RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 TRPM2O94759 1503 aa11.24□□□□□ -0.61
PFDN1-202ENST00000507185 F8W735 103 aaPredicted RBP11.23□□□□□ -0.61
PFDN1-202ENST00000507185 FKBP4Q02790 459 aaKnown RBP eCLIP11.23□□□□□ -0.61
PFDN1-202ENST00000507185 NUP155O75694 1391 aa11.23□□□□□ -0.61
PFDN1-202ENST00000507185 PNPLA6Q8IY17 1366 aa11.23□□□□□ -0.61
PFDN1-202ENST00000507185 MST1RQ04912 1400 aa11.22□□□□□ -0.61
PFDN1-202ENST00000507185 SHPRHQ149N8 1683 aa11.22□□□□□ -0.61
PFDN1-202ENST00000507185 GCC2Q8IWJ2 1684 aa11.22□□□□□ -0.61
PFDN1-202ENST00000507185 GALNT11Q8NCW6 608 aa11.22□□□□□ -0.61
PFDN1-202ENST00000507185 SETD5Q9C0A6 1442 aa11.22□□□□□ -0.61
PFDN1-202ENST00000507185 SH2B1Q9NRF2 756 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-202ENST00000507185 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-202ENST00000507185 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-202ENST00000507185 TMEM131LA2VDJ0 1609 aa11.21□□□□□ -0.61
PFDN1-202ENST00000507185 DIP2AQ14689 1571 aa11.21□□□□□ -0.61
PFDN1-202ENST00000507185 ADGRL2O95490 1459 aa11.21□□□□□ -0.61
PFDN1-202ENST00000507185 SCO2A0A1W2PP80 73 aa11.21□□□□□ -0.61
PFDN1-202ENST00000507185 CD68P34810 354 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-202ENST00000507185 USP5P45974 858 aa11.21□□□□□ -0.61
PFDN1-202ENST00000507185 TMCO4Q5TGY1 634 aa11.21□□□□□ -0.61
PFDN1-202ENST00000507185 ADAMTSL4Q6UY14 1074 aa11.21□□□□□ -0.61
PFDN1-202ENST00000507185 GZF1Q9H116 711 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-202ENST00000507185 ANO2Q9NQ90 1003 aa11.21□□□□□ -0.61
PFDN1-202ENST00000507185 TRPC5Q9UL62 973 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-202ENST00000507185 USTQ9Y2C2 406 aa11.21□□□□□ -0.61
PFDN1-202ENST00000507185 DCCP43146 1447 aa11.2□□□□□ -0.62
PFDN1-202ENST00000507185 METP08581 1390 aa11.2□□□□□ -0.62
PFDN1-202ENST00000507185 FSCN2O14926 492 aa11.2□□□□□ -0.62
PFDN1-202ENST00000507185 EPHA1P21709 976 aa11.2□□□□□ -0.62
PFDN1-202ENST00000507185 EHHADHQ08426 723 aa11.2□□□□□ -0.62
PFDN1-202ENST00000507185 B4GALNT3Q6L9W6 998 aa11.2□□□□□ -0.62
PFDN1-202ENST00000507185 DZIP1LQ8IYY4 767 aaKnown RBP11.2□□□□□ -0.62
PFDN1-202ENST00000507185 CARD10Q9BWT7 1032 aa11.2□□□□□ -0.62
PFDN1-202ENST00000507185 ADAM19Q9H013 955 aa11.2□□□□□ -0.62
PFDN1-202ENST00000507185 CHD2O14647 1828 aaKnown RBP11.2□□□□□ -0.62
PFDN1-202ENST00000507185 ACPPP15309 386 aa11.19□□□□□ -0.62
PFDN1-202ENST00000507185 CABP4P57796 275 aa11.19□□□□□ -0.62
PFDN1-202ENST00000507185 ZNF211Q13398 564 aaPredicted RBP11.19□□□□□ -0.62
PFDN1-202ENST00000507185 FOXD4L6Q3SYB3 417 aaPredicted RBP11.19□□□□□ -0.62
PFDN1-202ENST00000507185 FOXD4L3Q6VB84 417 aaPredicted RBP11.19□□□□□ -0.62
PFDN1-202ENST00000507185 AGGF1Q8N302 714 aaeCLIP11.19□□□□□ -0.62
PFDN1-202ENST00000507185 KLHL23Q8NBE8 558 aa11.19□□□□□ -0.62
PFDN1-202ENST00000507185 RGS22Q8NE09 1264 aa11.19□□□□□ -0.62
PFDN1-202ENST00000507185 CHRDQ9H2X0 955 aa11.19□□□□□ -0.62
PFDN1-202ENST00000507185 DZANK1Q9NVP4 752 aa11.19□□□□□ -0.62
PFDN1-202ENST00000507185 PDE2AO00408 941 aaPredicted RBP11.18□□□□□ -0.62
PFDN1-202ENST00000507185 PHACTR2O75167 634 aa11.18□□□□□ -0.62
PFDN1-202ENST00000507185 GLB1P16278 677 aa11.18□□□□□ -0.62
PFDN1-202ENST00000507185 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.18□□□□□ -0.62
PFDN1-202ENST00000507185 ORAI2Q96SN7 254 aa11.18□□□□□ -0.62
PFDN1-202ENST00000507185 ADGRL3Q9HAR2 1447 aa11.18□□□□□ -0.62
PFDN1-202ENST00000507185 FZD6O60353 706 aa11.17□□□□□ -0.62
PFDN1-202ENST00000507185 TNFRSF21O75509 655 aa11.17□□□□□ -0.62
PFDN1-202ENST00000507185 XPCQ01831 940 aaPredicted RBP11.17□□□□□ -0.62
PFDN1-202ENST00000507185 PRR23CQ6ZRP0 262 aa11.17□□□□□ -0.62
PFDN1-202ENST00000507185 SNX29Q8TEQ0 813 aa11.17□□□□□ -0.62
PFDN1-202ENST00000507185 SEC31BQ9NQW1 1179 aa11.17□□□□□ -0.62
PFDN1-202ENST00000507185 KCNK4Q9NYG8 393 aa11.17□□□□□ -0.62
PFDN1-202ENST00000507185 H3BRJ5 948 aa11.16□□□□□ -0.62
PFDN1-202ENST00000507185 NFKBIEO00221 500 aa11.16□□□□□ -0.62
PFDN1-202ENST00000507185 TRPA1O75762 1119 aa11.16□□□□□ -0.62
PFDN1-202ENST00000507185 ACAD11Q709F0 780 aa11.16□□□□□ -0.62
PFDN1-202ENST00000507185 C1orf167Q5SNV9 1468 aa11.15□□□□□ -0.62
PFDN1-202ENST00000507185 MYO5BQ9ULV0 1848 aa11.15□□□□□ -0.62
PFDN1-202ENST00000507185 EREGO14944 169 aa11.15□□□□□ -0.62
PFDN1-202ENST00000507185 WISP1O95388 367 aa11.15□□□□□ -0.62
PFDN1-202ENST00000507185 MFAP1P55081 439 aaKnown RBP11.15□□□□□ -0.62
PFDN1-202ENST00000507185 DUOXA2Q1HG44 320 aa11.15□□□□□ -0.62
PFDN1-202ENST00000507185 Q6ZS46 218 aa11.15□□□□□ -0.62
PFDN1-202ENST00000507185 OSMRQ99650 979 aa11.15□□□□□ -0.62
PFDN1-202ENST00000507185 CCDC87Q9NVE4 849 aa11.15□□□□□ -0.62
PFDN1-202ENST00000507185 SRCAPQ6ZRS2 3230 aa11.15□□□□□ -0.62
PFDN1-202ENST00000507185 EDN3P14138 238 aa11.14□□□□□ -0.63
PFDN1-202ENST00000507185 WNT8BQ93098 351 aa11.14□□□□□ -0.63
PFDN1-202ENST00000507185 KLHDC7BQ96G42 594 aa11.14□□□□□ -0.63
PFDN1-202ENST00000507185 HHIPQ96QV1 700 aa11.14□□□□□ -0.63
PFDN1-202ENST00000507185 FOXD3Q9UJU5 478 aaPredicted RBP11.14□□□□□ -0.63
PFDN1-202ENST00000507185 UNC13BO14795 1591 aa11.14□□□□□ -0.63
PFDN1-202ENST00000507185 TM4SF5O14894 197 aa11.13□□□□□ -0.63
PFDN1-202ENST00000507185 TMEM102Q8N9M5 508 aaPredicted RBP11.13□□□□□ -0.63
PFDN1-202ENST00000507185 CEP41Q9BYV8 373 aa11.13□□□□□ -0.63
PFDN1-202ENST00000507185 EGFL7Q9UHF1 273 aa11.13□□□□□ -0.63
PFDN1-202ENST00000507185 SETBP1Q9Y6X0 1596 aa11.12□□□□□ -0.63
PFDN1-202ENST00000507185 DDX3YO15523 660 aaKnown RBP11.12□□□□□ -0.63
PFDN1-202ENST00000507185 GJD3Q8N144 294 aa11.12□□□□□ -0.63
PFDN1-202ENST00000507185 ZKSCAN3Q9BRR0 538 aa11.12□□□□□ -0.63
PFDN1-202ENST00000507185 E9PCH4 1651 aa11.11□□□□□ -0.63
PFDN1-202ENST00000507185 ATRNO75882 1429 aa11.11□□□□□ -0.63
PFDN1-202ENST00000507185 PTCH1Q13635 1447 aa11.11□□□□□ -0.63
PFDN1-202ENST00000507185 ICMTO60725 284 aa11.11□□□□□ -0.63
PFDN1-202ENST00000507185 ARTNQ5T4W7 220 aa11.11□□□□□ -0.63
PFDN1-202ENST00000507185 SLC7A3Q8WY07 619 aa11.11□□□□□ -0.63
PFDN1-202ENST00000507185 NXPE3Q969Y0 559 aa11.11□□□□□ -0.63
PFDN1-202ENST00000507185 UBL7Q96S82 380 aaPredicted RBP11.11□□□□□ -0.63
PFDN1-202ENST00000507185 ZFP64Q9NPA5 681 aa11.11□□□□□ -0.63
PFDN1-202ENST00000507185 OSGEPQ9NPF4 335 aa11.11□□□□□ -0.63
PFDN1-202ENST00000507185 ROBO2Q9HCK4 1378 aa11.11□□□□□ -0.63
PFDN1-202ENST00000507185 NPHP3Q7Z494 1330 aa11.1□□□□□ -0.63
PFDN1-202ENST00000507185 NHSL1Q5SYE7 1610 aa11.1□□□□□ -0.63
PFDN1-202ENST00000507185 ADAM11O75078 769 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms