ENST00000509258 FAM151AQ8WW52 585 aa13.49□□□□□ -0.25
RNF4-212ENST00000509258 NEUROD6Q96NK8 337 aa13.49□□□□□ -0.25
RNF4-212ENST00000509258 HMG20BQ9P0W2 317 aa13.49□□□□□ -0.25
RNF4-212ENST00000509258 MCAMP43121 646 aa13.48□□□□□ -0.25
RNF4-212ENST00000509258 PRMT2P55345 433 aa13.48□□□□□ -0.25
RNF4-212ENST00000509258 ATP8B2P98198 1209 aa13.48□□□□□ -0.25
RNF4-212ENST00000509258 SH3BP5LQ7L8J4 393 aa13.48□□□□□ -0.25
RNF4-212ENST00000509258 ITPRIPQ8IWB1 547 aa13.48□□□□□ -0.25
RNF4-212ENST00000509258 DDX4Q9NQI0 724 aaKnown RBP13.48□□□□□ -0.25
RNF4-212ENST00000509258 USP40Q9NVE5 1235 aa13.48□□□□□ -0.25
RNF4-212ENST00000509258 PDS5AQ29RF7 1337 aaKnown RBP13.47□□□□□ -0.25
RNF4-212ENST00000509258 ARID4AP29374 1257 aaPredicted RBP13.47□□□□□ -0.25
RNF4-212ENST00000509258 SLC4A8Q2Y0W8 1093 aa13.47□□□□□ -0.25
RNF4-212ENST00000509258 ANKRD23Q86SG2 305 aa13.47□□□□□ -0.25
RNF4-212ENST00000509258 ZGPATQ8N5A5 531 aaKnown RBP13.47□□□□□ -0.25
RNF4-212ENST00000509258 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.47□□□□□ -0.25
RNF4-212ENST00000509258 DBNDD2Q9BQY9 259 aa13.47□□□□□ -0.25
RNF4-212ENST00000509258 ARHGAP39Q9C0H5 1083 aa13.47□□□□□ -0.25
RNF4-212ENST00000509258 TLR7Q9NYK1 1049 aaKnown RBP13.47□□□□□ -0.25
RNF4-212ENST00000509258 ABCF2Q9UG63 623 aa13.47□□□□□ -0.25
RNF4-212ENST00000509258 KCNH4Q9UQ05 1017 aa13.47□□□□□ -0.25
RNF4-212ENST00000509258 MGAMO43451 1857 aa13.46□□□□□ -0.25
RNF4-212ENST00000509258 RGS3P49796 1198 aa13.46□□□□□ -0.25
RNF4-212ENST00000509258 MECOMQ03112 1051 aa13.46□□□□□ -0.25
RNF4-212ENST00000509258 G3BP1Q13283 466 aaKnown RBP eCLIP13.46□□□□□ -0.25
RNF4-212ENST00000509258 MVPQ14764 893 aaKnown RBP13.46□□□□□ -0.25
RNF4-212ENST00000509258 TNNI3KQ59H18 835 aa13.46□□□□□ -0.25
RNF4-212ENST00000509258 HABP4Q5JVS0 413 aaKnown RBP13.46□□□□□ -0.25
RNF4-212ENST00000509258 NOL9Q5SY16 702 aaKnown RBP13.46□□□□□ -0.25
RNF4-212ENST00000509258 FTSJ3Q8IY81 847 aaKnown RBP13.46□□□□□ -0.25
RNF4-212ENST00000509258 ZNF112Q9UJU3 913 aa13.46□□□□□ -0.25
RNF4-212ENST00000509258 AKAP2Q9Y2D5 859 aa13.46□□□□□ -0.25
RNF4-212ENST00000509258 FPGT-TNNI3KV9GXZ4 949 aa13.46□□□□□ -0.25
RNF4-212ENST00000509258 MROH7-TTC4A0A0A0MT08 1334 aa13.45□□□□□ -0.26
RNF4-212ENST00000509258 MYH1P12882 1939 aa13.45□□□□□ -0.26
RNF4-212ENST00000509258 PDHXO00330 501 aa13.45□□□□□ -0.26
RNF4-212ENST00000509258 BTDP43251 543 aa13.45□□□□□ -0.26
RNF4-212ENST00000509258 RHBDL3P58872 404 aa13.45□□□□□ -0.26
RNF4-212ENST00000509258 CEP85Q6P2H3 762 aa13.45□□□□□ -0.26
RNF4-212ENST00000509258 C17orf99Q6UX52 265 aa13.45□□□□□ -0.26
RNF4-212ENST00000509258 SLF2Q8IX21 1173 aa13.45□□□□□ -0.26
RNF4-212ENST00000509258 SPATA5Q8NB90 893 aa13.45□□□□□ -0.26
RNF4-212ENST00000509258 SH3TC2Q8TF17 1288 aa13.45□□□□□ -0.26
RNF4-212ENST00000509258 PARK7Q99497 189 aaKnown RBP13.45□□□□□ -0.26
RNF4-212ENST00000509258 SNRKQ9NRH2 765 aa13.45□□□□□ -0.26
RNF4-212ENST00000509258 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.45□□□□□ -0.26
RNF4-212ENST00000509258 NOP58Q9Y2X3 529 aaKnown RBP13.45□□□□□ -0.26
RNF4-212ENST00000509258 DOCK3Q8IZD9 2030 aa13.45□□□□□ -0.26
RNF4-212ENST00000509258 ADGRA2Q96PE1 1338 aa13.44□□□□□ -0.26
RNF4-212ENST00000509258 DDTLA6NHG4 134 aaPredicted RBP13.44□□□□□ -0.26
RNF4-212ENST00000509258 SURF6O75683 361 aaKnown RBP13.44□□□□□ -0.26
RNF4-212ENST00000509258 MYCP01106 439 aaPredicted RBP13.44□□□□□ -0.26
RNF4-212ENST00000509258 DZIP1Q86YF9 867 aaKnown RBP13.44□□□□□ -0.26
RNF4-212ENST00000509258 NSUN4Q96CB9 384 aaKnown RBP13.44□□□□□ -0.26
RNF4-212ENST00000509258 FAM163AQ96GL9 167 aaPredicted RBP13.44□□□□□ -0.26
RNF4-212ENST00000509258 IDI2Q9BXS1 227 aa13.44□□□□□ -0.26
RNF4-212ENST00000509258 CPA4Q9UI42 421 aa13.44□□□□□ -0.26
RNF4-212ENST00000509258 DBNLQ9UJU6 430 aaKnown RBP13.44□□□□□ -0.26
RNF4-212ENST00000509258 CEP290O15078 2479 aa13.44□□□□□ -0.26
RNF4-212ENST00000509258 GPR75-ASB3A0A0A6YYF3 556 aa13.43□□□□□ -0.26
RNF4-212ENST00000509258 PHF20L1A8MW92 1017 aa13.43□□□□□ -0.26
RNF4-212ENST00000509258 HOXD10P28358 340 aa13.43□□□□□ -0.26
RNF4-212ENST00000509258 PSMC4P43686 418 aa13.43□□□□□ -0.26
RNF4-212ENST00000509258 MOGSQ13724 837 aa13.43□□□□□ -0.26
RNF4-212ENST00000509258 ERICH6Q7L0X2 663 aa13.43□□□□□ -0.26
RNF4-212ENST00000509258 ADGRA1Q86SQ6 560 aa13.43□□□□□ -0.26
RNF4-212ENST00000509258 EAF2Q96CJ1 260 aaPredicted RBP13.43□□□□□ -0.26
RNF4-212ENST00000509258 TRIM47Q96LD4 638 aa13.43□□□□□ -0.26
RNF4-212ENST00000509258 SRRDQ9UH36 339 aa13.43□□□□□ -0.26
RNF4-212ENST00000509258 NDUFB9Q9Y6M9 179 aa13.43□□□□□ -0.26
RNF4-212ENST00000509258 FAM196BA6NMK8 535 aa13.42□□□□□ -0.26
RNF4-212ENST00000509258 CXCL11O14625 94 aa13.42□□□□□ -0.26
RNF4-212ENST00000509258 ENTPD3O75355 529 aa13.42□□□□□ -0.26
RNF4-212ENST00000509258 FMNL1O95466 1100 aaPredicted RBP13.42□□□□□ -0.26
RNF4-212ENST00000509258 PICALMQ13492 652 aa13.42□□□□□ -0.26
RNF4-212ENST00000509258 CCDC84Q86UT8 332 aaPredicted RBP13.42□□□□□ -0.26
RNF4-212ENST00000509258 SIRT2Q8IXJ6 389 aa13.42□□□□□ -0.26
RNF4-212ENST00000509258 RAET1EQ8TD07 263 aa13.42□□□□□ -0.26
RNF4-212ENST00000509258 CCDC8Q9H0W5 538 aaPredicted RBP13.42□□□□□ -0.26
RNF4-212ENST00000509258 GPR108Q9NPR9 543 aa13.42□□□□□ -0.26
RNF4-212ENST00000509258 PIH1D3Q9NQM4 214 aaKnown RBP13.42□□□□□ -0.26
RNF4-212ENST00000509258 PICK1Q9NRD5 415 aa13.42□□□□□ -0.26
RNF4-212ENST00000509258 EXOC6BQ9Y2D4 811 aa13.42□□□□□ -0.26
RNF4-212ENST00000509258 MYPNQ86TC9 1320 aa13.41□□□□□ -0.26
RNF4-212ENST00000509258 MYH7P12883 1935 aa13.41□□□□□ -0.26
RNF4-212ENST00000509258 LOC285556D6RIA3 1793 aa13.41□□□□□ -0.26
RNF4-212ENST00000509258 ECM2O94769 699 aaPredicted RBP13.41□□□□□ -0.26
RNF4-212ENST00000509258 CYP2E1P05181 493 aaPredicted RBP13.41□□□□□ -0.26
RNF4-212ENST00000509258 OSBPP22059 807 aa13.41□□□□□ -0.26
RNF4-212ENST00000509258 CTGFP29279 349 aa13.41□□□□□ -0.26
RNF4-212ENST00000509258 OS9Q13438 667 aaPredicted RBP13.41□□□□□ -0.26
RNF4-212ENST00000509258 RRP1BQ14684 758 aaKnown RBP13.41□□□□□ -0.26
RNF4-212ENST00000509258 GORABQ5T7V8 394 aa13.41□□□□□ -0.26
RNF4-212ENST00000509258 C20orf194Q5TEA3 1177 aa13.41□□□□□ -0.26
RNF4-212ENST00000509258 SPTY2D1Q68D10 685 aaPredicted RBP13.41□□□□□ -0.26
RNF4-212ENST00000509258 SCYL3Q8IZE3 742 aa13.41□□□□□ -0.26
RNF4-212ENST00000509258 NKX2-3Q8TAU0 364 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms